Homologs of CSW01_03000 from Vibrio cholerae E7946 ATCC 55056

ribosome maturation factor RimM
SEED: 16S rRNA processing protein RimM
KEGG: 16S rRNA processing protein RimM

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_03000 ribosome maturation factor RimM no data 100 100
o Escherichia coli BL21 ECD_02497 ribosome maturation factor no data 60 99
o Escherichia fergusonii Becca EFB2_01284 Ribosome maturation factor RimM no data 60 99
o Escherichia coli ECOR27 NOLOHH_12855 rimM ribosome maturation factor RimM no data 60 99
o Escherichia coli ECOR38 HEPCGN_20300 rimM ribosome maturation factor RimM no data 60 99
o Escherichia coli ECRC100 OKFHMN_21180 rimM ribosome maturation factor RimM no data 60 99
o Escherichia coli ECRC101 MCAODC_11710 rimM ribosome maturation factor RimM no data 60 99
o Escherichia coli ECRC102 NIAGMN_18950 rimM ribosome maturation factor RimM no data 60 99
o Escherichia coli ECRC62 BNILDI_11660 rimM ribosome maturation factor RimM no data 60 99
o Escherichia coli ECRC98 JDDGAC_24845 rimM ribosome maturation factor RimM no data 60 99
o Escherichia coli ECRC99 KEDOAH_07040 rimM ribosome maturation factor RimM no data 60 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01098 Ribosome maturation factor RimM no data 60 99
o Escherichia coli Nissle 1917 ECOLIN_RS14740 ribosome maturation factor RimM no data 60 99
o Escherichia coli BW25113 b2608 yfjA orf, hypothetical protein (VIMSS) no data 60 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4171 16S rRNA processing protein RimM no data 61 96
o Rahnella sp. WP5 EX31_RS07720 ribosome maturation factor RimM no data 60 96
o Klebsiella michiganensis M5al BWI76_RS21520 ribosome maturation factor RimM no data 60 99
o Klebsiella pneumoniae MKP103 KDGMDA_02215 ribosome maturation factor RimM no data 59 99
o Klebsiella pneumoniae MRSN742743 KFA93_RS24650 rimM;go_component=ribosome|0005840||IEA;go_function=ribosome ribosome maturation factor RimM no data 59 99
o Erwinia amylovora T8 OLJFJH_09660 ribosome maturation factor RimM no data 59 99
o Enterobacter asburiae PDN3 EX28DRAFT_2711 16S rRNA processing protein RimM no data 61 93
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_01525 rimM ribosome maturation factor RimM no data 59 99
o Pectobacterium carotovorum WPP14 HER17_RS05120 ribosome maturation factor RimM no data 62 92
o Serratia liquefaciens MT49 IAI46_03925 ribosome maturation factor RimM no data 60 100
o Enterobacter sp. TBS_079 MPMX20_03478 Ribosome maturation factor RimM no data 60 93
o Erwinia tracheiphila SCR3 LU632_RS15660 rimM ribosome maturation factor RimM no data 58 99
o Dickeya dadantii 3937 DDA3937_RS16170 ribosome maturation factor RimM no data 61 92
o Dickeya dianthicola ME23 DZA65_RS17375 ribosome maturation factor RimM no data 61 92
o Dickeya dianthicola 67-19 HGI48_RS16280 ribosome maturation factor RimM no data 61 92
o Pantoea sp. MT58 IAI47_04380 ribosome maturation factor RimM no data 59 92
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16585 ribosome maturation factor RimM no data 59 92
o Shewanella amazonensis SB2B Sama_0890 rimM 16S rRNA-processing protein RimM (RefSeq) no data 54 96
o Shewanella sp. ANA-3 Shewana3_3016 rimM 16S rRNA-processing protein RimM (RefSeq) no data 55 96
o Shewanella oneidensis MR-1 SO1358 rimM 16S rRNA processing protein RimM (NCBI ptt file) no data 54 96
o Shewanella loihica PV-4 Shew_1064 rimM 16S rRNA-processing protein (RefSeq) no data 55 96
o Alteromonas macleodii MIT1002 MIT1002_01309 hypothetical protein no data 52 96
o Kangiella aquimarina DSM 16071 B158DRAFT_2262 16S rRNA processing protein RimM no data 43 94
o Marinobacter adhaerens HP15 HP15_759 16S rRNA-processing protein RimM no data 43 91
o Pseudomonas putida KT2440 PP_1463 Ribosome maturation factor RimM no data 39 96
o Pseudomonas aeruginosa PA14 IKLFDK_19115 ribosome maturation factor RimM no data 39 97
o Pseudomonas aeruginosa MRSN321 DY961_RS14250 rimM;go_function=RNA ribosome maturation factor RimM no data 39 95
o Pseudomonas aeruginosa PUPa3 DQ20_RS42875 rimM;go_function=RNA ribosome maturation factor RimM no data 39 95
o Pseudomonas sp. S08-1 OH686_17730 16S rRNA processing protein RimM no data 39 92
o Pseudomonas sp. BP01 JOY50_RS11680 rimM ribosome maturation factor RimM no data 39 96
o Pseudomonas sp. SVBP6 COO64_RS04885 rimM ribosome maturation factor RimM no data 38 96
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1717 16S rRNA processing protein RimM no data 38 96
o Rhodanobacter sp. FW510-T8 OKGIIK_09560 rimM ribosome maturation factor RimM no data 39 96
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02505 ribosome maturation factor RimM no data 38 96
o Pseudomonas sp. DMC3 GFF1983 Ribosome maturation factor RimM no data 38 96
