| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Variovorax sp. SCN45 | GFF7246 | | HtrA protease/chaperone protein | insig. | 100 | 100 |
| | Methylophilus sp. DMC18 | GFF2733 | | Periplasmic serine endoprotease DegP | cofit | 40 | 86 |
| | Variovorax sp. SCN45 | GFF7243 | | HtrA protease/chaperone protein | insig. | 47 | 77 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS07280 | | PDZ domain-containing protein | insig. | 40 | 86 |
| | Dechlorosoma suillum PS | Dsui_1606 | | periplasmic serine protease, Do/DeqQ family | insig. | 42 | 86 |
| | Ralstonia solanacearum GMI1000 | RS_RS24580 | | PDZ domain-containing protein | insig. | 41 | 86 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS22880 | | DegQ family serine endoprotease | insig. | 39 | 86 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS36165 | | peptidase | insig. | 41 | 86 |
| | Methylophilus sp. DMC18 | GFF1457 | | Periplasmic pH-dependent serine endoprotease DegQ | insig. | 38 | 92 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS16425 | | peptidase | insig. | 40 | 86 |
| | Ralstonia solanacearum UW163 | UW163_RS17165 | | peptidase | insig. | 40 | 86 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04178 | | serine protease Do | sig. | 41 | 77 |
| | Dechlorosoma suillum PS | Dsui_2455 | | periplasmic serine protease, Do/DeqQ family | cofit | 43 | 77 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF702 | | Outer membrane stress sensor protease DegS | insig. | 39 | 91 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS10180 | | DegQ family serine endoprotease | insig. | 38 | 87 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS16210 | | peptidase | strong | 41 | 77 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04358 | | serine protease Do | sig. | 39 | 79 |
| | Variovorax sp. OAS795 | ABID97_RS08345 | | DegQ family serine endoprotease | sig. | 40 | 80 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS19000 | | PDZ domain-containing protein | insig. | 37 | 87 |
| | Paraburkholderia graminis OAS925 | ABIE53_003416 | | serine protease Do | strong | 40 | 77 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS14460 | | peptidase | strong | 37 | 87 |
| | Ralstonia solanacearum UW163 | UW163_RS11925 | | peptidase | insig. | 37 | 87 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS21975 | | peptidase | insig. | 39 | 86 |
| | Variovorax sp. SCN45 | GFF1177 | | Serine protease | insig. | 36 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_003040 | | serine protease Do | strong | 38 | 79 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS14390 | | peptidase | sig. | 37 | 79 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3949 | | Outer membrane stress sensor protease DegS | insig. | 38 | 90 |
| | Variovorax sp. OAS795 | ABID97_RS14965 | | DegQ family serine endoprotease | strong | 36 | 95 |
| | Ralstonia solanacearum GMI1000 | RS_RS05240 | | PDZ domain-containing protein | sig. | 36 | 87 |
| | Variovorax sp. SCN45 | GFF789 | | protease Do | insig. | 42 | 86 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS02485 | | DegQ family serine endoprotease | insig. | 42 | 77 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS04590 | | DegQ family serine endoprotease | cofit | 37 | 81 |
| | Pseudomonas stutzeri RCH2 | Psest_3096 | | periplasmic serine protease, Do/DeqQ family | no data | 37 | 92 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3342 | | HtrA protease/chaperone protein | no data | 40 | 79 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS14065 | | serine peptidase | strong | 35 | 96 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3326 | | HtrA protease/chaperone protein | no data | 36 | 86 |
| | Variovorax sp. SCN45 | GFF3866 | | HtrA protease/chaperone protein | insig. | 40 | 80 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS14895 | | peptidase | insig. | 40 | 87 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS09640 | | peptidase | sig. | 36 | 88 |
| | Pseudomonas sp. BP01 | JOY50_RS14680 | | DegQ family serine endoprotease | insig. | 36 | 86 |
| | Pseudomonas segetis P6 | ACVTMO_RS06960 | | DegQ family serine endoprotease | strong | 37 | 86 |
| | Pseudomonas simiae WCS417 | PS417_07135 | | serine peptidase | no data | 36 | 86 |
| | Acinetobacter baumannii LAC-4 | RR41_RS04825 | | Do family serine endopeptidase | insig. | 36 | 86 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4513 | | HtrA protease/chaperone protein | sig. | 36 | 86 |
| | Pseudomonas sp. S08-1 | OH686_20060 | | HtrA protease/chaperone protein | cofit | 37 | 86 |
| | Pseudomonas putida KT2440 | PP_1430 | | putative periplasmic serine endoprotease DegP-like | strong | 36 | 86 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3955 | | Peptidase S1, chymotrypsin:PDZ/DHR/GLGF | strong | 35 | 91 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3955 | | Peptidase S1, chymotrypsin:PDZ/DHR/GLGF | strong | 35 | 91 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_03285 | | serine protease MucD | strong | 36 | 94 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1570 | | HtrA protease/chaperone protein | no data | 35 | 95 |
