Homologs of CSW01_00760 from Vibrio cholerae E7946 ATCC 55056

RNA polymerase sigma factor RpoH
SEED: RNA polymerase sigma factor RpoH
KEGG: RNA polymerase sigma-32 factor

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_00760 RNA polymerase sigma factor RpoH no data 100 100
o Dickeya dadantii 3937 DDA3937_RS00650 RNA polymerase sigma factor RpoH no data 74 99
o Dickeya dianthicola 67-19 HGI48_RS20740 RNA polymerase sigma factor RpoH no data 74 99
o Dickeya dianthicola ME23 DZA65_RS21750 RNA polymerase sigma factor RpoH no data 74 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18065 RNA polymerase sigma factor RpoH no data 72 99
o Pectobacterium carotovorum WPP14 HER17_RS00485 RNA polymerase sigma factor RpoH no data 72 99
o Pantoea sp. MT58 IAI47_01555 RNA polymerase sigma factor RpoH no data 72 99
o Erwinia amylovora T8 OLJFJH_04365 RNA polymerase sigma factor RpoH no data 71 99
o Rahnella sp. WP5 EX31_RS14815 RNA polymerase sigma factor RpoH no data 70 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_12815 rpoH RNA polymerase sigma factor RpoH no data 70 99
o Erwinia tracheiphila SCR3 LU632_RS19265 rpoH RNA polymerase sigma factor RpoH no data 70 99
o Escherichia coli BL21 ECD_03310 RNA polymerase, sigma 32 (sigma H) factor no data 71 99
o Escherichia fergusonii Becca EFB2_00355 RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli ECOR27 NOLOHH_08520 rpoH RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli ECOR38 HEPCGN_15545 rpoH RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli ECRC100 OKFHMN_16715 rpoH RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli ECRC101 MCAODC_07245 rpoH RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli ECRC102 NIAGMN_14485 rpoH RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli ECRC98 JDDGAC_20345 rpoH RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli ECRC99 KEDOAH_11425 rpoH RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00242 RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli Nissle 1917 ECOLIN_RS19795 RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli BW25113 b3461 rpoH RNA polymerase sigma factor (NCBI) no data 71 99
o Klebsiella pneumoniae MKP103 KDGMDA_07245 RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli ECRC62 BNILDI_02995 rpoH RNA polymerase sigma factor RpoH no data 71 99
o Klebsiella michiganensis M5al BWI76_RS26385 RNA polymerase sigma factor RpoH no data 71 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF544 RNA polymerase sigma factor RpoH no data 71 99
o Serratia liquefaciens MT49 IAI46_00940 RNA polymerase sigma factor RpoH no data 72 99
o Enterobacter sp. TBS_079 MPMX20_04338 RNA polymerase sigma factor RpoH no data 70 99
o Enterobacter asburiae PDN3 EX28DRAFT_4295 alternative sigma factor RpoH no data 70 99
o Shewanella sp. ANA-3 Shewana3_3969 RNA polymerase factor sigma-32 (RefSeq) no data 68 99
o Shewanella oneidensis MR-1 SO4583 rpoH RNA polymerase sigma-32 factor (NCBI ptt file) no data 68 99
o Shewanella amazonensis SB2B Sama_3465 RNA polymerase factor sigma-32 (RefSeq) no data 68 98
o Shewanella loihica PV-4 Shew_3603 RNA polymerase factor sigma-32 (RefSeq) no data 67 98
o Alteromonas macleodii MIT1002 MIT1002_03677 Heat shock regulatory protein F33.4 no data 62 99
o Pseudomonas syringae pv. syringae B728a Psyr_4748 RNA polymerase, sigma 32 subunit, RpoH no data 62 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4748 RNA polymerase, sigma 32 subunit, RpoH no data 62 99
o Marinobacter adhaerens HP15 HP15_3487 RNA polymerase, sigma 32 subunit, RpoH no data 64 97
o Pseudomonas sp. SVBP6 COO64_RS12925 rpoH RNA polymerase sigma factor RpoH no data 62 99
o Pseudomonas sp. RS175 PFR28_04256 RNA polymerase sigma factor RpoH no data 62 99
o Pseudomonas sp. BP01 JOY50_RS20840 rpoH RNA polymerase sigma factor RpoH no data 61 99
o Pseudomonas putida KT2440 PP_5108 RNA polymerase factor sigma-32 no data 61 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_996 RNA polymerase sigma factor RpoH no data 62 99
o Kangiella aquimarina DSM 16071 B158DRAFT_0438 alternative sigma factor RpoH no data 62 99
o Pseudomonas fluorescens FW300-N2C3 AO356_13355 RNA polymerase subunit sigma-70 no data 62 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4586 RNA polymerase sigma factor RpoH no data 62 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2327 RNA polymerase sigma factor RpoH no data 62 99
o Pseudomonas sp. DMC3 GFF223 RNA polymerase sigma factor RpoH no data 62 99
o Pseudomonas fluorescens FW300-N2E3 AO353_08235 RNA polymerase subunit sigma-70 no data 62 99
o Pseudomonas sp. S08-1 OH686_14255 alternative sigma factor RpoH no data 62 99
