Homologs of GFF251 from Sphingobium sp. HT1-2

Site-specific tyrosine recombinase XerC
SEED: Integrase
KEGG: integrase/recombinase XerC

Top 100 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Sphingobium sp. HT1-2	GFF251		Site-specific tyrosine recombinase XerC	cofit	100	100
o	Sphingomonas koreensis DSMZ 15582	Ga0059261_2764		Site-specific recombinase XerD	sig.	73	98
o	Caulobacter crescentus NA1000	CCNA_00349		integrase/recombinase, XerC-CodV family	strong	53	96
o	Caulobacter crescentus NA1000 Δfur	CCNA_00349		integrase/recombinase, XerC-CodV family	cofit	53	96
o	Xanthobacter sp. DMC5	GFF2054		Tyrosine recombinase XerC	no data	51	97
o	Brevundimonas sp. GW460-12-10-14-LB2	A4249_RS12210		tyrosine recombinase XerC	insig.	51	96
o	Rhodopseudomonas palustris CGA009	TX73_000945		tyrosine recombinase XerC	sig.	49	96
o	Bosea sp. OAE506	ABIE41_RS07870		tyrosine recombinase XerC	strong	50	100
o	Dinoroseobacter shibae DFL-12	Dshi_5002	xerC	hypothetical protein (NCBI)	no data	48	97
o	Rhizobium sp. OAE497	ABIE40_RS17950		tyrosine recombinase XerC	insig.	48	96
o	Phaeobacter inhibens DSM 17395	PGA1_c05760		putative tyrosine recombinase XerC	strong	47	97
o	Agrobacterium fabrum C58	Atu2628		site-specific recombinase	no data	46	100
o	Magnetospirillum magneticum AMB-1	AMB_RS21485		tyrosine recombinase XerC	no data	49	97
o	Azospirillum sp. SherDot2	MPMX19_02110		Tyrosine recombinase XerC	no data	45	96
o	Sinorhizobium meliloti 1021	SMc02489		site-specific tyrosine recombinase XerC	no data	46	96
o	Azospirillum brasilense Sp245	AZOBR_RS03965		tyrosine recombinase XerC	no data	44	96
o	Rhodospirillum rubrum S1H	Rru_A1220		Phage integrase (NCBI)	no data	44	96
o	Pseudomonas syringae pv. syringae B728a	Psyr_0185		tyrosine recombinase XerC subunit	sig.	37	96
o	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_0185		tyrosine recombinase XerC subunit	sig.	37	96
o	Rhodanobacter sp. FW510-T8	OKGIIK_15325	xerC	tyrosine recombinase XerC	no data	37	99
o	Bifidobacterium breve UCC2003	BBR_RS16755		site-specific tyrosine recombinase XerD	strong	35	98
o	Pseudomonas sp. SVBP6	COO64_RS01270	xerC	tyrosine recombinase XerC	sig.	39	97
o	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS17800		tyrosine-type recombinase/integrase	insig.	33	97
o	Pseudomonas fluorescens GW456-L13	PfGW456L13_842		Tyrosine recombinase XerC	sig.	36	96
o	Rhodanobacter denitrificans MT42	LRK55_RS08300		tyrosine recombinase XerC	strong	36	99
o	Kangiella aquimarina DSM 16071	B158DRAFT_0244		tyrosine recombinase XerC subunit	strong	34	97
o	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_4416		Tyrosine recombinase XerC	strong	38	96
o	Pseudomonas fluorescens FW300-N2E3	AO353_09050		recombinase XerC	sig.	36	96
	Shewanella loihica PV-4	Shew_0770		tyrosine recombinase XerD (RefSeq)	strong	36	92
o	Dyella japonica UNC79MFTsu3.2	ABZR86_RS15025		tyrosine recombinase XerC	strong	35	96
o	Pseudomonas sp. S08-1	OH686_13785		tyrosine recombinase XerC	insig.	39	96
o	Pseudomonas fluorescens FW300-N2C3	AO356_12725		recombinase XerC	strong	37	96
