Homologs of GFF3403 from Variovorax sp. SCN45

Benzoate catabolism regulator with shikimate kinase domain
SEED: Regulatory protein of benzoate catabolism
KEGG: shikimate kinase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF3403 Benzoate catabolism regulator with shikimate kinase domain sig. 100 100
o Variovorax sp. OAS795 ABID97_RS03110 helix-turn-helix transcriptional regulator strong 94 100
o Acidovorax sp. GW101-3H11 Ac3H11_3086 Regulatory protein of benzoate catabolism sig. 82 92
o Cupriavidus basilensis FW507-4G11 RR42_RS35135 transcriptional regulator insig. 74 95
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1204 Regulatory protein of benzoate catabolism strong 74 92
o Castellaniella sp019104865 MT123 ABCV34_RS00635 helix-turn-helix transcriptional regulator sig. 71 89
o Burkholderia phytofirmans PsJN BPHYT_RS13350 shikimate kinase sig. 59 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS05360 helix-turn-helix transcriptional regulator cofit 58 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00372 transcriptional regulator, XRE family with shikimate kinase activity sig. 62 89
o Paraburkholderia graminis OAS925 ABIE53_002880 XRE family aerobic/anaerobic benzoate catabolism transcriptional regulator strong 61 89
  Paraburkholderia graminis OAS925 ABIE53_005446 XRE family aerobic/anaerobic benzoate catabolism transcriptional regulator insig. 59 88
  Cupriavidus basilensis FW507-4G11 RR42_RS07515 transcriptional regulator sig. 52 94
o Rhodopseudomonas palustris CGA009 TX73_024880 helix-turn-helix transcriptional regulator cofit 43 87
o Magnetospirillum magneticum AMB-1 AMB_RS00855 helix-turn-helix domain-containing protein cofit 38 89
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04170 shikimate kinase no data 37 53
  Azospirillum sp. SherDot2 MPMX19_02640 Shikimate kinase no data 36 48
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3592 shikimate kinase (EC 2.7.1.71) no data 35 51
  Bosea sp. OAE506 ABIE41_RS06090 shikimate kinase no data 34 47
  Magnetospirillum magneticum AMB-1 AMB_RS19870 shikimate kinase no data 34 48
  Rhizobium sp. OAE497 ABIE40_RS17675 shikimate kinase no data 32 47
  Pseudomonas fluorescens FW300-N2C3 AO356_09390 shikimate kinase no data 36 49
  Alteromonas macleodii MIT1002 MIT1002_00448 Shikimate kinase 1 no data 32 50
  Kangiella aquimarina DSM 16071 B158DRAFT_0763 shikimate kinase (EC 2.7.1.71) no data 33 48
  Caulobacter crescentus NA1000 CCNA_03103 shikimate kinase (EC 2.7.1.71) (from data) strong 32 55
  Caulobacter crescentus NA1000 Δfur CCNA_03103 shikimate kinase cofit 32 55
  Agrobacterium fabrum C58 Atu3626 shikimate kinase no data 30 48
  Acidovorax sp. GW101-3H11 Ac3H11_3449 Shikimate kinase I (EC 2.7.1.71) strong 32 48
  Bacteroides stercoris CC31F HMPREF1181_RS02530 shikimate kinase strong 34 52
  Pseudomonas fluorescens FW300-N2E3 AO353_12500 shikimate kinase strong 36 49
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15995 shikimate kinase no data 36 45
  Xanthobacter sp. DMC5 GFF2949 3-dehydroquinate synthase no data 35 48
  Pseudomonas sp. SVBP6 COO64_RS13070 aroK shikimate kinase AroK no data 34 52
  Sinorhizobium meliloti 1021 SMc00695 shikimate kinase no data 30 47
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12105 shikimate kinase strong 34 46
  Variovorax sp. OAS795 ABID97_RS23260 shikimate kinase no data 31 48
  Rahnella sp. WP5 EX31_RS04725 shikimate kinase AroK strong 33 50
  Sphingobium sp. HT1-2 GFF2419 Shikimate kinase I (EC 2.7.1.71) no data 35 47
  Escherichia coli BL21 ECD_03242 shikimate kinase I strong 33 50
  Escherichia fergusonii Becca EFB2_00438 Shikimate kinase 1 strong 33 50
  Escherichia coli ECOR27 NOLOHH_08900 aroK shikimate kinase AroK insig. 33 50
  Escherichia coli ECOR38 HEPCGN_15930 aroK shikimate kinase AroK insig. 33 50
  Escherichia coli ECRC62 BNILDI_02620 aroK shikimate kinase AroK no data 33 50
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00313 Shikimate kinase 1 no data 33 50
  Escherichia coli Nissle 1917 ECOLIN_RS19365 shikimate kinase AroK no data 33 50
  Escherichia coli BW25113 b3390 aroK shikimate kinase I (NCBI) strong 33 50
  Synechococcus elongatus PCC 7942 Synpcc7942_0894 aroK shikimate kinase no data 34 46
  Pseudomonas sp. RS175 PFR28_05012 Shikimate kinase 1 no data 36 46
