Conservation of cofitness between Psyr_0034 and Psyr_4369 in Pseudomonas syringae pv. syringae B728a

116 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0034 tryptophan synthase, beta chain 1.0 Psyr_4369 glutamate-5-semialdehyde dehydrogenase 0.55 20
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0034 tryptophan synthase, beta chain 1.00 Psyr_4369 glutamate-5-semialdehyde dehydrogenase low > 86
Pseudomonas sp. SVBP6 0.91 COO64_RS02275 trpB tryptophan synthase subunit beta 0.87 COO64_RS15630 glutamate-5-semialdehyde dehydrogenase low > 93
Pseudomonas sp. BP01 0.90 JOY50_RS21310 trpB tryptophan synthase subunit beta 0.83 JOY50_RS17680 glutamate-5-semialdehyde dehydrogenase low > 84
Pseudomonas putida KT2440 0.90 PP_0083 tryptophan synthase beta chain 0.85 PP_4811 Gamma-glutamyl phosphate reductase low > 96
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_1831 Tryptophan synthase beta chain (EC 4.2.1.20) 0.86 Pf1N1B4_2688 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) low > 87
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_10710 tryptophan synthase subunit beta 0.88 AO353_06495 gamma-glutamyl phosphate reductase 0.66 51
Pseudomonas fluorescens SBW25 0.85 PFLU_RS00180 tryptophan synthase subunit beta 0.75 PFLU_RS26675 glutamate-5-semialdehyde dehydrogenase
Pseudomonas simiae WCS417 0.85 PS417_00185 tryptophan synthase subunit beta 0.75 PS417_24745 gamma-glutamyl phosphate reductase 0.60 41
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_566 Tryptophan synthase beta chain (EC 4.2.1.20) 0.85 PfGW456L13_1356 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) low > 87
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS00180 tryptophan synthase subunit beta 0.75 PFLU_RS26675 glutamate-5-semialdehyde dehydrogenase
Pseudomonas segetis P6 0.85 MPMX49_00373 Tryptophan synthase beta chain 0.86 MPMX49_01048 Gamma-glutamyl phosphate reductase
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_4048 Tryptophan synthase beta chain (EC 4.2.1.20) 0.85 Pf6N2E2_4993 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) low > 103
Pseudomonas lactucae CFBP13502 0.85 GEMAOFIL_00242 Tryptophan synthase beta chain 0.75 GEMAOFIL_05102 Gamma-glutamyl phosphate reductase
Pseudomonas sp. RS175 0.85 PFR28_04715 Tryptophan synthase beta chain 0.87 PFR28_03872 Gamma-glutamyl phosphate reductase
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_10915 tryptophan synthase subunit beta 0.88 AO356_15290 gamma-glutamyl phosphate reductase low > 104
Pseudomonas sp. DMC3 0.85 GFF676 Tryptophan synthase beta chain 0.85 GFF3876 Gamma-glutamyl phosphate reductase low > 89
Pseudomonas sp. S08-1 0.84 OH686_12425 tryptophan synthase, beta subunit 0.72 OH686_09340 Gamma-glutamyl phosphate reductase 0.80 9
Pseudomonas aeruginosa PA14 0.83 IKLFDK_25375 tryptophan synthase subunit beta 0.71 IKLFDK_20665 glutamate-5-semialdehyde dehydrogenase low > 100
Pseudomonas stutzeri RCH2 0.81 Psest_0063 tryptophan synthase, beta subunit 0.73 Psest_0508 gamma-glutamyl phosphate reductase 0.58 28
Azospirillum sp. SherDot2 0.72 MPMX19_02736 Tryptophan synthase beta chain 0.48 MPMX19_01943 Gamma-glutamyl phosphate reductase
Azospirillum brasilense Sp245 0.72 AZOBR_RS00525 tryptophan synthase subunit beta 0.46 AZOBR_RS04075 gamma-glutamyl phosphate reductase
Bosea sp. OAE506 0.72 ABIE41_RS04270 tryptophan synthase subunit beta 0.40 ABIE41_RS07580 glutamate-5-semialdehyde dehydrogenase
Rhizobium sp. OAE497 0.72 ABIE40_RS19335 tryptophan synthase subunit beta 0.46 ABIE40_RS18925 glutamate-5-semialdehyde dehydrogenase