o	Pseudomonas putida KT2440	PP_5230		Tyrosine recombinase XerC	strong	37	97
o	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_2171		Tyrosine recombinase XerC	insig.	37	96
	Rhodanobacter sp000427505 FW510-R12	LRK53_RS02315		tyrosine recombinase XerC	insig.	35	98
	Pseudomonas sp. DMC3	GFF370		Tyrosine recombinase XerC	cofit	37	96
	Lysobacter sp. OAE881	ABIE51_RS03035		tyrosine recombinase XerC	strong	36	97
o	Methylophilus sp. DMC18	GFF1535		Tyrosine recombinase XerC	insig.	36	95
o	Pseudomonas sp. BP01	JOY50_RS22610	xerC	tyrosine recombinase XerC	insig.	35	97
o	Acinetobacter baumannii LAC-4	RR41_RS04465		tyrosine recombinase	no data	34	93
o	Dechlorosoma suillum PS	Dsui_0651		tyrosine recombinase XerC	insig.	38	95
	Alteromonas macleodii MIT1002	MIT1002_00157		Tyrosine recombinase XerC	insig.	33	97
o	Escherichia coli ECRC100	OKFHMN_14420	xerC	tyrosine recombinase XerC	insig.	36	97
o	Escherichia coli ECRC101	MCAODC_04925	xerC	tyrosine recombinase XerC	no data	36	97
o	Escherichia coli ECRC102	NIAGMN_12175	xerC	tyrosine recombinase XerC	no data	36	97
o	Escherichia coli ECRC98	JDDGAC_18045	xerC	tyrosine recombinase XerC	no data	36	97
o	Escherichia coli ECRC99	KEDOAH_13730	xerC	tyrosine recombinase XerC	no data	36	97
o	Rhodanobacter denitrificans FW104-10B01	LRK54_RS08535		tyrosine recombinase XerC	insig.	36	99
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_1809		tyrosine recombinase XerD	insig.	31	96
o	Escherichia coli BL21	ECD_03687		site-specific tyrosine recombinase	sig.	36	97
o	Bacteroides ovatus ATCC 8483	BACOVA_01050		site-specific recombinase, phage integrase family/ribosomal subunit interface protein	insig.	32	97
	Pseudomonas sp. RS175	PFR28_04378		Tyrosine recombinase XerC	strong	37	96
	Shewanella loihica PV-4	Shew_0325		tyrosine recombinase XerC (RefSeq)	sig.	36	97
o	Acinetobacter radioresistens SK82	MPMX26_02230		Tyrosine recombinase XerC	no data	35	93
o	Pseudomonas aeruginosa PA14	IKLFDK_27050		tyrosine recombinase XerC	cofit	38	95
o	Klebsiella pneumoniae MKP103	KDGMDA_09700		tyrosine recombinase XerC	sig.	36	100
o	Escherichia fergusonii Becca	EFB2_04826		Tyrosine recombinase XerC	strong	36	97
o	Escherichia coli ECOR27	NOLOHH_06550	xerC	tyrosine recombinase XerC	insig.	36	97
o	Escherichia coli ECOR38	HEPCGN_13125	xerC	tyrosine recombinase XerC	cofit	36	97
o	Escherichia coli ECRC62	BNILDI_04985	xerC	tyrosine recombinase XerC	insig.	36	97
o	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_04239		Tyrosine recombinase XerC	insig.	36	97
o	Escherichia coli Nissle 1917	ECOLIN_RS21875		tyrosine recombinase XerC	strong	36	97
o	Escherichia coli BW25113	b3811	xerC	site-specific tyrosine recombinase XerC (NCBI)	strong	36	97
o	Acidovorax sp. GW101-3H11	Ac3H11_1995		Tyrosine recombinase XerC	sig.	36	100
o	Pseudomonas lactucae CFBP13502	GEMAOFIL_05657		Tyrosine recombinase XerC	cofit	37	95
o	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS02835		integrase	strong	30	97
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS09520		site-specific tyrosine recombinase XerD	sig.	29	98
