Homologs of GFF104 from Xanthobacter sp. DMC5

hypothetical protein
SEED: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy

124 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF104 hypothetical protein insig. 100 100
o Bosea sp. OAE506 ABIE41_RS08035 ComF family protein insig. 54 91
o Rhizobium sp. OAE497 ABIE40_RS17355 ComF family protein insig. 49 99
o Rhodopseudomonas palustris CGA009 TX73_003090 ComF family protein insig. 53 90
o Sinorhizobium meliloti 1021 SMc02444 hypothetical protein insig. 50 91
o Agrobacterium fabrum C58 Atu3512 competence protein F insig. 47 92
o Magnetospirillum magneticum AMB-1 AMB_RS08105 amidophosphoribosyltransferase insig. 46 87
o Rhodospirillum rubrum S1H Rru_A0737 Phosphoribosyltransferase (NCBI) cofit 47 93
o Azospirillum sp. SherDot2 MPMX19_02427 hypothetical protein insig. 43 87
o Azospirillum brasilense Sp245 AZOBR_RS02910 phosphoribosyltransferase insig. 47 90
o Phaeobacter inhibens DSM 17395 PGA1_c34720 phosphoribosyl transferase-like protein sig. 41 89
o Sphingobium sp. HT1-2 GFF2534 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy cofit 42 89
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3601 Predicted amidophosphoribosyltransferases insig. 43 90
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13555 ComF family protein insig. 43 93
o Caulobacter crescentus NA1000 CCNA_00873 amidophosphoribosyltransferase family protein sig. 40 92
o Caulobacter crescentus NA1000 Δfur CCNA_00873 amidophosphoribosyltransferase family protein cofit 40 92
  Dinoroseobacter shibae DFL-12 Dshi_3500 competence protein F, putative (RefSeq) insig. 38 92
  Bacteroides stercoris CC31F HMPREF1181_RS00975 ComF family protein insig. 32 89
  Bacteroides thetaiotaomicron VPI-5482 BT2800 putative amidophosphoribosyl-transferase (NCBI ptt file) insig. 30 91
  Bacteroides ovatus ATCC 8483 BACOVA_02030 comF family protein cofit 28 91
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19150 amidophosphoribosyltransferase insig. 32 92
  Pseudomonas simiae WCS417 PS417_26010 amidophosphoribosyltransferase insig. 31 87
  Pseudomonas sp. DMC3 GFF77 hypothetical protein cofit 32 87
  Variovorax sp. SCN45 GFF2294 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 41 66
  Pseudomonas fluorescens SBW25 PFLU_RS27655 ComF family protein insig. 30 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27655 ComF family protein insig. 30 87
  Methylophilus sp. DMC18 GFF1681 hypothetical protein insig. 31 84
  Variovorax sp. OAS795 ABID97_RS23980 ComF family protein insig. 38 66
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1053 Predicted amidophosphoribosyltransferases insig. 32 89
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2485 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 36 69
  Rhodanobacter denitrificans MT42 LRK55_RS09910 ComF family protein insig. 35 89
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10270 ComF family protein insig. 35 89
  Pseudomonas syringae pv. syringae B728a Psyr_4688 Phosphoribosyltransferase insig. 29 86
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4688 Phosphoribosyltransferase insig. 29 86
  Marinobacter adhaerens HP15 HP15_2487 competence protein ComF insig. 34 85
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09600 ComF family protein insig. 38 57
  Pseudomonas sp. RS175 PFR28_04104 hypothetical protein insig. 33 92
  Phocaeicola dorei CL03T12C01 ABI39_RS07080 ComF family protein insig. 32 89
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15860 ComF family protein insig. 36 85
  Lysobacter sp. OAE881 ABIE51_RS01135 ComF family protein insig. 34 91
  Kangiella aquimarina DSM 16071 B158DRAFT_0863 Predicted amidophosphoribosyltransferases insig. 29 86
