Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Variovorax sp. SCN45 | GFF1119 | | Ribonuclease HI (EC 3.1.26.4) | strong | 100 | 100 |
o | Variovorax sp. OAS795 | ABID97_RS14740 | | ribonuclease HI | no data | 92 | 93 |
o | Acidovorax sp. GW101-3H11 | Ac3H11_480 | | Ribonuclease HI (EC 3.1.26.4) | no data | 82 | 93 |
o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4259 | | Ribonuclease HI (EC 3.1.26.4) | no data | 80 | 89 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04397 | | RNase HI | no data | 72 | 87 |
o | Paraburkholderia graminis OAS925 | ABIE53_003009 | | ribonuclease HI | no data | 72 | 87 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS14220 | | ribonuclease H | no data | 71 | 87 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS04750 | | ribonuclease HI | no data | 71 | 87 |
o | Ralstonia sp. UNC404CL21Col | ABZR87_RS14175 | | ribonuclease HI | no data | 68 | 91 |
o | Herbaspirillum seropedicae SmR1 | HSERO_RS17110 | | ribonuclease H | strong | 67 | 89 |
o | Cupriavidus basilensis FW507-4G11 | RR42_RS13580 | | ribonuclease H | no data | 67 | 92 |
o | Ralstonia solanacearum PSI07 | RPSI07_RS15220 | | ribonuclease HI | no data | 67 | 91 |
o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS02225 | | ribonuclease HI | no data | 67 | 91 |
o | Ralstonia solanacearum UW163 | UW163_RS15535 | | ribonuclease HI | no data | 67 | 91 |
o | Ralstonia solanacearum GMI1000 | RS_RS07595 | | ribonuclease H | no data | 67 | 91 |
o | Marinobacter adhaerens HP15 | HP15_1803 | | ribonuclease Hi chain A-like protein | no data | 66 | 91 |
o | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS05650 | | ribonuclease HI | no data | 67 | 88 |
o | Kangiella aquimarina DSM 16071 | B158DRAFT_1063 | | Ribonuclease HI | no data | 66 | 91 |
o | Pseudomonas syringae pv. syringae B728a | Psyr_1763 | | RNase HI | no data | 65 | 90 |
o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1763 | | RNase HI | no data | 65 | 90 |
o | Dechlorosoma suillum PS | Dsui_2482 | | ribonuclease HI | no data | 64 | 88 |
o | Caulobacter crescentus NA1000 | CCNA_03476 | | ribonuclease HI | strong | 63 | 92 |
o | Caulobacter crescentus NA1000 Δfur | CCNA_03476 | | ribonuclease HI | cofit | 63 | 92 |
o | Azospirillum sp. SherDot2 | MPMX19_01081 | | Ribonuclease HI | no data | 61 | 91 |
o | Pseudomonas sp. S08-1 | OH686_03570 | | Ribonuclease HI | no data | 63 | 88 |
o | Castellaniella sp019104865 MT123 | ABCV34_RS10475 | | ribonuclease HI | no data | 64 | 88 |
o | Pseudomonas fluorescens FW300-N2E3 | AO353_23500 | | ribonuclease H | no data | 63 | 90 |
o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3338 | | Ribonuclease HI (EC 3.1.26.4) | no data | 63 | 90 |
o | Pseudomonas fluorescens SBW25 | PFLU_RS12920 | | ribonuclease HI | no data | 63 | 90 |
o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS12920 | | ribonuclease HI | no data | 63 | 90 |
o | Pseudomonas sp. RS175 | PFR28_01554 | | Ribonuclease HI | no data | 63 | 90 |
o | Pseudomonas fluorescens FW300-N2C3 | AO356_24490 | | ribonuclease H | no data | 63 | 90 |
