| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Sphingobium sp. HT1-2 | GFF4564 | | Putative protease | cofit | 100 | 100 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1423 | | Trypsin-like peptidase domain | insig. | 43 | 94 |
| | Dinoroseobacter shibae DFL-12 | Dshi_0895 | | peptidase S1 and S6 chymotrypsin/Hap (RefSeq) | sig. | 31 | 38 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1300 | | Outer membrane stress sensor protease DegS | insig. | 35 | 33 |
| | Mycobacterium tuberculosis H37Rv | Rv3671c | | Membrane-associated serine protease | no data | 31 | 43 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4743 | | Outer membrane stress sensor protease DegS | no data | 35 | 33 |
| | Azospirillum brasilense Sp245 | AZOBR_RS12995 | | hypothetical protein | no data | 32 | 36 |
| | Erwinia amylovora T8 | OLJFJH_00660 | | serine endoprotease DegP | sig. | 33 | 36 |
| | Escherichia coli BL21 | ECD_00160 | | serine endoprotease (protease Do), membrane-associated | strong | 32 | 35 |
| | Escherichia fergusonii Becca | EFB2_03883 | | Periplasmic serine endoprotease DegP | insig. | 32 | 35 |
| | Escherichia coli ECOR27 | NOLOHH_02600 | degP | serine endoprotease DegP | insig. | 32 | 35 |
| | Escherichia coli ECOR38 | HEPCGN_08205 | degP | serine endoprotease DegP | sig. | 32 | 35 |
| | Escherichia coli ECRC100 | OKFHMN_10255 | degP | serine endoprotease DegP | insig. | 32 | 35 |
| | Escherichia coli ECRC101 | MCAODC_00770 | degP | serine endoprotease DegP | sig. | 32 | 35 |
| | Escherichia coli ECRC102 | NIAGMN_08105 | degP | serine endoprotease DegP | sig. | 32 | 35 |
| | Escherichia coli ECRC62 | BNILDI_09070 | degP | serine endoprotease DegP | cofit | 32 | 35 |
| | Escherichia coli ECRC98 | JDDGAC_13850 | degP | serine endoprotease DegP | insig. | 32 | 35 |
| | Escherichia coli ECRC99 | KEDOAH_17900 | degP | serine endoprotease DegP | no data | 32 | 35 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03501 | | Periplasmic serine endoprotease DegP | strong | 32 | 35 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS00895 | | serine endoprotease DegP | insig. | 32 | 35 |
| | Escherichia coli BW25113 | b0161 | degP | serine endoprotease (protease Do), membrane-associated (NCBI) | strong | 32 | 35 |
| | Acinetobacter radioresistens SK82 | MPMX26_00998 | | Serine endoprotease DegS | cofit | 35 | 32 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS13980 | | Do family serine endopeptidase | strong | 30 | 35 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1312 | | serine protease precursor (NCBI ptt file) | sig. | 31 | 35 |
| | Dinoroseobacter shibae DFL-12 | Dshi_1540 | | 2-alkenal reductase (RefSeq) | sig. | 31 | 41 |
| | Rhodospirillum rubrum S1H | Rru_A3157 | | hypothetical protein (NCBI) | insig. | 31 | 37 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_00614 | | peptidase Do | strong | 31 | 35 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS17765 | | Do family serine endopeptidase | strong | 31 | 33 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3750 | | periplasmic serine protease, Do/DeqQ family | insig. | 31 | 36 |
| | Dechlorosoma suillum PS | Dsui_1426 | | periplasmic serine protease, Do/DeqQ family | cofit | 32 | 35 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c01920 | | protease DegQ | strong | 31 | 34 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF60 | | HtrA protease/chaperone protein | insig. | 31 | 35 |
| | Enterobacter sp. TBS_079 | MPMX20_00847 | | Periplasmic serine endoprotease DegP | insig. | 31 | 36 |
| | Variovorax sp. SCN45 | GFF5365 | | Outer membrane stress sensor protease DegS | insig. | 33 | 33 |
| | Rahnella sp. WP5 | EX31_RS03170 | | serine endoprotease DegP | insig. | 31 | 35 |
| | Rhodopseudomonas palustris CGA009 | TX73_009940 | | Do family serine endopeptidase | sig. | 31 | 35 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS06030 | | HhoA/HhoB/HtrA family serine endopeptidase | strong | 32 | 35 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3729 | | Serine protease precursor MucD/AlgY associated with sigma factor RpoE | insig. | 29 | 34 |
| | Rhizobium sp. OAE497 | ABIE40_RS20720 | | DegQ family serine endoprotease | cofit | 32 | 33 |
| | Klebsiella michiganensis M5al | BWI76_RS05180 | | serine endoprotease DegQ | strong | 31 | 36 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS10785 | | trypsin-like peptidase domain-containing protein | sig. | 30 | 35 |
| | Variovorax sp. OAS795 | ABID97_RS23065 | | trypsin-like peptidase domain-containing protein | strong | 33 | 33 |
| | Serratia liquefaciens MT49 | IAI46_03585 | | serine endoprotease DegP | insig. | 31 | 36 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_13425 | | serine endoprotease DegP | sig. | 30 | 35 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS16415 | | Do family serine endopeptidase | cofit | 29 | 39 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_19595 | | deoxyribonuclease HsdR | strong | 28 | 40 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS17615 | | PDZ domain-containing protein | cofit | 34 | 35 |
| | Pectobacterium carotovorum WPP14 | HER17_RS05660 | | serine endoprotease DegP | insig. | 31 | 35 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS16665 | | Do family serine endopeptidase | strong | 34 | 29 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS16950 | | Do family serine endopeptidase | strong | 34 | 29 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_07890 | | Periplasmic serine endoprotease DegP-like | insig. | 34 | 29 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS20260 | | 2-alkenal reductase | insig. | 32 | 32 |
