Homologs of CSW01_18190 from Vibrio cholerae E7946 ATCC 55056

exoribonuclease 2
SEED: Exoribonuclease II (EC 3.1.13.1)
KEGG: exoribonuclease II

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_18190 exoribonuclease 2 insig. 100 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2698 Exoribonuclease II (EC 3.1.13.1) strong 53 96
o Pectobacterium carotovorum WPP14 HER17_RS09430 exoribonuclease II strong 52 96
o Escherichia coli Nissle 1917 ECOLIN_RS07765 exoribonuclease II no data 53 96
o Escherichia fergusonii Becca EFB2_02638 Exoribonuclease 2 sig. 53 96
o Escherichia coli ECOR27 NOLOHH_20185 rnb exoribonuclease II insig. 53 96
o Escherichia coli ECOR38 HEPCGN_25680 rnb exoribonuclease II strong 53 96
o Escherichia coli BW25113 b1286 rnb exoribonuclease II (NCBI) strong 53 96
o Escherichia coli ECRC62 BNILDI_18335 rnb exoribonuclease II cofit 53 96
o Escherichia coli ECRC100 OKFHMN_02520 rnb exoribonuclease II cofit 53 96
o Escherichia coli ECRC101 MCAODC_15750 rnb exoribonuclease II strong 53 96
o Escherichia coli ECRC102 NIAGMN_26690 rnb exoribonuclease II sig. 53 96
o Escherichia coli ECRC98 JDDGAC_05065 rnb exoribonuclease II sig. 53 96
o Escherichia coli ECRC99 KEDOAH_26245 rnb exoribonuclease II no data 53 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02395 Exoribonuclease 2 sig. 53 96
o Escherichia coli BL21 ECD_01263 ribonuclease II cofit 53 96
o Dickeya dadantii 3937 DDA3937_RS12490 exoribonuclease II strong 52 96
o Klebsiella pneumoniae MKP103 KDGMDA_19680 exoribonuclease II strong 53 96
o Serratia liquefaciens MT49 IAI46_13870 exoribonuclease II insig. 53 96
o Dickeya dianthicola 67-19 HGI48_RS12545 exoribonuclease II cofit 52 96
o Enterobacter asburiae PDN3 EX28DRAFT_0961 exoribonuclease II cofit 52 96
o Enterobacter sp. TBS_079 MPMX20_02487 Exoribonuclease 2 strong 52 96
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS06855 exoribonuclease II cofit 52 96
o Dickeya dianthicola ME23 DZA65_RS12995 exoribonuclease II sig. 52 96
o Pantoea sp. MT58 IAI47_09320 exoribonuclease II sig. 52 96
o Erwinia amylovora T8 OLJFJH_13600 exoribonuclease II cofit 52 96
o Klebsiella michiganensis M5al BWI76_RS11990 exoribonuclease II sig. 52 96
o Rahnella sp. WP5 EX31_RS07155 exoribonuclease II insig. 51 96
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_23355 exoribonuclease II no data 50 96
o Erwinia tracheiphila SCR3 LU632_RS12255 exoribonuclease II no data 50 96
  Marinobacter adhaerens HP15 HP15_3552 exoribonuclease R strong 33 87
  Dechlorosoma suillum PS Dsui_3128 ribonuclease R cofit 28 87
  Lysobacter sp. OAE881 ABIE51_RS07475 ribonuclease R cofit 28 95
  Shewanella loihica PV-4 Shew_3289 ribonuclease R (RefSeq) strong 28 92
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3370.1 3'-to-5' exoribonuclease RNase R strong 31 74
  Alteromonas macleodii MIT1002 MIT1002_03606 Ribonuclease R cofit 27 92
  Azospirillum brasilense Sp245 AZOBR_RS16165 ribonuclease R insig. 27 91
  Rhodanobacter denitrificans MT42 LRK55_RS00235 ribonuclease R strong 29 76
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00495 ribonuclease R strong 29 76
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08270 ribonuclease R strong 28 76
  Shewanella oneidensis MR-1 SO3935 vacB ribonuclease R (NCBI ptt file) strong 28 92
  Rhodanobacter sp. FW510-T8 OKGIIK_06755 rnr ribonuclease R strong 30 74
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS09655 ribonuclease R cofit 30 74
  Herbaspirillum seropedicae SmR1 HSERO_RS09290 ribonuclease R strong 29 74
  Shewanella sp. ANA-3 Shewana3_0697 RNAse R (RefSeq) strong 28 92
  Pseudomonas aeruginosa PUPa3 DQ20_RS51590 rnr;go_function=RNA ribonuclease R strong 27 92
  Pseudomonas aeruginosa MRSN321 DY961_RS10465 rnr;go_function=RNA ribonuclease R strong 27 92