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3755 Shikimate kinase I (EC 2.7.1.71) no data 36 46
  Escherichia coli ECRC100 OKFHMN_17110 aroK shikimate kinase AroK sig. 33 50
  Escherichia coli ECRC101 MCAODC_07640 aroK shikimate kinase AroK strong 33 50
  Escherichia coli ECRC102 NIAGMN_14880 aroK shikimate kinase AroK strong 33 50
  Escherichia coli ECRC98 JDDGAC_20740 aroK shikimate kinase AroK strong 33 50
  Escherichia coli ECRC99 KEDOAH_11030 aroK shikimate kinase AroK no data 33 50
  Pseudomonas sp. S08-1 OH686_10020 Shikimate kinase I strong 33 48
  Pseudomonas fluorescens SBW25 PFLU_RS02025 shikimate kinase AroK no data 36 49
  Pseudomonas fluorescens SBW25-INTG PFLU_RS02025 shikimate kinase AroK no data 36 49
  Pseudomonas simiae WCS417 PS417_01980 shikimate kinase no data 36 49
  Phocaeicola dorei CL03T12C01 ABI39_RS04695 shikimate kinase strong 34 46
  Klebsiella michiganensis M5al BWI76_RS26090 shikimate kinase no data 33 50
  Pseudomonas segetis P6 ACVTMO_RS21000 aroK shikimate kinase AroK no data 32 51
  Dechlorosoma suillum PS Dsui_1094 shikimate kinase strong 31 54
  Pseudomonas orientalis W4I3 QF045_RS05045 shikimate kinase AroK no data 36 49
  Pseudomonas syringae pv. syringae B728a Psyr_0408 shikimate kinase no data 34 49
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0408 shikimate kinase no data 34 49
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS10475 shikimate kinase strong 33 46
  Rhodospirillum rubrum S1H Rru_A3740 Shikimate kinase (NCBI) no data 33 52
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0140 Shikimate kinase no data 33 46
  Klebsiella pneumoniae MKP103 KDGMDA_06915 shikimate kinase AroK no data 33 50
  Pseudomonas stutzeri RCH2 Psest_3714 Shikimate kinase no data 32 49
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_12030 aroK shikimate kinase AroK no data 31 50
  Erwinia tracheiphila SCR3 LU632_RS22870 aroK shikimate kinase AroK no data 31 50
  Enterobacter asburiae PDN3 EX28DRAFT_4152 shikimate kinase (EC 2.7.1.71) insig. 32 50
  Enterobacter sp. TBS_079 MPMX20_04279 Shikimate kinase 1 strong 32 50
  Serratia liquefaciens MT49 IAI46_23705 shikimate kinase AroK no data 31 50
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1538 Shikimate kinase I (EC 2.7.1.71) no data 36 46
  Pseudomonas sp. DMC3 GFF3099 Shikimate kinase 1 no data 34 46
  Erwinia amylovora T8 OLJFJH_04095 shikimate kinase AroK no data 31 50
  Pseudomonas fluorescens GW456-L13 PfGW456L13_276 Shikimate kinase I (EC 2.7.1.71) cofit 35 46
  Pectobacterium carotovorum WPP14 HER17_RS01775 shikimate kinase AroK no data 35 39
  Pseudomonas sp. BP01 JOY50_RS09300 aroK shikimate kinase AroK no data 34 49
  Castellaniella sp019104865 MT123 ABCV34_RS12700 shikimate kinase no data 33 57
  Pseudomonas putida KT2440 PP_5079 Shikimate kinase no data 34 49
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS07205 shikimate kinase strong 33 47
  Rhodopseudomonas palustris CGA009 TX73_002615 shikimate kinase no data 30 47
  Pantoea sp. MT58 IAI47_01890 shikimate kinase AroK no data 31 50
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS21705 shikimate kinase AroK no data 31 50
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1332 Shikimate kinase I (EC 2.7.1.71) strong 31 47
  Bacteroides thetaiotaomicron VPI-5482 BT3393 shikimate kinase (NCBI ptt file) no data 34 46
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF629 Shikimate kinase I (EC 2.7.1.71) insig. 32 46
  Phaeobacter inhibens DSM 17395 PGA1_c14090 shikimate kinase AroK no data 29 55
  Methylophilus sp. DMC18 GFF2235 Shikimate kinase 1 no data 29 53
  Vibrio cholerae E7946 ATCC 55056 CSW01_13305 shikimate kinase sig. 30 50
  Bacteroides ovatus ATCC 8483 BACOVA_01915 shikimate kinase cofit 31 54
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00629 Shikimate kinase 1 no data 35 46
  Pseudomonas aeruginosa MRSN321 DY961_RS11015 aroK;inference=COORDINATES shikimate kinase AroK no data 34 48
  Pseudomonas aeruginosa PA14 IKLFDK_28335 Shikimate kinase no data 34 48
  Pseudomonas aeruginosa PUPa3 DQ20_RS51060 aroK;inference=COORDINATES shikimate kinase AroK no data 34 48
  Marinobacter adhaerens HP15 HP15_479 shikimate kinase I no data 32 45
  Synechocystis sp000284455 PCC 6803 SGL_RS03075 shikimate kinase no data 35 46
  Shewanella loihica PV-4 Shew_0213 shikimate kinase I (RefSeq) no data 30 49