Homologs of CSW01_00760 from Vibrio cholerae E7946 ATCC 55056

RNA polymerase sigma factor RpoH
SEED: RNA polymerase sigma factor RpoH
KEGG: RNA polymerase sigma-32 factor

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_00760 RNA polymerase sigma factor RpoH no data 100 100
o Dickeya dadantii 3937 DDA3937_RS00650 RNA polymerase sigma factor RpoH no data 74 99
o Dickeya dianthicola 67-19 HGI48_RS20740 RNA polymerase sigma factor RpoH no data 74 99
o Dickeya dianthicola ME23 DZA65_RS21750 RNA polymerase sigma factor RpoH no data 74 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18065 RNA polymerase sigma factor RpoH no data 72 99
o Pectobacterium carotovorum WPP14 HER17_RS00485 RNA polymerase sigma factor RpoH no data 72 99
o Pantoea sp. MT58 IAI47_01555 RNA polymerase sigma factor RpoH no data 72 99
o Erwinia amylovora T8 OLJFJH_04365 RNA polymerase sigma factor RpoH no data 71 99
o Rahnella sp. WP5 EX31_RS14815 RNA polymerase sigma factor RpoH no data 70 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_12815 rpoH RNA polymerase sigma factor RpoH no data 70 99
o Erwinia tracheiphila SCR3 LU632_RS19265 rpoH RNA polymerase sigma factor RpoH no data 70 99
o Escherichia coli BL21 ECD_03310 RNA polymerase, sigma 32 (sigma H) factor no data 71 99
o Escherichia fergusonii Becca EFB2_00355 RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli ECOR27 NOLOHH_08520 rpoH RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli ECOR38 HEPCGN_15545 rpoH RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli ECRC100 OKFHMN_16715 rpoH RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli ECRC101 MCAODC_07245 rpoH RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli ECRC102 NIAGMN_14485 rpoH RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli ECRC98 JDDGAC_20345 rpoH RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli ECRC99 KEDOAH_11425 rpoH RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00242 RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli Nissle 1917 ECOLIN_RS19795 RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli BW25113 b3461 rpoH RNA polymerase sigma factor (NCBI) no data 71 99
o Klebsiella pneumoniae MKP103 KDGMDA_07245 RNA polymerase sigma factor RpoH no data 71 99
o Klebsiella pneumoniae MRSN742743 KFA93_RS09900 rpoH;go_function=DNA-binding RNA polymerase sigma factor RpoH no data 71 99
o Escherichia coli ECRC62 BNILDI_02995 rpoH RNA polymerase sigma factor RpoH no data 71 99
o Klebsiella michiganensis M5al BWI76_RS26385 RNA polymerase sigma factor RpoH no data 71 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF544 RNA polymerase sigma factor RpoH no data 71 99
o Serratia liquefaciens MT49 IAI46_00940 RNA polymerase sigma factor RpoH no data 72 99
o Enterobacter sp. TBS_079 MPMX20_04338 RNA polymerase sigma factor RpoH no data 70 99
o Enterobacter asburiae PDN3 EX28DRAFT_4295 alternative sigma factor RpoH no data 70 99
o Shewanella sp. ANA-3 Shewana3_3969 RNA polymerase factor sigma-32 (RefSeq) no data 68 99
o Shewanella oneidensis MR-1 SO4583 rpoH RNA polymerase sigma-32 factor (NCBI ptt file) no data 68 99
o Shewanella amazonensis SB2B Sama_3465 RNA polymerase factor sigma-32 (RefSeq) no data 68 98
o Shewanella loihica PV-4 Shew_3603 RNA polymerase factor sigma-32 (RefSeq) no data 67 98
o Alteromonas macleodii MIT1002 MIT1002_03677 Heat shock regulatory protein F33.4 no data 62 99
o Pseudomonas syringae pv. syringae B728a Psyr_4748 RNA polymerase, sigma 32 subunit, RpoH no data 62 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4748 RNA polymerase, sigma 32 subunit, RpoH no data 62 99
o Marinobacter adhaerens HP15 HP15_3487 RNA polymerase, sigma 32 subunit, RpoH no data 64 97
o Pseudomonas sp. SVBP6 COO64_RS12925 rpoH RNA polymerase sigma factor RpoH no data 62 99
o Pseudomonas sp. RS175 PFR28_04256 RNA polymerase sigma factor RpoH no data 62 99
o Pseudomonas sp. BP01 JOY50_RS20840 rpoH RNA polymerase sigma factor RpoH no data 61 99
o Pseudomonas putida KT2440 PP_5108 RNA polymerase factor sigma-32 no data 61 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_996 RNA polymerase sigma factor RpoH no data 62 99
o Kangiella aquimarina DSM 16071 B158DRAFT_0438 alternative sigma factor RpoH no data 62 99
o Pseudomonas fluorescens FW300-N2C3 AO356_13355 RNA polymerase subunit sigma-70 no data 62 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4586 RNA polymerase sigma factor RpoH no data 62 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2327 RNA polymerase sigma factor RpoH no data 62 99