o Pseudomonas fluorescens SBW25 PFLU_RS28440 RNA polymerase sigma factor RpoH no data 61 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28440 RNA polymerase sigma factor RpoH no data 61 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05496 RNA polymerase sigma factor RpoH no data 61 99
o Pseudomonas orientalis W4I3 QF045_RS01195 RNA polymerase sigma factor RpoH no data 61 99
o Pseudomonas simiae WCS417 PS417_26795 RNA polymerase sigma 70 no data 61 99
o Pseudomonas aeruginosa MRSN321 DY961_RS21855 rpoH;go_function=sigma RNA polymerase sigma factor RpoH no data 64 98
o Pseudomonas aeruginosa PA14 IKLFDK_23545 RNA polymerase sigma factor RpoH no data 64 98
o Pseudomonas aeruginosa PUPa3 DQ20_RS37440 rpoH;go_function=sigma RNA polymerase sigma factor RpoH no data 64 98
o Acinetobacter baumannii LAC-4 RR41_RS06290 RNA polymerase sigma factor RpoH no data 61 99
o Pseudomonas stutzeri RCH2 Psest_0261 alternative sigma factor RpoH no data 62 99
o Acinetobacter radioresistens SK82 MPMX26_01110 RNA polymerase sigma factor RpoH no data 60 99
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS03735 RNA polymerase sigma factor RpoH no data 61 93
o Pseudomonas segetis P6 ACVTMO_RS21895 rpoH RNA polymerase sigma factor RpoH no data 61 99
o Rhodanobacter denitrificans MT42 LRK55_RS10650 RNA polymerase sigma factor RpoH no data 63 93
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10945 RNA polymerase sigma factor RpoH no data 63 93
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4771.1 RNA polymerase sigma factor RpoH no data 59 97
o Rhodanobacter sp. FW510-T8 OKGIIK_12925 rpoH RNA polymerase sigma factor RpoH no data 61 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS12575 RNA polymerase sigma factor RpoH no data 61 93
o Lysobacter sp. OAE881 ABIE51_RS02105 RNA polymerase sigma factor RpoH no data 55 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS11000 RNA polymerase sigma factor RpoH no data 54 99
o Ralstonia solanacearum GMI1000 RS_RS01840 RNA polymerase sigma factor RpoH no data 54 99
o Ralstonia solanacearum UW163 UW163_RS02580 RNA polymerase sigma factor RpoH no data 54 99
o Ralstonia solanacearum PSI07 RPSI07_RS22305 RNA polymerase sigma factor RpoH no data 54 99
o Dechlorosoma suillum PS Dsui_1121 alternative sigma factor RpoH no data 56 93
o Castellaniella sp019104865 MT123 ABCV34_RS13215 RNA polymerase sigma factor RpoH no data 55 95
o Ralstonia sp. UNC404CL21Col ABZR87_RS06855 RNA polymerase sigma factor RpoH sig. 54 99
o Cupriavidus basilensis FW507-4G11 RR42_RS01930 RNA polymerase factor sigma-32 no data 54 95
o Paraburkholderia graminis OAS925 ABIE53_000694 RNA polymerase sigma-32 factor no data 54 95
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01975 RNA polymerase, sigma 32 subunit, RpoH no data 54 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS01625 RNA polymerase sigma factor RpoH no data 53 95
o Burkholderia phytofirmans PsJN BPHYT_RS02775 RNA polymerase sigma 70 no data 53 95
o Herbaspirillum seropedicae SmR1 HSERO_RS20735 RNA polymerase sigma 70 no data 53 96
o Methylophilus sp. DMC18 GFF1926 RNA polymerase sigma factor RpoH no data 56 88
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF784 RNA polymerase sigma factor RpoH no data 49 99
o Acidovorax sp. GW101-3H11 Ac3H11_3880 RNA polymerase sigma factor RpoH no data 49 99
o Variovorax sp. OAS795 ABID97_RS23900 RNA polymerase sigma factor RpoH no data 49 99
o Variovorax sp. SCN45 GFF2310 RNA polymerase sigma factor RpoH no data 48 99
o Rhodospirillum rubrum S1H Rru_A1110 Sigma 32 (RpoH) (NCBI) sig. 42 98
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0665 alternative sigma factor RpoH no data 43 96
o Azospirillum brasilense Sp245 AZOBR_RS21830 RNA polymerase sigma 70 insig. 44 95
  Rhodospirillum rubrum S1H Rru_A1021 Sigma 32 (RpoH) (NCBI) strong 43 99
o Phaeobacter inhibens DSM 17395 PGA1_c09010 RNA polymerase sigma-32 factor RpoH no data 41 100
o Bosea sp. OAE506 ABIE41_RS05630 RNA polymerase sigma factor RpoH sig. 43 99
o Xanthobacter sp. DMC5 GFF2509 RNA polymerase sigma factor RpoH no data 42 95
o Caulobacter crescentus NA1000 CCNA_03195 RNA polymerase sigma factor RpoH no data 41 97
o Caulobacter crescentus NA1000 Δfur CCNA_03195 RNA polymerase sigma factor RpoH no data 41 97
o Magnetospirillum magneticum AMB-1 AMB_RS16100 RNA polymerase sigma factor RpoH strong 40 99
  Azospirillum brasilense Sp245 AZOBR_RS10665 RNA polymerase sigma 70 strong 41 96
o Azospirillum sp. SherDot2 MPMX19_05595 RNA polymerase sigma factor RpoH insig. 42 94
o Rhizobium sp. OAE497 ABIE40_RS14795 RNA polymerase sigma factor RpoH no data 41 99