| | Methylophilus sp. DMC18 | GFF1575 | | Periplasmic pH-dependent serine endoprotease DegQ | no data | 32 | 32 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1382 | | periplasmic serine protease, Do/DeqQ family | strong | 32 | 34 |
| | Rhodopseudomonas palustris CGA009 | TX73_017135 | | trypsin-like peptidase domain-containing protein | insig. | 31 | 33 |
| | Xanthobacter sp. DMC5 | GFF3126 | | Periplasmic serine endoprotease DegP | no data | 31 | 35 |
| | Bosea sp. OAE506 | ABIE41_RS21445 | | trypsin-like peptidase domain-containing protein | insig. | 31 | 39 |
| | Methylophilus sp. DMC18 | GFF1122 | | hypothetical protein | insig. | 26 | 41 |
| | Ralstonia solanacearum GMI1000 | RS_RS14690 | | PDZ domain-containing protein | cofit | 32 | 32 |
| | Sphingobium sp. HT1-2 | GFF4424 | | hypothetical protein | cofit | 30 | 35 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS11995 | | Do family serine endopeptidase | insig. | 34 | 29 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS21975 | | peptidase | insig. | 32 | 29 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS06745 | | 2-alkenal reductase | strong | 32 | 32 |
| | Ralstonia solanacearum UW163 | UW163_RS06870 | | 2-alkenal reductase | insig. | 32 | 32 |
| | Serratia liquefaciens MT49 | IAI46_22395 | | outer membrane-stress sensor serine endopeptidase DegS | no data | 32 | 37 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_17640 | | serine peptidase | sig. | 33 | 29 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS10490 | | PDZ domain-containing protein | insig. | 32 | 32 |
| | Acinetobacter baumannii LAC-4 | RR41_RS05700 | | trypsin-like peptidase domain-containing protein | no data | 32 | 32 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS07170 | | DegQ family serine endoprotease | insig. | 34 | 29 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01575 | | Periplasmic serine endoprotease DegP | cofit | 32 | 29 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_15145 | degP | serine endoprotease DegP | cofit | 32 | 29 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS13390 | | trypsin-like peptidase domain-containing protein | insig. | 35 | 29 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_04560 | | serine peptidase | sig. | 33 | 29 |
| | Alteromonas macleodii MIT1002 | MIT1002_00842 | | Periplasmic pH-dependent serine endoprotease DegQ precursor | cofit | 33 | 35 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS07245 | | DegQ family serine endoprotease | cofit | 32 | 29 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS07245 | | DegQ family serine endoprotease | strong | 32 | 29 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01607 | | serine protease, S1-C subfamily, contains C-terminal PDZ domain | insig. | 34 | 29 |
| | Erwinia tracheiphila SCR3 | LU632_RS20000 | degP | serine endoprotease DegP | sig. | 32 | 28 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1101 | | PDZ/DHR/GLGF | sig. | 31 | 38 |
| | Dinoroseobacter shibae DFL-12 | Dshi_2733 | | protease Do (RefSeq) | strong | 31 | 34 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS13445 | | serine endoprotease DegP | cofit | 30 | 35 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF369 | | Trypsin domain protein | insig. | 29 | 39 |
| | Pseudomonas sp. DMC3 | GFF2280 | | Periplasmic serine endoprotease DegP | insig. | 35 | 29 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS10815 | | Do family serine endopeptidase | strong | 35 | 33 |
| | Sphingobium sp. HT1-2 | GFF2902 | | HtrA protease/chaperone protein | cofit | 30 | 34 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS18840 | | 2-alkenal reductase | strong | 32 | 32 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS12650 | | trypsin-like peptidase domain-containing protein | strong | 31 | 34 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS27795 | | Do family serine endopeptidase | strong | 31 | 34 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0308 | | protease Do (RefSeq) | strong | 34 | 29 |
| | Shewanella oneidensis MR-1 | SO3942 | | serine protease, HtrA/DegQ/DegS family (NCBI ptt file) | no data | 29 | 35 |
| | Pseudomonas sp. RS175 | PFR28_00693 | | Periplasmic serine endoprotease DegP | strong | 32 | 29 |
| | Shewanella loihica PV-4 | Shew_3297 | | periplasmic serine protease DegS (RefSeq) | cofit | 33 | 29 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_0585 | | PDZ/DHR/GLGF | strong | 33 | 33 |
| | Shewanella oneidensis MR-1 | SO3943 | degS | protease DegS (NCBI ptt file) | strong | 31 | 29 |
| | Cellulophaga baltica 18 | M666_RS17810 | | trypsin-like peptidase domain-containing protein | no data | 31 | 33 |
| | Variovorax sp. SCN45 | GFF760 | | hypothetical protein | no data | 30 | 38 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS21675 | | Do family serine endopeptidase | strong | 30 | 32 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS23030 | | serine protease | sig. | 28 | 32 |
| | Dechlorosoma suillum PS | Dsui_2455 | | periplasmic serine protease, Do/DeqQ family | cofit | 34 | 29 |
| | Mycobacterium tuberculosis H37Rv | Rv0125 | | Probable serine protease PepA (serine proteinase) (MTB32A) | sig. | 34 | 30 |