Homologs of rpoD from Escherichia coli BW25113

rpoD: RNA polymerase sigma factor (NCBI)
SEED: RNA polymerase sigma factor RpoD
KEGG: RNA polymerase primary sigma factor

Top 250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Escherichia coli BW25113 b3067 rpoD RNA polymerase sigma factor (NCBI) no data 100 100
o Escherichia coli BL21 ECD_02937 RNA polymerase, sigma 70 (sigma D) factor no data 100 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00635 RNA polymerase sigma factor RpoD no data 100 100
o Escherichia coli ECOR27 NOLOHH_10445 rpoD RNA polymerase sigma factor RpoD no data 100 100
o Escherichia coli ECOR38 HEPCGN_17510 rpoD RNA polymerase sigma factor RpoD no data 100 100
o Escherichia coli ECRC100 OKFHMN_18655 rpoD RNA polymerase sigma factor RpoD no data 100 100
o Escherichia coli ECRC101 MCAODC_09170 rpoD RNA polymerase sigma factor RpoD no data 100 100
o Escherichia coli ECRC102 NIAGMN_16420 rpoD RNA polymerase sigma factor RpoD no data 100 100
o Escherichia coli ECRC62 BNILDI_01070 rpoD RNA polymerase sigma factor RpoD no data 100 100
o Escherichia coli ECRC98 JDDGAC_22290 rpoD RNA polymerase sigma factor RpoD no data 100 100
o Escherichia coli ECRC99 KEDOAH_09490 rpoD RNA polymerase sigma factor RpoD no data 100 100
o Escherichia fergusonii Becca EFB2_00744 RNA polymerase sigma factor RpoD no data 99 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3177 RNA polymerase sigma factor RpoD no data 97 100
o Enterobacter asburiae PDN3 EX28DRAFT_3102 RNA polymerase, sigma 70 subunit, RpoD no data 96 100
o Enterobacter sp. TBS_079 MPMX20_03909 RNA polymerase sigma factor RpoD no data 96 100
o Klebsiella michiganensis M5al BWI76_RS24555 RNA polymerase sigma factor RpoD no data 96 100
o Klebsiella pneumoniae MRSN742743 GJGHJB_00641 rpoD RNA polymerase sigma factor RpoD no data 96 100
o Klebsiella pneumoniae MKP103 KDGMDA_05365 RNA polymerase sigma factor RpoD no data 96 100
o Serratia liquefaciens MT49 IAI46_22125 RNA polymerase sigma factor RpoD no data 91 100
o Pectobacterium carotovorum WPP14 HER17_RS18415 RNA polymerase sigma factor RpoD no data 92 100
o Erwinia amylovora T8 OLJFJH_07585 RNA polymerase sigma factor RpoD no data 93 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS03290 rpoD RNA polymerase sigma factor RpoD no data 91 100
o Pantoea sp. MT58 IAI47_03050 RNA polymerase sigma factor RpoD no data 90 100
o Rahnella sp. WP5 EX31_RS08195 RNA polymerase sigma factor RpoD no data 91 100
o Erwinia tracheiphila SCR3 LU632_RS20725 rpoD RNA polymerase sigma factor RpoD no data 91 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_14330 rpoD RNA polymerase sigma factor RpoD no data 91 100
o Dickeya dadantii 3937 DDA3937_RS02945 RNA polymerase sigma factor RpoD no data 90 100
o Dickeya dianthicola ME23 DZA65_RS03105 RNA polymerase sigma factor RpoD no data 90 100
o Dickeya dianthicola 67-19 HGI48_RS03110 RNA polymerase sigma factor RpoD no data 90 100
o Shewanella sp. ANA-3 Shewana3_3087 RNA polymerase, sigma 70 subunit, RpoD (RefSeq) no data 78 100
o Shewanella oneidensis MR-1 SO1284 rpoD RNA polymerase sigma-70 factor (NCBI ptt file) no data 78 100
o Alteromonas macleodii MIT1002 MIT1002_00733 Sigma-70 no data 79 100
o Shewanella amazonensis SB2B Sama_0823 RNA polymerase sigma-70 factor (RefSeq) no data 78 100
o Shewanella loihica PV-4 Shew_0996 RpoD family RNA polymerase sigma factor (RefSeq) no data 79 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_02745 RNA polymerase sigma factor RpoD no data 77 100