  Herbaspirillum seropedicae SmR1 HSERO_RS20810 amidophosphoribosyltransferase strong 34 87
  Pseudomonas orientalis W4I3 QF045_RS00420 ComF family protein cofit 31 87
  Pseudomonas putida KT2440 PP_0361 putative Competence protein ComF insig. 38 65
  Rhodanobacter sp. FW510-T8 OKGIIK_13640 Competence protein ComF insig. 35 89
  Dechlorosoma suillum PS Dsui_1296 putative amidophosphoribosyltransferase cofit 33 89
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05323 hypothetical protein insig. 31 87
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1146 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 30 93
  Pseudomonas segetis P6 ACVTMO_RS03755 ComF family protein insig. 28 87
  Pseudomonas sp. BP01 JOY50_RS17925 ComF family protein insig. 31 87
  Burkholderia phytofirmans PsJN BPHYT_RS02625 competence protein ComF sig. 35 90
  Pseudomonas fluorescens FW300-N2E3 AO353_07530 amidophosphoribosyltransferase insig. 29 93
  Pseudomonas stutzeri RCH2 Psest_0410 Predicted amidophosphoribosyltransferases insig. 34 82
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11300 phosphoribosyltransferase family protein insig. 28 88
  Pseudomonas aeruginosa MRSN321 DY961_RS22450 ComF family protein sig. 33 88
  Pseudomonas aeruginosa PA14 IKLFDK_22980 amidophosphoribosyltransferase sig. 33 88
  Pseudomonas aeruginosa PUPa3 DQ20_RS36875 ComF family protein sig. 33 88
  Serratia liquefaciens MT49 IAI46_23830 DNA utilization protein GntX insig. 34 88
  Dickeya dianthicola 67-19 HGI48_RS19780 DNA utilization protein GntX insig. 32 86
  Dickeya dianthicola ME23 DZA65_RS20870 DNA utilization protein GntX insig. 32 86
  Ralstonia solanacearum PSI07 RPSI07_RS22380 amidophosphoribosyltransferase strong 36 84
  Dickeya dadantii 3937 DDA3937_RS19650 DNA utilization protein GntX insig. 34 75
  Vibrio cholerae E7946 ATCC 55056 CSW01_13720 DNA utilization protein GntX insig. 30 88
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS03050 ComF family protein insig. 35 89
  Pseudomonas sp. SVBP6 COO64_RS22730 ComF family protein insig. 31 87
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.506.1 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 40 67
  Klebsiella michiganensis M5al BWI76_RS26625 gluconate transporter periplasmic gluconate-binding protein insig. 31 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS01480 ComF family protein insig. 34 92
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4758 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 32 93
  Rahnella sp. WP5 EX31_RS04920 DNA utilization protein GntX insig. 28 82
  Pseudomonas fluorescens FW300-N2C3 AO356_14130 amidophosphoribosyltransferase insig. 33 87
  Pantoea sp. MT58 IAI47_01785 DNA utilization protein GntX insig. 30 88
  Pectobacterium carotovorum WPP14 HER17_RS01550 DNA utilization protein GntX insig. 31 83
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00650 ComF family protein insig. 30 85
  Paraburkholderia graminis OAS925 ABIE53_000670 ComF family protein insig. 34 83
  Desulfovibrio vulgaris Miyazaki F DvMF_2857 phosphoribosyltransferase (RefSeq) insig. 41 66
  Acidovorax sp. GW101-3H11 Ac3H11_3895 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 39 59
  Acinetobacter baumannii LAC-4 RR41_RS02070 ComF family protein insig. 28 90
  Pseudomonas sp. S08-1 OH686_10360 Competence protein F-related, phosphoribosyltransferase domain / protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 29 87
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS10930 amidophosphoribosyltransferase no data 35 84
  Ralstonia solanacearum UW163 UW163_RS02650 amidophosphoribosyltransferase insig. 35 84
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01997 comF family protein insig. 32 84