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.847.1		Site-specific tyrosine recombinase	no data	36	97
o	Burkholderia phytofirmans PsJN	BPHYT_RS01655		tyrosine recombinase XerC	no data	35	96
	Pseudomonas segetis P6	MPMX49_04536		Tyrosine recombinase XerC	no data	36	96
o	Pseudomonas stutzeri RCH2	Psest_3767		tyrosine recombinase XerC	strong	36	96
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_00850		site-specific tyrosine recombinase XerD	no data	31	97
o	Mycobacterium tuberculosis H37Rv	Rv1701		Probable integrase/recombinase	sig.	39	96
	Cellulophaga baltica 18	M666_RS11310		site-specific tyrosine recombinase XerD	sig.	35	74
o	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_02202		integrase/recombinase XerC	no data	35	96
o	Paraburkholderia graminis OAS925	ABIE53_000426		integrase/recombinase XerC	no data	35	96
o	Parabacteroides merdae CL09T00C40	HMPREF1078_RS10885		tyrosine recombinase XerC	strong	32	97
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_0827		Site-specific recombinase XerD	insig.	32	95
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_19035		integrase	no data	31	96
o	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF547		Tyrosine recombinase XerC	sig.	37	98
o	Pseudomonas fluorescens SBW25	PFLU_RS29280		tyrosine recombinase XerC	sig.	36	95
o	Pseudomonas fluorescens SBW25-INTG	PFLU_RS29280		tyrosine recombinase XerC	strong	36	95
o	Pseudomonas simiae WCS417	PS417_27595		recombinase XerC	sig.	36	95
	Desulfovibrio vulgaris Hildenborough JW710	DVU1654	xerD	site-specific recombinase, phage integrase family (TIGR)	sig.	35	96
	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF239		Tyrosine recombinase XerC	no data	35	100
	Shewanella oneidensis MR-1	SO0950	xerD	integrase/recombinase XerD (NCBI ptt file)	strong	36	80
	Marinobacter adhaerens HP15	HP15_250		site-specific tyrosine recombinase XerC	strong	35	95
	Shewanella amazonensis SB2B	Sama_2739		integrase/recombinase XerD (RefSeq)	strong	35	92
	Alteromonas macleodii MIT1002	MIT1002_00786		Tyrosine recombinase XerD	insig.	33	94
	Phocaeicola dorei CL03T12C01	ABI39_RS07000		site-specific tyrosine recombinase XerD	sig.	31	96
	Bacteroides thetaiotaomicron VPI-5482	BT2843		integrase (NCBI ptt file)	strong	32	96
	Klebsiella michiganensis M5al	BWI76_RS01210		tyrosine recombinase XerC	strong	36	99
	Pantoea sp. MT58	IAI47_18400		tyrosine recombinase XerC	sig.	36	95
	Shewanella amazonensis SB2B	Sama_3247		integrase/recombinase XerC (RefSeq)	strong	34	97
	Rahnella sp. WP5	EX31_RS15165		tyrosine recombinase XerC	strong	32	100
	Bacteroides thetaiotaomicron VPI-5482	BT2742		integrase, site-specific recombinase (NCBI ptt file)	insig.	31	97
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS09680		site-specific tyrosine recombinase XerD	strong	31	96
o	Castellaniella sp019104865 MT123	ABCV34_RS13455		tyrosine recombinase XerC	sig.	34	97
o	Variovorax sp. SCN45	GFF4490		Site-specific tyrosine recombinase XerC	strong	33	97
	Shewanella sp. ANA-3	Shewana3_3331		tyrosine recombinase XerD (RefSeq)	strong	35	85