o Pseudomonas syringae pv. syringae B728a Psyr_4641 RNA polymerase, sigma 70 subunit, RpoD no data 67 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4641 RNA polymerase, sigma 70 subunit, RpoD no data 67 99
o Kangiella aquimarina DSM 16071 B158DRAFT_0818 RNA polymerase sigma factor, sigma-70 family no data 68 100
o Pseudomonas sp. SVBP6 COO64_RS22580 rpoD RNA polymerase sigma factor RpoD no data 68 99
o Pseudomonas fluorescens SBW25 PFLU_RS27535 RNA polymerase sigma factor RpoD no data 67 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS27535 RNA polymerase sigma factor RpoD no data 67 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05296 RNA polymerase sigma factor RpoD no data 67 99
o Pseudomonas simiae WCS417 PS417_25880 RNA polymerase subunit sigma-70 no data 66 99
o Pseudomonas sp. BP01 JOY50_RS18070 rpoD RNA polymerase sigma factor RpoD no data 68 99
o Pseudomonas putida KT2440 PP_0387 RNA polymerase, sigma 70 (sigma D) factor no data 67 99
o Pseudomonas protegens RBAN4 FABNJH_28515 rpoD RNA polymerase sigma factor RpoD no data 67 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2513 RNA polymerase sigma factor RpoD no data 67 99
o Pseudomonas sp. RS175 PFR28_04078 RNA polymerase sigma factor RpoD no data 67 99
o Pseudomonas fluorescens FW300-N2E3 AO353_07385 RNA polymerase subunit sigma-70 no data 67 99
o Pseudomonas fluorescens FW300-N2C3 AO356_14265 RNA polymerase subunit sigma-70 no data 67 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4791 RNA polymerase sigma factor RpoD no data 67 99
o Pseudomonas orientalis W4I3 QF045_RS00280 RNA polymerase sigma factor RpoD no data 67 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1186 RNA polymerase sigma factor RpoD no data 67 99
o Marinobacter adhaerens HP15 HP15_315 RNA polymerase, sigma 70 subunit, RpoD no data 66 100
o Pseudomonas stutzeri RCH2 Psest_3682 RNA polymerase sigma factor, sigma-70 family no data 66 99
o Pseudomonas sp. DMC3 GFF51 RNA polymerase sigma factor RpoD no data 67 99
o Pseudomonas sp. S08-1 OH686_14970 RNA polymerase sigma factor RpoD no data 68 99
o Pseudomonas aeruginosa MRSN321 PFGADD_00586 rpoD RNA polymerase sigma factor RpoD no data 66 99
o Pseudomonas aeruginosa PA14 IKLFDK_22530 RNA polymerase sigma factor RpoD no data 66 99
o Pseudomonas aeruginosa PUPa3 NPBIFN_00590 rpoD RNA polymerase sigma factor RpoD no data 66 99
o Pseudomonas segetis P6 ACVTMO_RS04280 rpoD RNA polymerase sigma factor RpoD no data 66 99
o Acinetobacter baumannii LAC-4 RR41_RS03995 RNA polymerase sigma factor RpoD no data 62 100
o Acinetobacter radioresistens SK82 MPMX26_00713 RNA polymerase sigma factor RpoD no data 59 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13945 RNA polymerase sigma factor RpoD no data 61 99
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS01085 RNA polymerase sigma factor RpoD no data 61 99
o Rhodanobacter sp. FW510-T8 OKGIIK_13865 rpoD RNA polymerase sigma factor RpoD no data 61 99
o Rhodanobacter denitrificans MT42 LRK55_RS07055 RNA polymerase sigma factor RpoD no data 61 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS07325 RNA polymerase sigma factor RpoD no data 61 99
o Lysobacter sp. OAE881 ABIE51_RS02310 RNA polymerase sigma factor RpoD no data 60 100
o Methylophilus sp. DMC18 GFF2349 RNA polymerase sigma factor RpoD no data 60 99