Agrobacterium fabrum C58 0.72 Atu0018 tryptophan synthase beta subunit 0.48 Atu2779 gamma-glutamyl phosphate reductase
Sphingomonas koreensis DSMZ 15582 0.71 Ga0059261_0238 tryptophan synthase, beta subunit 0.46 Ga0059261_2506 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41)
Sinorhizobium meliloti 1021 0.70 SMc02766 tryptophan synthase subunit beta 0.48 SMc03777 gamma-glutamyl phosphate reductase 0.66 76
Xanthobacter sp. DMC5 0.70 GFF3882 Tryptophan synthase beta chain 0.45 GFF3946 Gamma-glutamyl phosphate reductase
Magnetospirillum magneticum AMB-1 0.70 AMB_RS20295 tryptophan synthase subunit beta 0.50 AMB_RS20640 glutamate-5-semialdehyde dehydrogenase
Rhodopseudomonas palustris CGA009 0.70 TX73_000360 tryptophan synthase subunit beta 0.45 TX73_000855 glutamate-5-semialdehyde dehydrogenase
Rhodospirillum rubrum S1H 0.70 Rru_A3427 Tryptophan synthase, beta chain (NCBI) 0.49 Rru_A1238 Gamma-glutamyl phosphate reductase GPR (NCBI)
Caulobacter crescentus NA1000 0.69 CCNA_03658 tryptophan synthase beta chain 0.45 CCNA_03543 gamma-glutamyl phosphate reductase 0.79 62
Caulobacter crescentus NA1000 Δfur 0.69 CCNA_03658 tryptophan synthase beta chain 0.45 CCNA_03543 gamma-glutamyl phosphate reductase low > 67
Dinoroseobacter shibae DFL-12 0.69 Dshi_1031 tryptophan synthase, beta subunit (RefSeq) 0.46 Dshi_1469 gamma-glutamyl phosphate reductase (RefSeq)
Phaeobacter inhibens DSM 17395 0.68 PGA1_c04870 tryptophan synthase beta chain 0.44 PGA1_c15520 gamma-glutamyl phosphate reductase ProA
Sphingobium sp. HT1-2 0.68 GFF1626 Tryptophan synthase beta chain (EC 4.2.1.20) 0.44 GFF952 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) low > 95
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS14500 tryptophan synthase subunit beta 0.61 ABZR87_RS01395 glutamate-5-semialdehyde dehydrogenase low > 80
Ralstonia solanacearum GMI1000 0.65 RS_RS09965 tryptophan synthase subunit beta 0.59 RS_RS13715 gamma-glutamyl-phosphate reductase
Ralstonia solanacearum PSI07 0.65 RPSI07_RS14730 tryptophan synthase subunit beta 0.60 RPSI07_RS11475 glutamate-5-semialdehyde dehydrogenase 0.63 27
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS02585 tryptophan synthase subunit beta 0.60 RALBFv3_RS05825 glutamate-5-semialdehyde dehydrogenase
Ralstonia solanacearum UW163 0.65 UW163_RS11140 tryptophan synthase subunit beta 0.60 UW163_RS07800 glutamate-5-semialdehyde dehydrogenase
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS08000 tryptophan synthase subunit beta 0.44 ABZR86_RS08680 glutamate-5-semialdehyde dehydrogenase low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.64 A4249_RS11330 tryptophan synthase subunit beta 0.41 A4249_RS16120 glutamate-5-semialdehyde dehydrogenase
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_06067 tryptophan synthase, beta chain 0.57 H281DRAFT_06324 glutamate-5-semialdehyde dehydrogenase low > 103
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS17645 tryptophan synthase subunit beta 0.60 QEN71_RS26940 glutamate-5-semialdehyde dehydrogenase low > 153
Methylophilus sp. DMC18 0.64 GFF656 Tryptophan synthase beta chain 0.61 GFF254 Gamma-glutamyl phosphate reductase
Paraburkholderia graminis OAS925 0.64 ABIE53_004809 tryptophan synthase beta chain 0.55 ABIE53_003523 glutamate-5-semialdehyde dehydrogenase
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS01685 tryptophan synthase subunit beta 0.44 LRK54_RS02370 glutamate-5-semialdehyde dehydrogenase low > 59
