Homologs of GFF65 from Xanthobacter sp. DMC5

hypothetical protein
SEED: DNA repair protein RadC
KEGG: DNA repair protein RadC

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF65 hypothetical protein insig. 100 100
o Bosea sp. OAE506 ABIE41_RS13815 DNA repair protein RadC insig. 71 94
o Rhodopseudomonas palustris CGA009 TX73_002000 DNA repair protein RadC insig. 72 98
o Rhizobium sp. OAE497 ABIE40_RS08620 DNA repair protein RadC cofit 70 94
o Sinorhizobium meliloti 1021 SMc00299 DNA repair protein RadC insig. 67 94
o Agrobacterium fabrum C58 Atu1607 DNA repair protein insig. 67 96
o Dinoroseobacter shibae DFL-12 Dshi_3569 DNA repair protein RadC (RefSeq) insig. 57 98
o Phaeobacter inhibens DSM 17395 PGA1_c34550 DNA repair protein RadC insig. 59 93
o Azospirillum brasilense Sp245 AZOBR_RS04400 DNA repair protein RadC insig. 56 99
o Azospirillum sp. SherDot2 MPMX19_00291 hypothetical protein insig. 55 100
o Rhodospirillum rubrum S1H Rru_A0732 DNA repair protein RadC (NCBI) insig. 55 95
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS00510 DNA repair protein RadC insig. 52 95
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3175 DNA repair protein radc insig. 48 100
  Caulobacter crescentus NA1000 CCNA_02762 DNA repair protein RadC insig. 56 77
  Caulobacter crescentus NA1000 Δfur CCNA_02762 DNA repair protein RadC cofit 56 77
o Magnetospirillum magneticum AMB-1 AMB_RS10505 hypothetical protein cofit 54 81
o Desulfovibrio vulgaris Miyazaki F DvMF_3086 DNA repair protein RadC (RefSeq) insig. 41 97
o Fusobacterium nucleatum SB010 HUW76_05635 DNA repair protein RadC strong 34 91
o Desulfovibrio vulgaris Hildenborough JW710 DVU1193 radC DNA repair protein RadC (TIGR) sig. 41 94
o Klebsiella michiganensis M5al BWI76_RS27365 hypothetical protein insig. 34 88
o Klebsiella pneumoniae MKP103 KDGMDA_08030 DNA repair protein RadC insig. 35 88
o Cupriavidus basilensis FW507-4G11 RR42_RS16995 hypothetical protein insig. 38 88
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18725 JAB domain-containing protein cofit 32 88
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2126 DNA repair protein RadC insig. 37 88
o Herbaspirillum seropedicae SmR1 HSERO_RS05945 hypothetical protein insig. 39 85
o Pseudomonas fluorescens FW300-N2E3 AO353_09220 hypothetical protein insig. 39 88
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS04710 JAB domain-containing protein insig. 37 87
o Ralstonia solanacearum UW163 UW163_RS08960 JAB domain-containing protein insig. 37 87
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00064 hypothetical protein insig. 33 88
o Escherichia coli BL21 ECD_03495 UPF0758 family protein insig. 33 88
o Escherichia coli ECOR27 NOLOHH_07500 radC DNA repair protein RadC insig. 33 88
o Escherichia coli ECOR38 HEPCGN_14445 radC DNA repair protein RadC insig. 33 88
o Escherichia coli ECRC100 OKFHMN_15620 radC DNA repair protein RadC insig. 33 88
o Escherichia coli ECRC101 MCAODC_06130 radC DNA repair protein RadC insig. 33 88
o Escherichia coli ECRC102 NIAGMN_13380 radC DNA repair protein RadC cofit 33 88
o Escherichia coli ECRC62 BNILDI_04015 radC DNA repair protein RadC cofit 33 88
o Escherichia coli ECRC98 JDDGAC_19245 radC DNA repair protein RadC insig. 33 88
o Escherichia coli ECRC99 KEDOAH_12530 radC DNA repair protein RadC no data 33 88
o Dickeya dianthicola 67-19 HGI48_RS00700 DNA repair protein RadC insig. 34 88
o Dickeya dianthicola ME23 DZA65_RS00755 JAB domain-containing protein insig. 34 88
o Escherichia fergusonii Becca EFB2_00175 hypothetical protein insig. 33 88
o Escherichia coli Nissle 1917 ECOLIN_RS20730 DNA repair protein RadC insig. 33 88
o Escherichia coli BW25113 b3638 radC DNA repair protein (VIMSS) insig. 33 88
o Pseudomonas sp. SVBP6 COO64_RS01465 radC DNA repair protein RadC insig. 38 88
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF371 DNA repair protein RadC insig. 34 88
o Pseudomonas simiae WCS417 PS417_27770 hypothetical protein insig. 39 88
o Enterobacter sp. TBS_079 MPMX20_00097 hypothetical protein insig. 34 88
o Pseudomonas sp. DMC3 GFF403 hypothetical protein cofit 35 88
o Pantoea sp. MT58 IAI47_00620 DNA repair protein RadC insig. 31 88
o Pseudomonas stutzeri RCH2 Psest_3803 DNA repair protein radc insig. 39 88