  Pseudomonas aeruginosa PA14 IKLFDK_28865 ribonuclease R strong 27 92
  Ralstonia sp. UNC404CL21Col ABZR87_RS10985 ribonuclease R sig. 29 73
  Burkholderia phytofirmans PsJN BPHYT_RS08455 ribonuclease R sig. 28 78
  Pseudomonas stutzeri RCH2 Psest_0691 ribonuclease R strong 27 80
  Pseudomonas sp. SVBP6 COO64_RS17955 rnr ribonuclease R insig. 26 92
  Enterobacter asburiae PDN3 EX28DRAFT_3376 ribonuclease R strong 26 95
  Azospirillum sp. SherDot2 MPMX19_01812 Ribonuclease R insig. 30 67
  Methylophilus sp. DMC18 GFF635 Ribonuclease R insig. 27 93
  Paraburkholderia graminis OAS925 ABIE53_001940 ribonuclease R strong 27 80
  Ralstonia solanacearum GMI1000 RS_RS06155 ribonuclease R strong 28 73
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00712 RNAse R strong 29 76
  Ralstonia solanacearum PSI07 RPSI07_RS18030 ribonuclease R strong 28 73
  Pseudomonas orientalis W4I3 QF045_RS05605 ribonuclease R strong 28 80
  Pseudomonas simiae WCS417 PS417_02555 exoribonuclease R strong 27 80
  Serratia liquefaciens MT49 IAI46_01660 ribonuclease R strong 26 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 strong 26 95
  Pseudomonas segetis P6 ACVTMO_RS20555 rnr ribonuclease R strong 27 80
  Enterobacter sp. TBS_079 MPMX20_00460 Ribonuclease R sig. 27 95
  Marinobacter adhaerens HP15 HP15_622 exoribonuclease R strong 26 80
  Klebsiella pneumoniae MKP103 KDGMDA_11075 ribonuclease R cofit 26 95
  Erwinia amylovora T8 OLJFJH_02470 ribonuclease R strong 26 95
  Magnetospirillum magneticum AMB-1 AMB_RS04465 ribonuclease R cofit 30 67
  Escherichia coli BL21 ECD_04046 exoribonuclease R, RNase R insig. 26 95
  Escherichia coli BW25113 b4179 vacB putative enzyme (VIMSS) strong 26 95
  Rhizobium sp. OAE497 ABIE40_RS07350 ribonuclease R insig. 29 70
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00747 Ribonuclease R cofit 27 80
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3607 3'-to-5' exoribonuclease RNase R strong 27 80
  Escherichia coli ECOR27 NOLOHH_04485 rnr ribonuclease R insig. 26 95
  Escherichia coli ECRC62 BNILDI_07005 rnr ribonuclease R cofit 26 95
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03863 Ribonuclease R cofit 26 95
  Pseudomonas fluorescens FW300-N2C3 AO356_08610 exoribonuclease R strong 27 80
  Pseudomonas sp. BP01 JOY50_RS17320 rnr ribonuclease R insig. 26 80
  Escherichia coli ECRC100 OKFHMN_12220 rnr ribonuclease R cofit 26 95
  Escherichia coli ECRC101 MCAODC_02735 rnr ribonuclease R sig. 26 95
  Escherichia coli ECRC102 NIAGMN_10070 rnr ribonuclease R cofit 26 95
  Escherichia coli ECRC98 JDDGAC_15860 rnr ribonuclease R cofit 26 95
  Escherichia coli ECRC99 KEDOAH_15935 rnr ribonuclease R no data 26 95
  Shewanella amazonensis SB2B Sama_3067 exoribonuclease II (RefSeq) strong 26 92
  Dickeya dadantii 3937 DDA3937_RS17260 ribonuclease R sig. 26 99
  Pseudomonas sp. DMC3 GFF3229 Ribonuclease R sig. 27 80
  Escherichia coli ECOR38 HEPCGN_10450 rnr ribonuclease R cofit 26 95
  Escherichia fergusonii Becca EFB2_04356 Ribonuclease R insig. 26 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS22925 ribonuclease R strong 28 74
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15345 ribonuclease R strong 28 73
  Ralstonia solanacearum UW163 UW163_RS12810 ribonuclease R insig. 28 73
  Pseudomonas fluorescens SBW25 PFLU_RS02625 ribonuclease R cofit 27 80
  Pseudomonas fluorescens SBW25-INTG PFLU_RS02625 ribonuclease R strong 27 80
  Dickeya dianthicola 67-19 HGI48_RS17315 ribonuclease R cofit 26 99
  Dickeya dianthicola ME23 DZA65_RS18405 ribonuclease R insig. 26 99
  Klebsiella michiganensis M5al BWI76_RS02575 exoribonuclease R sig. 26 95
  Pseudomonas putida KT2440 PP_4880 exoribonuclease R strong 26 80
  Escherichia coli Nissle 1917 ECOLIN_RS24265 ribonuclease R sig. 26 95
  Kangiella aquimarina DSM 16071 B158DRAFT_1989 ribonuclease R cofit 25 92