o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_589 | | Ribonuclease HI (EC 3.1.26.4) | no data | 63 | 90 |
o | Pseudomonas putida KT2440 | PP_4142 | | ribonuclease H | no data | 61 | 89 |
o | Pseudomonas stutzeri RCH2 | Psest_2073 | | Ribonuclease HI | no data | 64 | 87 |
o | Azospirillum brasilense Sp245 | AZOBR_RS10505 | | ribonuclease H | insig. | 64 | 86 |
o | Pseudomonas simiae WCS417 | PS417_12230 | | ribonuclease H | no data | 63 | 90 |
o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4598 | | Ribonuclease HI (EC 3.1.26.4) | no data | 62 | 90 |
o | Rhodopseudomonas palustris CGA009 | TX73_022115 | | ribonuclease HI | no data | 64 | 87 |
o | Agrobacterium fabrum C58 | Atu0776 | | ribonuclease H | no data | 62 | 89 |
o | Rhodospirillum rubrum S1H | Rru_A3054 | | Ribonuclease H (NCBI) | insig. | 59 | 93 |
o | Magnetospirillum magneticum AMB-1 | AMB_RS03905 | | ribonuclease H | cofit | 60 | 87 |
o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3252 | | Ribonuclease HI | no data | 62 | 89 |
o | Sinorhizobium meliloti 1021 | SMc00018 | | ribonuclease H | no data | 58 | 89 |
o | Erwinia tracheiphila SCR3 | LU632_RS01090 | rnhA | ribonuclease HI | insig. | 60 | 86 |
o | Rhizobium sp. OAE497 | ABIE40_RS04115 | | ribonuclease HI | insig. | 60 | 89 |
o | Bosea sp. OAE506 | ABIE41_RS23050 | | ribonuclease HI | no data | 60 | 87 |
o | Shewanella loihica PV-4 | Shew_2112 | | ribonuclease H (RefSeq) | insig. | 57 | 89 |
o | Escherichia coli BL21 | ECD_00207 | | ribonuclease HI | no data | 61 | 86 |
o | Escherichia fergusonii Becca | EFB2_03829 | | Ribonuclease HI | sig. | 61 | 86 |
o | Escherichia coli ECOR27 | NOLOHH_02315 | rnhA | ribonuclease HI | cofit | 61 | 86 |
o | Escherichia coli ECOR38 | HEPCGN_07910 | rnhA | ribonuclease HI | cofit | 61 | 86 |
o | Escherichia coli ECRC100 | OKFHMN_09970 | rnhA | ribonuclease HI | cofit | 61 | 86 |
o | Escherichia coli ECRC101 | MCAODC_00485 | rnhA | ribonuclease HI | insig. | 61 | 86 |
o | Escherichia coli ECRC102 | NIAGMN_07820 | rnhA | ribonuclease HI | no data | 61 | 86 |
o | Escherichia coli ECRC62 | BNILDI_09355 | rnhA | ribonuclease HI | cofit | 61 | 86 |
o | Escherichia coli ECRC98 | JDDGAC_13565 | rnhA | ribonuclease HI | cofit | 61 | 86 |
o | Escherichia coli ECRC99 | KEDOAH_18185 | rnhA | ribonuclease HI | no data | 61 | 86 |
o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03447 | | Ribonuclease HI | cofit | 61 | 86 |
o | Escherichia coli BW25113 | b0214 | rnhA | ribonuclease H (NCBI) | no data | 61 | 86 |
o | Pantoea sp. MT58 | IAI47_15330 | | ribonuclease HI | no data | 58 | 88 |
o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4033.1 | | Ribonuclease HI (EC 3.1.26.4) | no data | 58 | 86 |
o | Lysobacter sp. OAE881 | ABIE51_RS14100 | | ribonuclease HI | no data | 55 | 93 |
o | Escherichia coli Nissle 1917 | ECOLIN_RS01170 | | ribonuclease HI | no data | 61 | 86 |
o | Shewanella amazonensis SB2B | Sama_1881 | rnhA | ribonuclease H (RefSeq) | strong | 58 | 89 |
o | Serratia liquefaciens MT49 | IAI46_04145 | | ribonuclease HI | no data | 57 | 89 |
| Dickeya dadantii 3937 | DDA3937_RS16050 | | ribonuclease HI | insig. | 57 | 88 |