o Dechlorosoma suillum PS Dsui_1209 RNA polymerase sigma factor, sigma-70 family no data 58 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4729.1 RNA polymerase sigma factor RpoD no data 59 99
o Castellaniella sp019104865 MT123 ABCV34_RS02695 RNA polymerase sigma factor RpoD no data 55 99
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03675 RNA polymerase sigma factor RpoD no data 57 99
  Ralstonia solanacearum UW163 UW163_RS09995 RNA polymerase sigma factor RpoD no data 57 99
o Cupriavidus basilensis FW507-4G11 RR42_RS14965 hypothetical protein strong 56 99
  Ralstonia solanacearum GMI1000 RS_RS11120 RNA polymerase sigma factor RpoD no data 57 99
  Ralstonia sp. UNC404CL21Col ABZR87_RS15600 RNA polymerase sigma factor RpoD no data 56 99
  Herbaspirillum seropedicae SmR1 HSERO_RS04365 RNA polymerase sigma factor RpoD no data 56 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS15185 RNA polymerase sigma factor RpoD strong 56 99
o Burkholderia phytofirmans PsJN BPHYT_RS33535 RNA polymerase sigma factor RpoD strong 56 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06008 RNA polymerase, sigma 70 subunit, RpoD strong 56 99
o Paraburkholderia graminis OAS925 ABIE53_004866 RNA polymerase primary sigma factor strong 56 99
  Variovorax sp. SCN45 GFF2879 RNA polymerase sigma factor RpoD no data 54 99
  Variovorax sp. OAS795 ABID97_RS10535 RNA polymerase sigma factor RpoD no data 54 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3822 RNA polymerase sigma factor RpoD no data 54 99
  Acidovorax sp. GW101-3H11 Ac3H11_194 RNA polymerase sigma factor RpoD no data 53 100
  Cupriavidus basilensis FW507-4G11 RR42_RS10750 DNA-directed RNA polymerase sigma-70 factor no data 49 99
  Paraburkholderia graminis OAS925 ABIE53_004960 RNA polymerase primary sigma factor strong 50 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03902 RNA polymerase, sigma 70 subunit, RpoD strong 51 99
  Burkholderia phytofirmans PsJN BPHYT_RS32590 RNA polymerase sigma factor RpoD no data 50 99
  Sphingobium sp. HT1-2 GFF2093 RNA polymerase sigma factor RpoD no data 47 99
o Azospirillum brasilense Sp245 AZOBR_RS10905 RNA polymerase sigma factor RpoD no data 51 99
o Azospirillum sp. SherDot2 MPMX19_00761 RNA polymerase sigma factor RpoD no data 49 99
  Dinoroseobacter shibae DFL-12 Dshi_2261 RNA polymerase, sigma 70 subunit, RpoD family (RefSeq) no data 48 99
o Sphingomonas koreensis DSMZ 15582 Ga0059261_4238 RNA polymerase sigma factor RpoD, C-terminal domain no data 47 99
  Rhodopseudomonas palustris CGA009 TX73_006610 RNA polymerase sigma factor RpoD no data 47 99
o Agrobacterium fabrum C58 Atu2167 RNA polymerase sigma factor RpoD no data 48 99
o Xanthobacter sp. DMC5 GFF3244 RNA polymerase sigma factor RpoD no data 49 99
o Phaeobacter inhibens DSM 17395 PGA1_c08800 RNA polymerase sigma factor RpoD no data 48 99
  Rhizobium sp. OAE497 ABIE40_RS12720 RNA polymerase sigma factor RpoD no data 48 99
o Sinorhizobium meliloti 1021 SMc01563 RNA polymerase sigma factor RpoD no data 48 99
o Caulobacter crescentus NA1000 CCNA_03142 RNA polymerase sigma factor rpoD no data 49 99
o Caulobacter crescentus NA1000 Δfur CCNA_03142 RNA polymerase sigma factor rpoD no data 49 99
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10595 RNA polymerase sigma factor RpoD no data 48 99
  Ralstonia solanacearum PSI07 RPSI07_RS13555 RNA polymerase sigma factor RpoD no data 65 61