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS33875 tryptophan synthase subunit alpha 0.57 BPHYT_RS16770 gamma-glutamyl phosphate reductase
Rhodanobacter denitrificans MT42 0.64 LRK55_RS01465 tryptophan synthase subunit beta 0.44 LRK55_RS02125 glutamate-5-semialdehyde dehydrogenase low > 63
Dechlorosoma suillum PS 0.64 Dsui_3192 tryptophan synthase, beta subunit 0.60 Dsui_1220 gamma-glutamyl phosphate reductase
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS14360 tryptophan synthase subunit alpha 0.56 RR42_RS17530 gamma-glutamyl phosphate reductase low > 128
Acinetobacter baumannii LAC-4 0.63 RR41_RS03115 tryptophan synthase subunit beta 0.67 RR41_RS16505 glutamate-5-semialdehyde dehydrogenase low > 55
Rhodanobacter sp000427505 FW510-R12 0.63 LRK53_RS08350 tryptophan synthase subunit beta 0.42 LRK53_RS07575 glutamate-5-semialdehyde dehydrogenase low > 59
Rhodanobacter sp. FW510-T8 0.63 OKGIIK_04845 trpB tryptophan synthase subunit beta 0.41 OKGIIK_09415 proA glutamate-5-semialdehyde dehydrogenase low > 53
Castellaniella sp019104865 MT123 0.63 ABCV34_RS08435 tryptophan synthase subunit beta 0.58 ABCV34_RS00845 glutamate-5-semialdehyde dehydrogenase
Lysobacter sp. OAE881 0.63 ABIE51_RS08260 tryptophan synthase subunit beta 0.44 ABIE51_RS13365 glutamate-5-semialdehyde dehydrogenase low > 62
Acinetobacter radioresistens SK82 0.62 MPMX26_02617 Tryptophan synthase beta chain 0.67 MPMX26_00417 Gamma-glutamyl phosphate reductase low > 36
Marinobacter adhaerens HP15 0.62 HP15_1827 tryptophan synthase, beta subunit 0.70 HP15_601 gamma-glutamyl phosphate reductase
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.1964.1 Tryptophan synthase beta chain (EC 4.2.1.20) 0.41 Xcc-8004.2327.1 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.70 61
Acidovorax sp. GW101-3H11 0.61 Ac3H11_1534 Tryptophan synthase beta chain (EC 4.2.1.20) 0.57 Ac3H11_704 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) low > 79
Variovorax sp. OAS795 0.61 ABID97_RS08430 tryptophan synthase subunit beta 0.54 ABID97_RS04600 glutamate-5-semialdehyde dehydrogenase
Variovorax sp. SCN45 0.61 GFF3883 Tryptophan synthase beta chain (EC 4.2.1.20) 0.56 GFF6326 Gamma-glutamyl phosphate reductase (EC 1.2.1.41)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF3355 Tryptophan synthase beta chain (EC 4.2.1.20) 0.55 GFF2641 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) low > 90
Synechocystis sp000284455 PCC 6803 0.60 SGL_RS16740 tryptophan synthase subunit beta 0.40 SGL_RS14505 glutamate-5-semialdehyde dehydrogenase
Herbaspirillum seropedicae SmR1 0.60 HSERO_RS16475 tryptophan synthase subunit alpha 0.59 HSERO_RS02965 gamma-glutamyl phosphate reductase low > 78
Synechococcus elongatus PCC 7942 0.59 Synpcc7942_2143 trpB tryptophan synthase subunit beta 0.36 Synpcc7942_2265 proA glutamate-5-semialdehyde dehydrogenase
Mycobacterium tuberculosis H37Rv 0.56 Rv1612 Tryptophan synthase, beta subunit TrpB 0.40 Rv2427c Probable gamma-glutamyl phosphate reductase protein ProA (GPR) (glutamate-5-semialdehyde dehydrogenase) (glutamyl-gamma-semialdehyde dehydrogenase)
Desulfovibrio vulgaris Hildenborough JW710 0.55 DVU0085 trpB-1 tryptophan synthase, beta subunit (TIGR) 0.43 DVU1953 proA gamma-glutamyl phosphate reductase (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.54 DvMF_2237 tryptophan synthase subunit beta (RefSeq) 0.40 DvMF_0612 proA gamma-glutamyl phosphate reductase (RefSeq) low > 51