o | Enterobacter asburiae PDN3 | EX28DRAFT_2680 | | Ribonuclease HI | no data | 60 | 85 |
o | Shewanella sp. ANA-3 | Shewana3_2366 | rnhA | ribonuclease H (RefSeq) | insig. | 56 | 91 |
o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4046 | | Ribonuclease HI (EC 3.1.26.4) | no data | 60 | 86 |
o | Klebsiella michiganensis M5al | BWI76_RS05450 | | ribonuclease HI | strong | 59 | 86 |
o | Rhodanobacter sp. FW510-T8 | OKGIIK_07990 | rnhA | ribonuclease HI | no data | 55 | 93 |
o | Enterobacter sp. TBS_079 | MPMX20_00899 | | Ribonuclease HI | insig. | 59 | 85 |
o | Phaeobacter inhibens DSM 17395 | PGA1_c00930 | | ribonuclease H | no data | 58 | 89 |
| Dickeya dianthicola ME23 | DZA65_RS17255 | | ribonuclease HI | insig. | 56 | 88 |
o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS07275 | | ribonuclease HI | no data | 55 | 90 |
o | Rhodanobacter denitrificans MT42 | LRK55_RS16500 | | ribonuclease HI | no data | 54 | 93 |
o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS16775 | | ribonuclease HI | no data | 54 | 93 |
| Dickeya dianthicola 67-19 | HGI48_RS16170 | | ribonuclease HI | insig. | 56 | 88 |
o | Vibrio cholerae E7946 ATCC 55056 | CSW01_11385 | | ribonuclease HI | no data | 55 | 88 |
o | Dinoroseobacter shibae DFL-12 | Dshi_0182 | | ribonuclease H (RefSeq) | no data | 55 | 89 |
o | Rahnella sp. WP5 | EX31_RS21190 | | ribonuclease HI | cofit | 56 | 88 |
o | Pectobacterium carotovorum WPP14 | HER17_RS05465 | | ribonuclease HI | no data | 57 | 85 |
o | Alteromonas macleodii MIT1002 | MIT1002_01690 | | Ribonuclease HI | cofit | 56 | 88 |
o | Desulfovibrio vulgaris Hildenborough JW710 | DVU0689 | rnhA | ribonuclease HI (TIGR) | insig. | 54 | 88 |
o | Shewanella oneidensis MR-1 | SO2560 | rnhA | ribonuclease HI (NCBI ptt file) | no data | 55 | 89 |
o | Desulfovibrio vulgaris Miyazaki F | DvMF_2669 | rnhA | ribonuclease H (RefSeq) | strong | 54 | 88 |
| Acinetobacter radioresistens SK82 | MPMX26_02275 | | Ribonuclease H | cofit | 53 | 89 |
| Synechococcus elongatus PCC 7942 | Synpcc7942_2183 | rnhA | RNase HI | sig. | 51 | 83 |
| Sinorhizobium meliloti 1021 | SMc02327 | | ribonuclease HI protein | insig. | 51 | 90 |
o | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1813 | | Ribonuclease HI | insig. | 50 | 84 |
o | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS05225 | | ribonuclease HI | no data | 48 | 84 |
o | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_00830 | | ribonuclease HI | no data | 42 | 84 |
| Alteromonas macleodii MIT1002 | MIT1002_02476 | | Ribonuclease HI | insig. | 42 | 89 |
o | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS09645 | | ribonuclease HI | no data | 50 | 86 |
| Bifidobacterium breve UCC2003 | BBR_RS18725 | | ribonuclease HI | strong | 41 | 84 |
| Variovorax sp. OAS795 | ABID97_RS09575 | | ribonuclease H | insig. | 40 | 84 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_02640 | | ribonuclease H | insig. | 49 | 46 |
| Shewanella loihica PV-4 | Shew_1682 | | ribonuclease H (RefSeq) | insig. | 34 | 86 |
| Agrobacterium fabrum C58 | Atu3177 | | ribonuclease H | insig. | 34 | 83 |