Homologs of GFF5208 from Variovorax sp. SCN45

Efflux ABC transporter, permease/ATP-binding protein Reut_A2584
SEED: Lipid A export ATP-binding/permease protein MsbA
KEGG: ATP-binding cassette, subfamily B, bacterial

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF5208 Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 cofit 100 100
o Variovorax sp. OAS795 ABID97_RS06905 ABC transporter ATP-binding protein cofit 93 100
o Acidovorax sp. GW101-3H11 Ac3H11_4059 Lipid A export ATP-binding/permease protein MsbA strong 80 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS17375 ABC transporter ATP-binding protein insig. 74 98
o Herbaspirillum seropedicae SmR1 HSERO_RS10850 ABC transporter strong 75 96
o Cupriavidus basilensis FW507-4G11 RR42_RS04415 ABC transporter strong 75 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3526 Lipid A export ATP-binding/permease protein MsbA cofit 75 97
o Dechlorosoma suillum PS Dsui_2752 ABC-type multidrug transport system, ATPase and permease component insig. 71 96
o Castellaniella sp019104865 MT123 ABCV34_RS13160 ABC transporter ATP-binding protein strong 70 97
  Pseudomonas aeruginosa PA14 IKLFDK_28550 lipid A export permease/ATP-binding protein MsbA no data 39 86
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3657 Lipid A export ATP-binding/permease protein MsbA no data 38 88
  Pseudomonas aeruginosa MRSN321 DY961_RS10790 msbA;go_function=lipid lipid A export permease/ATP-binding protein MsbA no data 38 86
  Pseudomonas aeruginosa PUPa3 DQ20_RS51270 msbA;go_function=lipid lipid A export permease/ATP-binding protein MsbA no data 38 86
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1459 Lipid A export ATP-binding/permease protein MsbA no data 38 88
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2934 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain insig. 37 84
  Pseudomonas sp. SVBP6 COO64_RS05180 ABC transporter transmembrane domain-containing protein insig. 38 86
  Pseudomonas sp. S08-1 OH686_09600 lipid A export permease/ATP-binding protein MsbA no data 37 88
  Pseudomonas segetis P6 ACVTMO_RS20810 msbA lipid A export permease/ATP-binding protein MsbA no data 38 86
o Synechococcus elongatus PCC 7942 Synpcc7942_2109 ATPase sig. 36 85
  Synechococcus elongatus PCC 7942 Synpcc7942_0082 mdlB ATPase no data 36 84
  Pseudomonas fluorescens GW456-L13 PfGW456L13_196 Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) no data 40 75
  Pseudomonas stutzeri RCH2 Psest_0467 lipid A export permease/ATP-binding protein MsbA no data 37 87
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1727 ABC-type multidrug transport system, ATPase and permease components strong 34 86
o Bifidobacterium breve UCC2003 BBR_RS19845 ABC transporter ATP-binding protein cofit 32 87
o Bacteroides stercoris CC31F HMPREF1181_RS02515 ABC transporter ATP-binding protein no data 37 85
  Pseudomonas sp. RS175 PFR28_05080 Lipid A export ATP-binding/permease protein MsbA no data 39 87
  Pseudomonas putida KT2440 PP_4935 Lipid A export ATP-binding/permease protein MsbA no data 40 85
  Pseudomonas fluorescens FW300-N2C3 AO356_08865 lipid transporter ATP-binding/permease no data 39 87
  Pseudomonas sp. BP01 JOY50_RS10020 msbA lipid A export permease/ATP-binding protein MsbA no data 40 86
o Synechocystis sp000284455 PCC 6803 SGL_RS05425 ABC transporter ATP-binding protein insig. 36 86
o Cellulophaga baltica 18 M666_RS18225 ABC transporter ATP-binding protein no data 33 85
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01641 Lipid A export ATP-binding/permease protein MsbA insig. 38 85
  Pseudomonas sp. DMC3 GFF3174 Lipid A export ATP-binding/permease protein MsbA no data 38 88
  Pseudomonas orientalis W4I3 QF045_RS05370 lipid A export permease/ATP-binding protein MsbA no data 38 85
  Pseudomonas fluorescens FW300-N2E3 AO353_12955 lipid transporter ATP-binding/permease no data 38 87
o Agrobacterium fabrum C58 Atu1738 ABC transporter, nucleotide binding/ATPase protein insig. 35 85
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13260 ABC transporter strong 34 86
  Cellulophaga baltica 18 M666_RS02890 ABC transporter ATP-binding protein insig. 34 84
  Pseudomonas fluorescens SBW25 PFLU_RS07625 ABC transporter ATP-binding protein/permease insig. 37 86
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07625 ABC transporter ATP-binding protein/permease insig. 37 86
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00698 Lipid A export ATP-binding/permease protein MsbA no data 38 87
  Pseudomonas orientalis W4I3 QF045_RS10190 ABC transporter transmembrane domain-containing protein insig. 38 85
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21145 ABC transporter ATP-binding protein cofit 34 87
  Pseudomonas sp. SVBP6 COO64_RS17710 msbA lipid A export permease/ATP-binding protein MsbA no data 39 87
  Synechocystis sp000284455 PCC 6803 SGL_RS07030 ABC transporter ATP-binding protein no data 39 77
o Fusobacterium nucleatum SB010 HUW76_06745 ABC transporter ATP-binding protein insig. 34 85
  Desulfovibrio vulgaris Hildenborough JW710 DVU1671 msbA ABC transporter, ATP-binding protein/permease protein (TIGR) no data 36 89
o Pectobacterium carotovorum WPP14 HER17_RS11475 ABC transporter ATP-binding protein/permease insig. 35 86
  Pseudomonas simiae WCS417 PS417_07545 ABC transporter ATP-binding protein sig. 37 86
  Desulfovibrio vulgaris Miyazaki F DvMF_0367 ABC transporter related (RefSeq) no data 35 92