o Desulfovibrio vulgaris Hildenborough JW710 DVU1788 rpoD RNA polymerase sigma-70 factor (TIGR) no data 44 99
  Magnetospirillum magneticum AMB-1 AMB_RS03585 RNA polymerase sigma factor RpoD no data 63 59
o Desulfovibrio vulgaris Miyazaki F DvMF_0494 RNA polymerase, sigma 70 subunit, RpoD subfamily (RefSeq) no data 43 98
  Bosea sp. OAE506 ABIE41_RS11995 RNA polymerase sigma factor RpoD no data 63 58
  Paraburkholderia sabiae LMG 24235 QEN71_RS13555 RNA polymerase sigma factor RpoD no data 55 64
  Fusobacterium nucleatum SB010 HUW76_03650 RNA polymerase sigma factor RpoD no data 65 38
  Bifidobacterium breve UCC2003 BBR_RS16480 RNA polymerase sigma factor no data 53 46
  Mycobacterium tuberculosis H37Rv Rv2703 RNA polymerase sigma factor SigA (sigma-A) no data 60 39
  Synechococcus elongatus PCC 7942 Synpcc7942_0649 rpoD1 RNA polymerase sigma factor RpoD no data 59 39
  Synechocystis sp000284455 PCC 6803 SGL_RS17245 RNA polymerase sigma factor RpoD no data 59 39
  Mycobacterium tuberculosis H37Rv Rv2710 RNA polymerase sigma factor SigB no data 49 43
  Shewanella amazonensis SB2B Sama_0276 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like protein (RefSeq) insig. 34 84
  Synechococcus elongatus PCC 7942 Synpcc7942_1849 sigC RNA polymerase sigma factor SigC strong 46 47
  Synechococcus elongatus PCC 7942 Synpcc7942_1746 rpoD2 group2 RNA polymerase sigma factor SigB strong 44 40
  Synechocystis sp000284455 PCC 6803 SGL_RS12540 RNA polymerase sigma factor, RpoD/SigA family strong 45 39
  Synechocystis sp000284455 PCC 6803 SGL_RS14610 RNA polymerase sigma factor SigC cofit 46 41
  Synechocystis sp000284455 PCC 6803 SGL_RS07740 RNA polymerase sigma factor, RpoD/SigA family strong 47 39
  Synechocystis sp000284455 PCC 6803 SGL_RS07975 RNA polymerase sigma factor, RpoD/SigA family strong 45 46
  Synechococcus elongatus PCC 7942 Synpcc7942_1557 rpoD6 principal RNA polymerase sigma factor SigA strong 46 37
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS16420 RNA polymerase sigma factor RpoD/SigA no data 42 44
  Phocaeicola dorei CL03T12C01 ABI39_RS13985 RNA polymerase sigma factor RpoD/SigA no data 42 44
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17770 RNA polymerase sigma factor RpoD/SigA no data 42 44
  Cellulophaga baltica 18 M666_RS08520 sigma-70 family RNA polymerase sigma factor no data 44 39
  Synechococcus elongatus PCC 7942 Synpcc7942_0672 rpoD3 RNA polymerase sigma factor SigD sig. 43 42
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3437 RNA polymerase sigma factor, sigma-70 family no data 43 39
  Bacteroides ovatus ATCC 8483 BACOVA_00615 Sigma-70 region 2 no data 41 44
  Bacteroides stercoris CC31F HMPREF1181_RS10780 RNA polymerase sigma factor RpoD/SigA no data 41 44
  Bacteroides thetaiotaomicron VPI-5482 BT1311 RNA polymerase sigma factor rpoD (Sigma-A) (NCBI ptt file) no data 41 44
  Vibrio cholerae E7946 ATCC 55056 CSW01_02835 RNA polymerase sigma factor RpoS cofit 45 37
  Synechococcus elongatus PCC 7942 Synpcc7942_0569 rpoD4 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like strong 46 37
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_04885 RNA polymerase subunit sigma no data 42 39
  Dickeya dadantii 3937 DDA3937_RS16875 RNA polymerase sigma factor RpoS no data 43 40
  Dickeya dianthicola ME23 DZA65_RS18020 RNA polymerase sigma factor RpoS sig. 43 40
