Homologs of CSW01_05785 from Vibrio cholerae E7946 ATCC 55056

23S rRNA pseudouridine synthase E
SEED: Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase E

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_05785 23S rRNA pseudouridine synthase E insig. 100 100
o Serratia liquefaciens MT49 IAI46_10455 23S rRNA pseudouridine(2457) synthase RluE insig. 67 82
o Rahnella sp. WP5 EX31_RS24585 23S rRNA pseudouridine(2457) synthase RluE insig. 63 86
  Shewanella sp. ANA-3 Shewana3_1749 ribosomal large subunit pseudouridine synthase E (RefSeq) insig. 69 75
  Escherichia coli ECOR27 NOLOHH_20890 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 71 73
  Escherichia coli ECRC62 BNILDI_19055 rluE 23S rRNA pseudouridine(2457) synthase RluE cofit 71 73
  Escherichia coli BW25113 b1135 ymfC orf, hypothetical protein (VIMSS) sig. 71 73
o Shewanella loihica PV-4 Shew_1562 pseudouridylate synthase (RefSeq) insig. 69 71
o Escherichia coli ECOR38 HEPCGN_24230 rluE 23S rRNA pseudouridine(2457) synthase RluE cofit 71 73
  Escherichia coli ECRC100 OKFHMN_00755 rluE 23S rRNA pseudouridine(2457) synthase RluE cofit 71 73
  Escherichia coli ECRC101 MCAODC_22330 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 71 73
  Escherichia coli ECRC102 NIAGMN_24900 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 71 73
  Escherichia coli ECRC98 JDDGAC_06610 rluE 23S rRNA pseudouridine(2457) synthase RluE cofit 71 73
  Escherichia coli ECRC99 KEDOAH_24840 rluE 23S rRNA pseudouridine(2457) synthase RluE no data 71 73
  Enterobacter sp. TBS_079 MPMX20_01819 Ribosomal large subunit pseudouridine synthase E insig. 68 77
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02533 Ribosomal large subunit pseudouridine synthase E insig. 71 73
  Escherichia coli BL21 ECD_01133 23S rRNA pseudouridine(2457) synthase insig. 70 73
o Escherichia fergusonii Becca EFB2_02840 Ribosomal large subunit pseudouridine synthase E insig. 69 73
  Enterobacter asburiae PDN3 EX28DRAFT_1795 pseudouridine synthase insig. 67 77
  Pantoea sp. MT58 IAI47_11905 23S rRNA pseudouridine(2457) synthase RluE insig. 67 77
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3421 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 57 95
  Azospirillum brasilense Sp245 AZOBR_RS03795 Pseudouridine synthase insig. 70 73
  Azospirillum sp. SherDot2 MPMX19_00077 Ribosomal large subunit pseudouridine synthase E insig. 69 73
o Dickeya dianthicola ME23 DZA65_RS11855 23S rRNA pseudouridine(2457) synthase RluE insig. 60 84
  Klebsiella michiganensis M5al BWI76_RS11325 23S rRNA pseudouridine synthase E no data 69 73
  Dickeya dadantii 3937 DDA3937_RS11475 23S rRNA pseudouridine(2457) synthase RluE insig. 67 72
o Dickeya dianthicola 67-19 HGI48_RS11520 23S rRNA pseudouridine(2457) synthase RluE insig. 59 84
  Shewanella amazonensis SB2B Sama_2060 pseudouridylate synthase (RefSeq) insig. 64 76
o Pseudomonas putida KT2440 PP_4778 23S rRNA pseudouridine 2457 synthase insig. 59 86
o Pseudomonas fluorescens FW300-N2E3 AO353_06330 pseudouridine synthase insig. 61 79
o Erwinia tracheiphila SCR3 LU632_RS14565 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 61 84
o Pectobacterium carotovorum WPP14 HER17_RS11615 23S rRNA pseudouridine(2457) synthase RluE insig. 60 85
  Pseudomonas stutzeri RCH2 Psest_0568 pseudouridine synthase insig. 64 74
  Alteromonas macleodii MIT1002 MIT1002_01829 Ribosomal large subunit pseudouridine synthase E insig. 66 71
o Pseudomonas sp. RS175 PFR28_03839 Ribosomal large subunit pseudouridine synthase E insig. 60 82
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5028 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 64 74
  Pseudomonas syringae pv. syringae B728a Psyr_4336 ribosomal large subunit pseudouridine synthase E insig. 63 75
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4336 ribosomal large subunit pseudouridine synthase E insig. 63 75
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1389 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 63 74
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2722 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 63 74
  Magnetospirillum magneticum AMB-1 AMB_RS12420 pseudouridine synthase cofit 65 73
  Pseudomonas fluorescens SBW25 PFLU_RS26510 pseudouridine synthase insig. 63 74
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26510 pseudouridine synthase insig. 63 74
o Pseudomonas fluorescens FW300-N2C3 AO356_15455 pseudouridine synthase insig. 63 74
  Castellaniella sp019104865 MT123 ABCV34_RS13900 pseudouridine synthase insig. 63 74
  Pseudomonas simiae WCS417 PS417_24580 pseudouridine synthase sig. 64 74
  Pseudomonas sp. S08-1 OH686_08840 LSU rRNA pseudouridine(2457) synthase insig. 61 74
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1070 pseudouridine synthase insig. 60 73