Pontibacter actiniarum KMM 6156, DSM 19842 0.54 CA264_05080 tryptophan synthase subunit beta 0.35 CA264_07720 gamma-glutamyl-phosphate reductase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.54 ABZR88_RS10665 tryptophan synthase subunit beta 0.33 ABZR88_RS22165 glutamate-5-semialdehyde dehydrogenase
Pedobacter sp. GW460-11-11-14-LB5 0.53 CA265_RS05020 tryptophan synthase subunit beta 0.34 CA265_RS20850 glutamate-5-semialdehyde dehydrogenase
Erwinia amylovora T8 0.53 OLJFJH_13475 tryptophan synthase subunit beta 0.42 OLJFJH_18405 glutamate-5-semialdehyde dehydrogenase low > 58
Alteromonas macleodii MIT1002 0.52 MIT1002_01426 Tryptophan synthase beta chain 0.44 MIT1002_01885 Gamma-glutamyl phosphate reductase
Enterobacter asburiae PDN3 0.52 EX28DRAFT_0933 tryptophan synthase, beta subunit 0.43 EX28DRAFT_2650 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) low > 76
Pantoea agglomerans CFBP13505 P0401 0.52 PagCFBP13505_RS07015 tryptophan synthase subunit beta 0.41 PagCFBP13505_RS10045 glutamate-5-semialdehyde dehydrogenase
Escherichia fergusonii Becca 0.52 EFB2_02665 Tryptophan synthase beta chain 0.43 EFB2_03777 Gamma-glutamyl phosphate reductase low > 86
Escherichia coli BL21 0.52 ECD_01235 tryptophan synthase, beta subunit 0.43 ECD_00240 gamma-glutamylphosphate reductase 0.71 37
Enterobacter sp. TBS_079 0.52 MPMX20_02513 Tryptophan synthase beta chain 0.43 MPMX20_00928 Gamma-glutamyl phosphate reductase 0.89 29
Pectobacterium carotovorum WPP14 0.52 HER17_RS10935 tryptophan synthase subunit beta 0.40 HER17_RS04705 glutamate-5-semialdehyde dehydrogenase 0.94 36
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF2725 Tryptophan synthase beta chain (EC 4.2.1.20) 0.43 GFF4115 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) low > 78
Escherichia coli ECRC62 0.52 BNILDI_18475 trpB tryptophan synthase subunit beta 0.43 BNILDI_00240 proA glutamate-5-semialdehyde dehydrogenase 0.94 16
Escherichia coli ECRC101 0.52 MCAODC_15595 trpB tryptophan synthase subunit beta 0.43 MCAODC_00190 proA glutamate-5-semialdehyde dehydrogenase 0.48 80
Shewanella amazonensis SB2B 0.52 Sama_2133 tryptophan synthase subunit beta (RefSeq) 0.37 Sama_2515 proA gamma-glutamyl phosphate reductase (RefSeq) 0.89 44
Escherichia coli Nissle 1917 0.52 ECOLIN_RS07600 tryptophan synthase subunit beta 0.44 ECOLIN_RS01830 glutamate-5-semialdehyde dehydrogenase 0.80 27
Escherichia coli ECRC100 0.52 OKFHMN_02670 trpB tryptophan synthase subunit beta 0.43 OKFHMN_09670 proA glutamate-5-semialdehyde dehydrogenase low > 79
Escherichia coli ECRC102 0.52 NIAGMN_26840 trpB tryptophan synthase subunit beta 0.43 NIAGMN_07530 proA glutamate-5-semialdehyde dehydrogenase
Escherichia coli ECOR38 0.52 HEPCGN_25520 trpB tryptophan synthase subunit beta 0.43 HEPCGN_07775 proA glutamate-5-semialdehyde dehydrogenase 0.87 52
Escherichia coli ECOR27 0.52 NOLOHH_20330 trpB tryptophan synthase subunit beta 0.43 NOLOHH_02045 proA glutamate-5-semialdehyde dehydrogenase 0.95 5
Rahnella sp. WP5 0.52 EX31_RS09975 tryptophan synthase subunit beta 0.43 EX31_RS20975 glutamate-5-semialdehyde dehydrogenase 0.96 28
Escherichia coli BW25113 0.52 b1261 trpB tryptophan synthase subunit beta (NCBI) 0.43 b0243 proA gamma-glutamyl phosphate reductase (NCBI) 0.88 36
Serratia liquefaciens MT49 0.52 IAI46_14040 tryptophan synthase subunit beta 0.42 IAI46_04435 glutamate-5-semialdehyde dehydrogenase 0.55 48
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_02422 Tryptophan synthase beta chain 0.43 OHPLBJKB_03397 Gamma-glutamyl phosphate reductase low > 74
Escherichia coli ECRC99 0.52 KEDOAH_26080 trpB tryptophan synthase subunit beta 0.43 KEDOAH_18485 proA glutamate-5-semialdehyde dehydrogenase