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS14130 ABC transporter ATP-binding protein cofit 34 85
  Pseudomonas fluorescens SBW25 PFLU_RS02380 lipid A export permease/ATP-binding protein MsbA no data 40 75
  Pseudomonas fluorescens SBW25-INTG PFLU_RS02380 lipid A export permease/ATP-binding protein MsbA no data 40 75
  Pseudomonas syringae pv. syringae B728a Psyr_0536 ABC transporter, transmembrane region:ABC transporter no data 39 87
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0536 ABC transporter, transmembrane region:ABC transporter no data 39 87
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1755 ABC-type multidrug transport system, ATPase and permease components strong 32 86
  Mycobacterium tuberculosis H37Rv Rv1272c Probable drugs-transport transmembrane ATP-binding protein ABC transporter strong 39 74
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22795 antibiotic ABC transporter ATP-binding protein no data 35 71
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_12740 multidrug ABC transporter ATP-binding protein no data 34 88
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17755 ABC transporter strong 34 84
  Bacteroides ovatus ATCC 8483 BACOVA_01923 ABC transporter, ATP-binding protein no data 36 78
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1191 ABC-type multidrug transport system, ATPase and permease components no data 35 84
o Marinobacter adhaerens HP15 HP15_840 ABC transporter, transmembrane region: ABC transporter insig. 33 85
  Pseudomonas simiae WCS417 PS417_02300 lipid transporter ATP-binding/permease no data 40 75
o Bacteroides thetaiotaomicron VPI-5482 BT3386 ABC transporter, ATP-binding protein (NCBI ptt file) no data 34 84
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS17210 ABC transporter ATP-binding protein no data 34 85
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2295 Lipid A export ATP-binding/permease protein MsbA insig. 37 86
  Pseudomonas syringae pv. syringae B728a Psyr_3076 Type I secretion system ATPase, HlyB insig. 36 87
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3076 Type I secretion system ATPase, HlyB insig. 36 87
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15575 antibiotic ABC transporter ATP-binding protein strong 34 86
  Magnetospirillum magneticum AMB-1 AMB_RS20685 lipid A export permease/ATP-binding protein MsbA no data 36 87
  Marinobacter adhaerens HP15 HP15_2064 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA no data 35 86
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17735 antibiotic ABC transporter ATP-binding protein cofit 33 86
  Pseudomonas syringae pv. syringae B728a Psyr_1830 ABC transporter, transmembrane region:ABC transporter sig. 38 85
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1830 ABC transporter, transmembrane region:ABC transporter insig. 38 85
  Fusobacterium nucleatum SB010 HUW76_07145 ABC transporter ATP-binding protein no data 33 85
o Rhizobium sp. OAE497 ABIE40_RS19850 ABC transporter ATP-binding protein insig. 34 88
  Serratia liquefaciens MT49 IAI46_08665 lipid A ABC transporter ATP-binding protein/permease MsbA no data 34 86
  Synechocystis sp000284455 PCC 6803 SGL_RS10630 peptidase domain-containing ABC transporter cofit 37 84
  Pseudomonas sp. BP01 JOY50_RS10125 ABC transporter ATP-binding protein insig. 35 86
  Pseudomonas putida KT2440 PP_4927 Cyclolysin secretion/processing ATP-binding protein CyaB insig. 36 86
  Pseudomonas fluorescens FW300-N2C3 AO356_02355 ABC transporter ATP-binding protein insig. 36 86
  Phocaeicola dorei CL03T12C01 ABI39_RS06190 ABC transporter ATP-binding protein no data 32 85
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10880 ABC transporter ATP-binding protein no data 32 85
  Ralstonia solanacearum PSI07 RPSI07_RS01230 type I secretion system permease/ATPase insig. 36 85
  Pseudomonas sp. RS175 PFR28_01105 Lipid A export ATP-binding/permease protein MsbA insig. 36 85
  Kangiella aquimarina DSM 16071 B158DRAFT_1598 lipid A export permease/ATP-binding protein MsbA no data 34 85
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17125 ABC transporter transmembrane domain-containing protein insig. 36 84
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1737 ABC-type multidrug transport system, ATPase and permease components insig. 33 85
  Cellulophaga baltica 18 M666_RS00295 ABC transporter ATP-binding protein insig. 33 85
  Shewanella loihica PV-4 Shew_1638 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA (RefSeq) no data 37 74
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21985 type I secretion system permease/ATPase insig. 36 85
  Ralstonia solanacearum UW163 UW163_RS22515 type I secretion system permease/ATPase insig. 36 85
  Herbaspirillum seropedicae SmR1 HSERO_RS14455 peptidase C39 insig. 36 85
  Erwinia amylovora T8 OLJFJH_16110 lipid A ABC transporter ATP-binding protein/permease MsbA no data 34 86
  Cellulophaga baltica 18 M666_RS19140 ABC transporter ATP-binding protein insig. 33 85
  Erwinia tracheiphila SCR3 LU632_RS09825 msbA lipid A ABC transporter ATP-binding protein/permease MsbA no data 34 86
  Ralstonia solanacearum GMI1000 RS_RS18565 type I secretion system permease/ATPase insig. 36 85
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14770 antibiotic ABC transporter ATP-binding protein no data 33 85
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_20310 msbA lipid A ABC transporter ATP-binding protein/permease MsbA no data 34 86