o Pseudomonas fluorescens SBW25 PFLU_RS29445 JAB domain-containing protein insig. 38 88
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29445 JAB domain-containing protein insig. 38 88
o Erwinia tracheiphila SCR3 LU632_RS21995 radC DNA repair protein RadC insig. 32 88
o Ralstonia sp. UNC404CL21Col ABZR87_RS00330 DNA repair protein RadC insig. 37 87
o Pseudomonas syringae pv. syringae B728a Psyr_0222 DNA replication and repair protein RadC insig. 35 88
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0222 DNA replication and repair protein RadC insig. 35 88
o Paraburkholderia sabiae LMG 24235 QEN71_RS03085 DNA repair protein RadC insig. 35 95
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_07780 radC DNA repair protein RadC cofit 32 88
o Ralstonia solanacearum GMI1000 RS_RS12270 JAB domain-containing protein insig. 37 87
o Ralstonia solanacearum PSI07 RPSI07_RS12675 JAB domain-containing protein insig. 36 87
o Enterobacter asburiae PDN3 EX28DRAFT_3888 DNA repair protein radc insig. 33 88
o Dickeya dadantii 3937 DDA3937_RS20515 DNA repair protein RadC insig. 34 88
o Pseudomonas segetis P6 ACVTMO_RS00105 radC RadC family protein insig. 37 87
o Dechlorosoma suillum PS Dsui_1537 DNA repair protein radc cofit 36 88
o Pseudomonas sp. RS175 PFR28_04412 hypothetical protein insig. 37 88
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1170 DNA repair protein RadC insig. 35 89
o Erwinia amylovora T8 OLJFJH_05795 DNA repair protein RadC insig. 34 88
  Escherichia coli BW25113 b0247 ykfG CP4-6 prophage; predicted DNA repair protein (NCBI) insig. 54 47
o Paraburkholderia graminis OAS925 ABIE53_003289 DNA repair protein RadC insig. 36 87
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04066 DNA replication and repair protein RadC insig. 36 88
o Rahnella sp. WP5 EX31_RS14470 JAB domain-containing protein insig. 35 85
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4377 DNA repair protein RadC insig. 35 88
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00021 hypothetical protein cofit 37 88
o Pseudomonas fluorescens FW300-N2C3 AO356_12545 hypothetical protein insig. 35 88
o Vibrio cholerae E7946 ATCC 55056 CSW01_01155 DNA repair protein RadC insig. 39 86
o Serratia liquefaciens MT49 IAI46_24825 DNA repair protein RadC insig. 32 85
o Pseudomonas fluorescens GW456-L13 PfGW456L13_798 DNA repair protein RadC insig. 36 88
o Pectobacterium carotovorum WPP14 HER17_RS20830 DNA repair protein RadC insig. 33 88
o Methylophilus sp. DMC18 GFF1632 hypothetical protein insig. 35 87
o Pseudomonas orientalis W4I3 QF045_RS02120 DNA repair protein RadC insig. 36 88
o Pseudomonas aeruginosa MRSN321 DY961_RS12485 radC;go_function=DNA DNA repair protein RadC insig. 37 88
o Pseudomonas aeruginosa PA14 IKLFDK_26860 DNA repair protein RadC insig. 37 88
o Pseudomonas aeruginosa PUPa3 DQ20_RS49645 radC;go_function=DNA DNA repair protein RadC insig. 37 88
  Burkholderia phytofirmans PsJN BPHYT_RS15625 hypothetical protein insig. 35 87
o Kangiella aquimarina DSM 16071 B158DRAFT_0781 DNA repair protein radc insig. 33 89
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4897.1 DNA repair protein RadC insig. 36 91
o Pseudomonas putida KT2440 PP_5284 UPF0758 protein PP_5284 sig. 35 88
o Pseudomonas sp. BP01 JOY50_RS09060 radC DNA repair protein RadC insig. 35 88
  Sphingobium sp. HT1-2 GFF3478 UPF0758 family protein cofit 56 38
o Shewanella amazonensis SB2B Sama_0327 radC DNA repair protein RadC (RefSeq) cofit 34 91
  Sphingobium sp. HT1-2 GFF3477 UPF0758 family protein cofit 45 55
o Shewanella oneidensis MR-1 SO4248 radC DNA repair protein RadC (NCBI ptt file) strong 33 91
o Shewanella sp. ANA-3 Shewana3_3770 radC DNA repair protein RadC (RefSeq) strong 33 91
  Escherichia coli BW25113 b2644 yfjY CP4-57 prophage; predicted DNA repair protein (NCBI) insig. 48 47
o Marinobacter adhaerens HP15 HP15_3321 DNA repair protein RadC-like protein insig. 34 89
o Pseudomonas sp. S08-1 OH686_13620 UPF0758 family protein insig. 36 87
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS17910 DNA repair protein RadC insig. 34 87
  Escherichia fergusonii Becca EFB2_01854 hypothetical protein no data 41 64
  Escherichia coli ECOR38 HEPCGN_11065 yeeS UPF0758 protein YeeS sig. 41 64
o Castellaniella sp019104865 MT123 ABCV34_RS00910 DNA repair protein RadC insig. 35 89