  Serratia liquefaciens MT49 IAI46_03790 RNA polymerase sigma factor RpoS strong 42 40
  Erwinia amylovora T8 OLJFJH_09380 RNA polymerase sigma factor RpoS sig. 42 40
  Klebsiella pneumoniae MKP103 KDGMDA_03220 RNA polymerase sigma factor RpoS strong 42 40
  Klebsiella pneumoniae MRSN742743 GJGHJB_01009 rpoS RNA polymerase sigma factor RpoS strong 42 40
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4788 RNA polymerase sigma factor RpoS strong 42 40
  Dickeya dianthicola 67-19 HGI48_RS16945 RNA polymerase sigma factor RpoS insig. 43 39
  Escherichia coli BL21 ECD_02591 RNA polymerase, sigma S (sigma 38) factor cofit 42 40
  Escherichia fergusonii Becca EFB2_01169 RNA polymerase sigma factor RpoS cofit 42 40
  Escherichia coli ECOR27 NOLOHH_12310 rpoS RNA polymerase sigma factor RpoS strong 42 40
  Escherichia coli ECOR38 HEPCGN_19675 rpoS RNA polymerase sigma factor RpoS strong 42 40
  Escherichia coli ECRC101 MCAODC_11020 rpoS RNA polymerase sigma factor RpoS strong 42 40
  Escherichia coli ECRC102 NIAGMN_18265 rpoS RNA polymerase sigma factor RpoS strong 42 40
  Escherichia coli ECRC62 BNILDI_10860 rpoS RNA polymerase sigma factor RpoS strong 42 40
  Escherichia coli ECRC98 JDDGAC_24160 rpoS RNA polymerase sigma factor RpoS strong 42 40
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00992 RNA polymerase sigma factor RpoS insig. 42 40
  Enterobacter sp. TBS_079 MPMX20_03627 RNA polymerase sigma factor RpoS strong 42 40
  Pantoea sp. MT58 IAI47_04235 RNA polymerase sigma factor RpoS strong 42 40
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS04505 rpoS RNA polymerase sigma factor RpoS strong 42 40
  Escherichia coli BW25113 b2741 rpoS RNA polymerase sigma factor (NCBI) strong 42 40
  Enterobacter asburiae PDN3 EX28DRAFT_2837 RNA polymerase, sigma 38 subunit, RpoS strong 42 40
  Shewanella loihica PV-4 Shew_1213 RpoD family RNA polymerase sigma factor (RefSeq) insig. 43 37
  Escherichia coli ECRC100 OKFHMN_20495 rpoS RNA polymerase sigma factor RpoS cofit 42 40
  Pectobacterium carotovorum WPP14 HER17_RS04350 RNA polymerase sigma factor RpoS strong 42 40
  Rahnella sp. WP5 EX31_RS07825 RNA polymerase sigma factor RpoS strong 41 44
  Klebsiella michiganensis M5al BWI76_RS22645 RNA polymerase sigma factor RpoS strong 41 42
  Pseudomonas sp. S08-1 OH686_18185 RNA polymerase sigma factor RpoS cofit 43 37
  Cellulophaga baltica 18 M666_RS16995 RNA polymerase sigma factor RpoD/SigA strong 42 39
  Shewanella amazonensis SB2B Sama_1044 RNA polymerase sigma-38 factor (RefSeq) sig. 40 44
  Escherichia coli ECRC99 KEDOAH_07640 rpoS RNA polymerase sigma factor RpoS no data 43 36
  Pseudomonas stutzeri RCH2 Psest_2806 RNA polymerase sigma factor RpoS strong 40 43
  Alteromonas macleodii MIT1002 MIT1002_00625 RNA polymerase sigma factor RpoS strong 44 37
  Marinobacter adhaerens HP15 HP15_1283 RNA polymerase, sigma 70 subunit, RpoD family strong 43 37
  Shewanella oneidensis MR-1 SO3432 rpoS RNA polymerase sigma-38 factor (NCBI ptt file) sig. 42 37
  Pseudomonas segetis P6 ACVTMO_RS16960 rpoS RNA polymerase sigma factor RpoS strong 42 37
  Pseudomonas aeruginosa MRSN321 PFGADD_01346 rpoS RNA polymerase sigma factor RpoS strong 40 43
  Pseudomonas aeruginosa PA14 IKLFDK_18495 RNA polymerase sigma factor RpoS strong 40 43
  Pseudomonas aeruginosa PUPa3 NPBIFN_01365 rpoS RNA polymerase sigma factor RpoS strong 40 43