| | Pseudomonas orientalis W4I3 | QF045_RS09850 | | DegQ family serine endoprotease | insig. | 36 | 86 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS08670 | mucD;inference=COORDINATES | serine protease MucD | strong | 35 | 94 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS44180 | mucD;inference=COORDINATES | serine protease MucD | strong | 35 | 94 |
| | Acinetobacter radioresistens SK82 | MPMX26_02161 | | Periplasmic pH-dependent serine endoprotease DegQ | insig. | 36 | 86 |
| | Pseudomonas sp. DMC3 | GFF2280 | | Periplasmic serine endoprotease DegP | insig. | 36 | 86 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_17640 | | serine peptidase | sig. | 36 | 86 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS07245 | | DegQ family serine endoprotease | cofit | 35 | 86 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS07245 | | DegQ family serine endoprotease | strong | 35 | 86 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2753 | | HtrA protease/chaperone protein | strong | 36 | 86 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_04560 | | serine peptidase | sig. | 36 | 86 |
| | Pseudomonas sp. RS175 | PFR28_00693 | | Periplasmic serine endoprotease DegP | strong | 36 | 86 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01575 | | Periplasmic serine endoprotease DegP | cofit | 36 | 86 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_07890 | | Periplasmic serine endoprotease DegP-like | cofit | 37 | 94 |
| | Pseudomonas sp. SVBP6 | COO64_RS16540 | | DegQ family serine endoprotease | insig. | 36 | 86 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3679.1 | | Serine protease precursor MucD/AlgY associated with sigma factor RpoE | sig. | 40 | 77 |
| | Marinobacter adhaerens HP15 | HP15_779 | | serine protease MucD precursor | sig. | 40 | 78 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS08340 | | DegQ family serine endoprotease | no data | 37 | 81 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS16665 | | Do family serine endopeptidase | strong | 37 | 86 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS16950 | | Do family serine endopeptidase | strong | 37 | 86 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS11995 | | Do family serine endopeptidase | insig. | 37 | 86 |
| | Lysobacter sp. OAE881 | ABIE51_RS13880 | | DegQ family serine endoprotease | cofit | 39 | 77 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS07170 | | DegQ family serine endoprotease | insig. | 35 | 94 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3911 | | protease Do (RefSeq) | cofit | 38 | 77 |
| | Dechlorosoma suillum PS | Dsui_1669 | | trypsin-like serine protease with C-terminal PDZ domain | cofit | 35 | 89 |
| | Rhodospirillum rubrum S1H | Rru_A2201 | | Peptidase S1C, Do (NCBI) | sig. | 34 | 95 |
| | Xanthobacter sp. DMC5 | GFF3126 | | Periplasmic serine endoprotease DegP | no data | 36 | 79 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_2183 | | periplasmic serine protease, Do/DeqQ family | insig. | 35 | 86 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS17665 | | PDZ domain-containing protein | no data | 36 | 81 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37205 | | trypsin-like peptidase domain-containing protein | no data | 36 | 81 |
| | Azospirillum sp. SherDot2 | MPMX19_01249 | | Periplasmic serine endoprotease DegP | insig. | 33 | 86 |
| | Rhodopseudomonas palustris CGA009 | TX73_009940 | | Do family serine endopeptidase | sig. | 36 | 82 |
| | Dinoroseobacter shibae DFL-12 | Dshi_2733 | | protease Do (RefSeq) | strong | 35 | 84 |
| | Shewanella amazonensis SB2B | Sama_3073 | | serine protease (RefSeq) | strong | 32 | 87 |
| | Bosea sp. OAE506 | ABIE41_RS21445 | | trypsin-like peptidase domain-containing protein | insig. | 42 | 58 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4743 | | Outer membrane stress sensor protease DegS | no data | 38 | 70 |
| | Azospirillum brasilense Sp245 | AZOBR_RS06535 | | serine protease | no data | 35 | 77 |
| | Sinorhizobium meliloti 1021 | SMc02365 | | protease precursor protein | strong | 36 | 74 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1101 | | PDZ/DHR/GLGF | sig. | 38 | 66 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0308 | | protease Do (RefSeq) | strong | 33 | 87 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2974 | | Outer membrane stress sensor protease DegQ, serine protease | insig. | 32 | 79 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3283 | | periplasmic serine protease, Do/DeqQ family | insig. | 33 | 84 |
| | Rhodopseudomonas palustris CGA009 | TX73_018065 | | Do family serine endopeptidase | sig. | 34 | 78 |
| | Shewanella sp. ANA-3 | Shewana3_0690 | | peptidase Do (RefSeq) | insig. | 31 | 89 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2121 | | 2-alkenal reductase (RefSeq) | insig. | 36 | 80 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1382 | | periplasmic serine protease, Do/DeqQ family | strong | 34 | 71 |
| | Azospirillum sp. SherDot2 | MPMX19_05995 | | hypothetical protein | insig. | 35 | 77 |
| | Azospirillum sp. SherDot2 | MPMX19_02380 | | Periplasmic pH-dependent serine endoprotease DegQ | insig. | 37 | 62 |
| | Xanthobacter sp. DMC5 | GFF3166 | | Periplasmic serine endoprotease DegP | insig. | 35 | 77 |
| | Enterobacter sp. TBS_079 | MPMX20_04138 | | Periplasmic pH-dependent serine endoprotease DegQ | insig. | 33 | 84 |
| | Rhizobium sp. OAE497 | ABIE40_RS05695 | | Do family serine endopeptidase | sig. | 33 | 78 |