Pantoea sp. MT58 0.52 IAI47_09170 tryptophan synthase subunit beta 0.41 IAI47_15115 glutamate-5-semialdehyde dehydrogenase 0.89 36
Escherichia coli ECRC98 0.52 JDDGAC_05215 trpB tryptophan synthase subunit beta 0.43 JDDGAC_13295 proA glutamate-5-semialdehyde dehydrogenase 0.65 53
Echinicola vietnamensis KMM 6221, DSM 17526 0.51 Echvi_2510 tryptophan synthase, beta subunit 0.30 Echvi_2633 gamma-glutamylphosphate reductase (EC 1.2.1.41) (from data)
Parabacteroides merdae CL09T00C40 0.51 HMPREF1078_RS00150 tryptophan synthase subunit beta 0.35 HMPREF1078_RS10655 glutamate-5-semialdehyde dehydrogenase 0.97 12
Bacteroides stercoris CC31F 0.51 HMPREF1181_RS15320 tryptophan synthase subunit beta 0.36 HMPREF1181_RS03320 glutamate-5-semialdehyde dehydrogenase 0.86 26
Klebsiella pneumoniae MKP103 0.51 KDGMDA_19550 tryptophan synthase subunit beta 0.44 KDGMDA_14000 glutamate-5-semialdehyde dehydrogenase low > 95
Klebsiella michiganensis M5al 0.51 BWI76_RS11845 tryptophan synthase subunit beta 0.44 BWI76_RS05835 gamma-glutamyl-phosphate reductase 0.82 40
Shewanella loihica PV-4 0.51 Shew_2255 tryptophan synthase subunit beta (RefSeq) 0.43 Shew_3015 gamma-glutamyl phosphate reductase (RefSeq) low > 60
Shewanella sp. ANA-3 0.51 Shewana3_1516 tryptophan synthase subunit beta (RefSeq) 0.43 Shewana3_4057 glutamate-5-semialdehyde dehydrogenase (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.51 LU632_RS12770 trpB tryptophan synthase subunit beta 0.40 LU632_RS01190 proA glutamate-5-semialdehyde dehydrogenase low > 74
Shewanella oneidensis MR-1 0.51 SO3023 trpB tryptophan synthase, beta subunit (NCBI ptt file) 0.39 SO1122 proA gamma-glutamyl phosphate reductase (NCBI ptt file) 0.94 8
Cellulophaga baltica 18 0.51 M666_RS09065 tryptophan synthase subunit beta 0.30 M666_RS02645 glutamate-5-semialdehyde dehydrogenase low > 67
Erwinia tracheiphila HP pepo 2.2 0.51 IJEDHG_23490 trpB tryptophan synthase subunit beta 0.41 IJEDHG_15495 proA glutamate-5-semialdehyde dehydrogenase low > 61
Bacteroides thetaiotaomicron VPI-5482 0.51 BT0533 tryptophan synthase beta chain (NCBI ptt file) 0.34 BT3718 gamma-glutamyl phosphate reductase (NCBI ptt file) 0.87 13
Dickeya dianthicola 67-19 0.50 HGI48_RS10465 tryptophan synthase subunit beta 0.40 HGI48_RS16600 glutamate-5-semialdehyde dehydrogenase low > 71
Dickeya dadantii 3937 0.50 DDA3937_RS10465 tryptophan synthase subunit beta 0.43 DDA3937_RS16530 glutamate-5-semialdehyde dehydrogenase 0.74 23
Dickeya dianthicola ME23 0.50 DZA65_RS10945 tryptophan synthase subunit beta 0.42 DZA65_RS17690 glutamate-5-semialdehyde dehydrogenase 0.63 21
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_05930 tryptophan synthase subunit beta 0.39 CSW01_11570 glutamate-5-semialdehyde dehydrogenase low > 62
Bacteroides ovatus ATCC 8483 0.50 BACOVA_03779 tryptophan synthase, beta subunit 0.32 BACOVA_03534 glutamate-5-semialdehyde dehydrogenase 0.80 18
Phocaeicola vulgatus CL09T03C04 0.49 HMPREF1058_RS07170 tryptophan synthase subunit beta 0.33 HMPREF1058_RS08645 glutamate-5-semialdehyde dehydrogenase 0.90 12
Phocaeicola dorei CL03T12C01 0.49 ABI39_RS21045 tryptophan synthase subunit beta 0.33 ABI39_RS02875 glutamate-5-semialdehyde dehydrogenase 0.77 16
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_2429 tryptophan synthase, beta subunit 0.41 B158DRAFT_1470 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) low > 40

Not shown: 2 genomes with orthologs for Psyr_0034 only; 1 genomes with orthologs for Psyr_4369 only