  Shewanella sp. ANA-3 Shewana3_1124 RNA polymerase, sigma 38 subunit, RpoS (RefSeq) sig. 42 37
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04285 RNA polymerase sigma factor RpoD no data 42 39
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15895 RNA polymerase sigma factor RpoD/SigA no data 42 39
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_17500 rpoS RNA polymerase sigma factor RpoS strong 42 40
  Erwinia tracheiphila SCR3 LU632_RS06480 rpoS RNA polymerase sigma factor RpoS strong 42 40
  Pseudomonas protegens RBAN4 FABNJH_06235 rpoS RNA polymerase sigma factor RpoS insig. 42 37
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4674 RNA polymerase sigma factor RpoS strong 42 37
  Herbaspirillum seropedicae SmR1 HSERO_RS14830 RNA polymerase sigma factor RpoS insig. 42 37
  Pseudomonas syringae pv. syringae B728a Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS sig. 42 37
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS cofit 42 37
  Pseudomonas fluorescens FW300-N2E3 AO353_16615 RNA polymerase sigma factor RpoS strong 42 37
  Pseudomonas sp. DMC3 GFF2084 RNA polymerase sigma factor RpoS strong 42 37
  Pseudomonas sp. RS175 PFR28_00427 RNA polymerase sigma factor RpoS strong 42 37
  Pseudomonas sp. SVBP6 COO64_RS19795 rpoS RNA polymerase sigma factor RpoS insig. 42 37
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3115 RNA polymerase sigma factor RpoS strong 42 37
  Pseudomonas fluorescens FW300-N2C3 AO356_05885 RNA polymerase sigma factor RpoS strong 42 37
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3037 RNA polymerase sigma factor RpoS strong 42 37
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01443 RNA polymerase sigma factor RpoS cofit 40 43
  Pseudomonas simiae WCS417 PS417_06365 RNA polymerase sigma factor strong 40 43
  Pseudomonas orientalis W4I3 QF045_RS09210 RNA polymerase sigma factor RpoS insig. 40 43
  Pseudomonas sp. BP01 JOY50_RS23755 rpoS RNA polymerase sigma factor RpoS insig. 42 37
  Pseudomonas putida KT2440 PP_1623 RNA polymerase, sigma S (sigma 38) factor strong 42 37
  Pseudomonas fluorescens SBW25 PFLU_RS06430 RNA polymerase sigma factor RpoS cofit 40 43
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06430 RNA polymerase sigma factor RpoS strong 40 43
  Cellulophaga baltica 18 M666_RS16155 RNA polymerase sigma factor RpoD/SigA insig. 37 45
  Cupriavidus basilensis FW507-4G11 RR42_RS13185 RNA polymerase sigma factor RpoS strong 42 38
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15235 RNA polymerase sigma factor RpoS strong 40 43
  Ralstonia solanacearum UW163 UW163_RS12700 RNA polymerase sigma factor RpoS sig. 40 43
  Ralstonia solanacearum PSI07 RPSI07_RS18140 RNA polymerase sigma factor RpoS strong 40 40
  Ralstonia sp. UNC404CL21Col ABZR87_RS10875 RNA polymerase sigma factor RpoS strong 40 40
  Ralstonia solanacearum GMI1000 RS_RS06045 RNA polymerase sigma factor RpoS strong 40 40
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16485 RNA polymerase sigma factor RpoD/SigA insig. 40 37
  Dechlorosoma suillum PS Dsui_1971 RNA polymerase sigma factor RpoS cofit 38 45
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00844 RNA polymerase, sigma 38 subunit, RpoS no data 38 42
  Burkholderia phytofirmans PsJN BPHYT_RS09115 RNA polymerase sigma factor RpoS sig. 38 42
  Paraburkholderia graminis OAS925 ABIE53_002057 RNA polymerase nonessential primary-like sigma factor strong 38 42