  Shewanella amazonensis SB2B Sama_3504 competence protein ComF (RefSeq) insig. 30 84
  Cupriavidus basilensis FW507-4G11 RR42_RS01860 amidophosphoribosyltransferase insig. 33 85
  Cellulophaga baltica 18 M666_RS03640 phosphoribosyltransferase family protein cofit 26 89
  Escherichia coli ECRC100 OKFHMN_16995 gntX DNA utilization protein GntX cofit 28 88
  Escherichia coli ECRC101 MCAODC_07525 gntX DNA utilization protein GntX insig. 28 88
  Escherichia coli ECRC102 NIAGMN_14765 gntX DNA utilization protein GntX insig. 28 88
  Escherichia coli ECRC98 JDDGAC_20625 gntX DNA utilization protein GntX insig. 28 88
  Escherichia coli ECRC99 KEDOAH_11145 gntX DNA utilization protein GntX no data 28 88
  Escherichia coli BW25113 b3413 yhgH orf, hypothetical protein (VIMSS) insig. 28 88
  Escherichia coli ECOR27 NOLOHH_08780 gntX DNA utilization protein GntX insig. 28 88
  Escherichia coli BL21 ECD_03265 DNA catabolic protein insig. 28 88
  Escherichia coli ECRC62 BNILDI_02735 gntX DNA utilization protein GntX cofit 28 88
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00290 hypothetical protein sig. 28 88
  Shewanella sp. ANA-3 Shewana3_4009 competence protein ComF (RefSeq) insig. 29 82
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF604 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 31 81
  Escherichia coli ECOR38 HEPCGN_15805 gntX DNA utilization protein GntX insig. 28 88
  Escherichia coli Nissle 1917 ECOLIN_RS19495 DNA utilization protein GntX insig. 28 88
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17250 competence protein strong 38 48
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF685 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 44 57
  Shewanella loihica PV-4 Shew_3629 competence protein ComF (RefSeq) insig. 30 80
  Escherichia fergusonii Becca EFB2_00415 Putative ribose-phosphate pyrophosphokinase insig. 28 88
  Castellaniella sp019104865 MT123 ABCV34_RS14240 phosphoribosyltransferase family protein insig. 33 83
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_11920 Phosphoribosyltransferase cofit 29 88
  Erwinia tracheiphila SCR3 LU632_RS22980 phosphoribosyltransferase insig. 29 88
  Ralstonia sp. UNC404CL21Col ABZR87_RS06780 ComF family protein insig. 37 84
  Ralstonia solanacearum GMI1000 RS_RS01770 amidophosphoribosyltransferase insig. 33 84
  Shewanella oneidensis MR-1 SO4625 comF competence protein ComF (NCBI ptt file) insig. 32 82
  Klebsiella pneumoniae MKP103 KDGMDA_07020 DNA utilization protein GntX sig. 30 83
  Klebsiella pneumoniae MRSN742743 KFA93_RS10115 gntX;go_process=nucleoside DNA utilization protein GntX insig. 30 83
  Fusobacterium nucleatum SB010 HUW76_08555 ComF family protein strong 24 91
  Erwinia amylovora T8 OLJFJH_04185 DNA utilization protein GntX insig. 27 92
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18305 DNA utilization protein GntX cofit 36 45
  Enterobacter asburiae PDN3 EX28DRAFT_4129 Predicted amidophosphoribosyltransferases insig. 33 46
  Desulfovibrio vulgaris Hildenborough JW710 DVU2768 comF family protein (TIGR) insig. 35 51
  Synechococcus elongatus PCC 7942 Synpcc7942_2404 hypothetical protein insig. 34 53
  Enterobacter sp. TBS_079 MPMX20_04300 Putative ribose-phosphate pyrophosphokinase insig. 29 61
  Acinetobacter radioresistens SK82 MPMX26_02733 hypothetical protein insig. 26 83
  Alteromonas macleodii MIT1002 MIT1002_04017 DNA utilization protein GntX insig. 29 52
  Bifidobacterium breve UCC2003 BBR_RS14225 ComF family protein insig. 32 60
  Rhodanobacter denitrificans MT42 LRK55_RS02590 ComF family protein cofit 27 70
  Pseudomonas aeruginosa PUPa3 DQ20_RS60850 HAD-IIIA family hydrolase insig. 39 27
  Rhodopseudomonas palustris CGA009 TX73_021500 ribose-phosphate pyrophosphokinase insig. 55 15