o Pseudomonas segetis P6 ACVTMO_RS07770 rimM ribosome maturation factor RimM no data 38 96
o Pseudomonas fluorescens FW300-N2C3 AO356_06400 16S rRNA processing protein RimM no data 38 96
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3148 16S rRNA processing protein RimM no data 38 96
o Pseudomonas fluorescens FW300-N2E3 AO353_04380 16S rRNA processing protein RimM no data 39 96
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS07440 ribosome maturation factor RimM no data 37 96
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04732 Ribosome maturation factor RimM no data 37 96
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_872 16S rRNA processing protein RimM no data 37 96
o Pseudomonas sp. RS175 PFR28_00328 Ribosome maturation factor RimM no data 37 96
o Methylophilus sp. DMC18 GFF2338 Ribosome maturation factor RimM no data 40 92
o Acinetobacter baumannii LAC-4 RR41_RS01715 ribosome maturation factor RimM no data 39 94
o Pseudomonas syringae pv. syringae B728a Psyr_1283 16S rRNA processing protein RimM no data 38 96
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1283 16S rRNA processing protein RimM no data 38 96
o Pseudomonas fluorescens SBW25 PFLU_RS24575 ribosome maturation factor RimM no data 36 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24575 ribosome maturation factor RimM no data 36 96
o Pseudomonas orientalis W4I3 QF045_RS25105 ribosome maturation factor RimM no data 36 96
o Acinetobacter radioresistens SK82 MPMX26_02784 Ribosome maturation factor RimM no data 39 96
o Pseudomonas simiae WCS417 PS417_22915 16S rRNA processing protein RimM no data 36 96
o Rhodanobacter denitrificans MT42 LRK55_RS02260 ribosome maturation factor RimM no data 38 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS08820 ribosome maturation factor RimM no data 38 96
o Pseudomonas stutzeri RCH2 Psest_3132 16S rRNA processing protein RimM no data 36 96
o Lysobacter sp. OAE881 ABIE51_RS07745 ribosome maturation factor RimM no data 34 100
o Dechlorosoma suillum PS Dsui_3514 16S rRNA processing protein RimM no data 34 95
o Acidovorax sp. GW101-3H11 Ac3H11_1685 16S rRNA processing protein RimM no data 38 91
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3767.1 16S rRNA processing protein RimM no data 34 96
o Herbaspirillum seropedicae SmR1 HSERO_RS07580 ribosome maturation factor RimM no data 29 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5739 16S rRNA processing protein RimM no data 30 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04293 16S rRNA processing protein RimM no data 32 98
  Burkholderia phytofirmans PsJN BPHYT_RS14760 ribosome maturation factor RimM no data 33 89
  Paraburkholderia graminis OAS925 ABIE53_003127 16S rRNA processing protein RimM no data 31 98
  Variovorax sp. SCN45 GFF3950 16S rRNA processing protein RimM no data 29 97
  Variovorax sp. OAS795 ABID97_RS08745 ribosome maturation factor RimM no data 27 99
  Cupriavidus basilensis FW507-4G11 RR42_RS04625 16S rRNA processing protein RimM no data 30 89
  Xanthobacter sp. DMC5 GFF1912 Ribosome maturation factor RimM no data 29 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS04215 ribosome maturation factor RimM no data 29 93
  Ralstonia sp. UNC404CL21Col ABZR87_RS09605 ribosome maturation factor RimM no data 31 89
  Azospirillum sp. SherDot2 MPMX19_00324 Ribosome maturation factor RimM no data 30 97
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS13910 ribosome maturation factor RimM no data 31 89
  Ralstonia solanacearum UW163 UW163_RS15900 ribosome maturation factor RimM no data 31 89
  Phaeobacter inhibens DSM 17395 PGA1_c00540 putative 16S rRNA-processing protein RimM no data 29 91
  Rhodospirillum rubrum S1H Rru_A1186 16S rRNA processing protein RimM (NCBI) no data 34 91
  Ralstonia solanacearum PSI07 RPSI07_RS19560 ribosome maturation factor RimM no data 32 89
  Ralstonia solanacearum GMI1000 RS_RS04645 ribosome maturation factor RimM no data 31 89
  Azospirillum brasilense Sp245 AZOBR_RS03520 16S rRNA-processing protein RimM no data 28 93
  Rhizobium sp. OAE497 ABIE40_RS18350 ribosome maturation factor RimM no data 29 93
  Rhodopseudomonas palustris CGA009 TX73_001260 ribosome maturation factor RimM insig. 26 89
  Dinoroseobacter shibae DFL-12 Dshi_0344 16S rRNA processing protein RimM (RefSeq) no data 30 91
  Bosea sp. OAE506 ABIE41_RS11745 ribosome maturation factor RimM no data 30 92
  Synechococcus elongatus PCC 7942 Synpcc7942_2259 rimM 16S rRNA-processing protein strong 30 92
  Castellaniella sp019104865 MT123 ABCV34_RS05580 ribosome maturation factor RimM no data 26 95
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_20585 16S rRNA processing protein RimM no data 25 90
  Caulobacter crescentus NA1000 CCNA_03766 16S rRNA processing protein RimM no data 25 76