  Paraburkholderia sabiae LMG 24235 QEN71_RS22240 RNA polymerase sigma factor RpoS cofit 38 42
  Ralstonia solanacearum PSI07 RPSI07_RS07910 RNA polymerase sigma factor insig. 40 38
  Rhodanobacter denitrificans MT42 LRK55_RS09025 sigma-70 family RNA polymerase sigma factor insig. 45 31
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2597 RNA polymerase sigma factor, sigma-70 family insig. 37 39
  Marinobacter adhaerens HP15 HP15_3857 RNA polymerase, sigma 70 subunit, RpoD family insig. 33 41
  Variovorax sp. OAS795 ABID97_RS10730 sigma-70 family RNA polymerase sigma factor cofit 38 37
  Variovorax sp. SCN45 GFF2842 RNA polymerase sigma factor RpoS insig. 39 39
  Rhodospirillum rubrum S1H Rru_A2882 Sigma 70 (RpoD) (NCBI) no data 45 26
  Desulfovibrio vulgaris Hildenborough JW710 DVU1584 rpoH sigma 70 family protein (TIGR) no data 34 36
  Desulfovibrio vulgaris Miyazaki F DvMF_0477 putative RNA polymerase, sigma 70 family subunit (RefSeq) no data 35 36
  Azospirillum sp. SherDot2 MPMX19_05595 RNA polymerase sigma factor RpoH insig. 33 37
  Azospirillum sp. SherDot2 MPMX19_01046 RNA polymerase sigma factor RpoH insig. 32 41
  Rhodospirillum rubrum S1H Rru_A1021 Sigma 32 (RpoH) (NCBI) strong 32 38
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS03735 RNA polymerase sigma factor RpoH no data 31 37
  Magnetospirillum magneticum AMB-1 AMB_RS14115 RNA polymerase sigma factor RpoH no data 35 37
  Azospirillum brasilense Sp245 AZOBR_RS21830 RNA polymerase sigma 70 insig. 33 37
  Azospirillum brasilense Sp245 AZOBR_RS08905 RNA polymerase sigma 70 sig. 32 37
  Azospirillum sp. SherDot2 MPMX19_05441 RNA polymerase sigma factor RpoH no data 31 37
  Castellaniella sp019104865 MT123 ABCV34_RS13215 RNA polymerase sigma factor RpoH no data 31 40
  Azospirillum brasilense Sp245 AZOBR_RS00930 RNA polymerase sigma 70 insig. 31 37
  Dechlorosoma suillum PS Dsui_1121 alternative sigma factor RpoH no data 34 37
  Azospirillum brasilense Sp245 AZOBR_RS10665 RNA polymerase sigma 70 strong 31 38
  Sinorhizobium meliloti 1021 SMc03873 RNA polymerase factor sigma-32 insig. 32 37
  Sinorhizobium meliloti 1021 SMc00646 RNA polymerase factor sigma-32 no data 32 38
  Rhodospirillum rubrum S1H Rru_A1110 Sigma 32 (RpoH) (NCBI) sig. 31 37
  Azospirillum sp. SherDot2 MPMX19_03673 RNA polymerase sigma factor RpoH insig. 30 42
  Azospirillum brasilense Sp245 AZOBR_RS21510 RNA polymerase sigma 70 insig. 29 40
  Caulobacter crescentus NA1000 CCNA_03195 RNA polymerase sigma factor RpoH no data 32 38
  Caulobacter crescentus NA1000 Δfur CCNA_03195 RNA polymerase sigma factor RpoH no data 32 38
  Sphingobium sp. HT1-2 GFF4061 RNA polymerase sigma factor RpoH no data 33 37
  Azospirillum sp. SherDot2 MPMX19_02324 RNA polymerase sigma factor RpoH insig. 31 38
  Xanthobacter sp. DMC5 GFF2509 RNA polymerase sigma factor RpoH no data 31 37
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10065 RNA polymerase sigma factor RpoH no data 31 38
  Herbaspirillum seropedicae SmR1 HSERO_RS20735 RNA polymerase sigma 70 no data 34 37
  Methylophilus sp. DMC18 GFF1926 RNA polymerase sigma factor RpoH no data 32 37
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0665 alternative sigma factor RpoH no data 32 37
  Paraburkholderia graminis OAS925 ABIE53_000694 RNA polymerase sigma-32 factor no data 32 37
  Rhodopseudomonas palustris CGA009 TX73_001900 RNA polymerase sigma factor RpoH no data 31 38