  Rhodospirillum rubrum S1H Rru_A1939 Pseudouridine synthase, Rsu (NCBI) insig. 60 73
  Lysobacter sp. OAE881 ABIE51_RS00615 pseudouridine synthase insig. 61 72
  Rhodanobacter denitrificans MT42 LRK55_RS09590 pseudouridine synthase insig. 64 71
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09950 pseudouridine synthase insig. 64 71
  Kangiella aquimarina DSM 16071 B158DRAFT_1837 ribosomal large subunit pseudouridine synthase E (EC 5.4.99.-) insig. 60 71
  Dechlorosoma suillum PS Dsui_3293 pseudouridine synthase family protein insig. 59 72
  Dinoroseobacter shibae DFL-12 Dshi_2908 pseudouridine synthase (RefSeq) insig. 58 72
  Phaeobacter inhibens DSM 17395 PGA1_c16410 ribosomal large subunit pseudouridine synthase E insig. 57 73
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.351.1 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 59 71
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02130 pseudouridine synthase sig. 57 73
  Acidovorax sp. GW101-3H11 Ac3H11_10 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 57 76
  Rhodanobacter sp. FW510-T8 OKGIIK_16200 Pseudouridine synthase insig. 63 72
  Variovorax sp. SCN45 GFF6670 LSU rRNA pseudouridine(2457) synthase (EC 5.4.99.20) insig. 58 73
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13170 pseudouridine synthase insig. 57 72
  Cupriavidus basilensis FW507-4G11 RR42_RS17140 pseudouridine synthase insig. 58 72
  Synechococcus elongatus PCC 7942 Synpcc7942_1514 Pseudouridine synthase, Rsu sig. 54 73
  Paraburkholderia sabiae LMG 24235 QEN71_RS02975 pseudouridine synthase insig. 53 73
  Marinobacter adhaerens HP15 HP15_2084 RNA pseudouridylate synthase insig. 62 61
  Paraburkholderia graminis OAS925 ABIE53_003318 23S rRNA pseudouridine2457 synthase insig. 53 71
  Burkholderia phytofirmans PsJN BPHYT_RS15735 pseudouridine synthase insig. 52 73
  Acinetobacter radioresistens SK82 MPMX26_01011 hypothetical protein insig. 55 73
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04086 23S rRNA pseudouridine2457 synthase insig. 53 71
  Herbaspirillum seropedicae SmR1 HSERO_RS07010 pseudouridine synthase insig. 53 72
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1556 pseudouridine synthase insig. 47 73
  Fusobacterium nucleatum SB010 HUW76_04625 rRNA pseudouridine synthase cofit 38 74
  Synechococcus elongatus PCC 7942 Synpcc7942_1010 ribosomal large subunit pseudouridine synthase B strong 41 76
  Shewanella loihica PV-4 Shew_0814 pseudouridine synthase (RefSeq) insig. 42 71
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08410 pseudouridine synthase insig. 38 79
  Mycobacterium tuberculosis H37Rv Rv1711 Conserved hypothetical protein no data 39 70
  Dinoroseobacter shibae DFL-12 Dshi_2790 RNA-binding S4 domain protein (RefSeq) insig. 38 71
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00665 rRNA pseudouridine synthase insig. 37 76
  Rhodanobacter denitrificans MT42 LRK55_RS00435 pseudouridine synthase insig. 36 76
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08260 pseudouridine synthase insig. 40 72
  Rhodospirillum rubrum S1H Rru_A0652 Pseudouridine synthase, Rsu (NCBI) cofit 36 71
  Phaeobacter inhibens DSM 17395 PGA1_c22020 putative ribosomal large subunit pseudouridine synthase B insig. 35 71
  Rhodanobacter sp. FW510-T8 OKGIIK_06590 Pseudouridine synthase insig. 33 87
  Sinorhizobium meliloti 1021 SM_b20024 ribosomal large subunit pseudouridine synthase B insig. 36 76
  Magnetospirillum magneticum AMB-1 AMB_RS20865 rRNA pseudouridine synthase cofit 35 76
  Lysobacter sp. OAE881 ABIE51_RS06125 pseudouridine synthase insig. 34 82
  Desulfovibrio vulgaris Miyazaki F DvMF_0369 pseudouridine synthase (RefSeq) sig. 37 75
  Variovorax sp. SCN45 GFF7619 LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) no data 42 61
  Bifidobacterium breve UCC2003 BBR_RS15700 rRNA pseudouridine synthase no data 35 70
  Phocaeicola dorei CL03T12C01 ABI39_RS08040 pseudouridine synthase no data 31 76
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00420 pseudouridine synthase no data 31 76
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07850 pseudouridine synthase insig. 39 58
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0719 pseudouridine synthase no data 30 78
  Paraburkholderia sabiae LMG 24235 QEN71_RS23115 pseudouridine synthase no data 35 76
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4091.1 Pseudouridylate synthase insig. 35 75
  Alteromonas macleodii MIT1002 MIT1002_01435 Ribosomal large subunit pseudouridine synthase B cofit 35 73
  Pseudomonas putida KT2440 PP_4496 23S rRNA pseudouridine 2605 synthase no data 35 80
  Dickeya dianthicola 67-19 HGI48_RS10500 23S rRNA pseudouridine(2605) synthase RluB sig. 34 73
  Dickeya dianthicola ME23 DZA65_RS10980 23S rRNA pseudouridine(2605) synthase RluB sig. 34 73