o Pseudomonas fluorescens FW300-N2E3 AO353_08235 RNA polymerase subunit sigma-70 no data 62 99
o Pseudomonas sp. DMC3 GFF223 RNA polymerase sigma factor RpoH no data 62 99
o Pseudomonas sp. S08-1 OH686_14255 alternative sigma factor RpoH no data 62 99
o Pseudomonas fluorescens SBW25 PFLU_RS28440 RNA polymerase sigma factor RpoH no data 61 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28440 RNA polymerase sigma factor RpoH no data 61 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05496 RNA polymerase sigma factor RpoH no data 61 99
o Pseudomonas orientalis W4I3 QF045_RS01195 RNA polymerase sigma factor RpoH no data 61 99
o Pseudomonas simiae WCS417 PS417_26795 RNA polymerase sigma 70 no data 61 99
o Pseudomonas aeruginosa MRSN321 DY961_RS21855 rpoH;go_function=sigma RNA polymerase sigma factor RpoH no data 64 98
o Pseudomonas aeruginosa PA14 IKLFDK_23545 RNA polymerase sigma factor RpoH no data 64 98
o Pseudomonas aeruginosa PUPa3 DQ20_RS37440 rpoH;go_function=sigma RNA polymerase sigma factor RpoH no data 64 98
o Acinetobacter baumannii LAC-4 RR41_RS06290 RNA polymerase sigma factor RpoH no data 61 99
o Pseudomonas stutzeri RCH2 Psest_0261 alternative sigma factor RpoH no data 62 99
o Acinetobacter radioresistens SK82 MPMX26_01110 RNA polymerase sigma factor RpoH no data 60 99
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS03735 RNA polymerase sigma factor RpoH no data 61 93
o Pseudomonas segetis P6 ACVTMO_RS21895 rpoH RNA polymerase sigma factor RpoH no data 61 99
o Rhodanobacter denitrificans MT42 LRK55_RS10650 RNA polymerase sigma factor RpoH no data 63 93
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10945 RNA polymerase sigma factor RpoH no data 63 93
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4771.1 RNA polymerase sigma factor RpoH no data 59 97
o Rhodanobacter sp. FW510-T8 OKGIIK_12925 rpoH RNA polymerase sigma factor RpoH no data 61 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS12575 RNA polymerase sigma factor RpoH no data 61 93
o Lysobacter sp. OAE881 ABIE51_RS02105 RNA polymerase sigma factor RpoH no data 55 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS11000 RNA polymerase sigma factor RpoH no data 54 99
o Ralstonia solanacearum GMI1000 RS_RS01840 RNA polymerase sigma factor RpoH no data 54 99
o Ralstonia solanacearum UW163 UW163_RS02580 RNA polymerase sigma factor RpoH no data 54 99
o Ralstonia solanacearum PSI07 RPSI07_RS22305 RNA polymerase sigma factor RpoH no data 54 99
o Dechlorosoma suillum PS Dsui_1121 alternative sigma factor RpoH no data 56 93
o Castellaniella sp019104865 MT123 ABCV34_RS13215 RNA polymerase sigma factor RpoH no data 55 95
o Ralstonia sp. UNC404CL21Col ABZR87_RS06855 RNA polymerase sigma factor RpoH sig. 54 99
o Cupriavidus basilensis FW507-4G11 RR42_RS01930 RNA polymerase factor sigma-32 no data 54 95
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01975 RNA polymerase, sigma 32 subunit, RpoH no data 54 95
o Paraburkholderia graminis OAS925 ABIE53_000694 RNA polymerase sigma-32 factor no data 54 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS01625 RNA polymerase sigma factor RpoH no data 53 95
o Burkholderia phytofirmans PsJN BPHYT_RS02775 RNA polymerase sigma 70 no data 53 95
o Herbaspirillum seropedicae SmR1 HSERO_RS20735 RNA polymerase sigma 70 no data 53 96
o Methylophilus sp. DMC18 GFF1926 RNA polymerase sigma factor RpoH no data 56 88
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF784 RNA polymerase sigma factor RpoH no data 49 99
o Acidovorax sp. GW101-3H11 Ac3H11_3880 RNA polymerase sigma factor RpoH no data 49 99
o Variovorax sp. OAS795 ABID97_RS23900 RNA polymerase sigma factor RpoH no data 49 99
o Variovorax sp. SCN45 GFF2310 RNA polymerase sigma factor RpoH no data 48 99
o Rhodospirillum rubrum S1H Rru_A1110 Sigma 32 (RpoH) (NCBI) sig. 42 98
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0665 alternative sigma factor RpoH no data 43 96
o Azospirillum brasilense Sp245 AZOBR_RS21830 RNA polymerase sigma 70 insig. 44 95
  Rhodospirillum rubrum S1H Rru_A1021 Sigma 32 (RpoH) (NCBI) strong 43 99
o Phaeobacter inhibens DSM 17395 PGA1_c09010 RNA polymerase sigma-32 factor RpoH no data 41 100
o Bosea sp. OAE506 ABIE41_RS05630 RNA polymerase sigma factor RpoH sig. 43 99
o Xanthobacter sp. DMC5 GFF2509 RNA polymerase sigma factor RpoH no data 42 95
o Caulobacter crescentus NA1000 CCNA_03195 RNA polymerase sigma factor RpoH no data 41 97
o Caulobacter crescentus NA1000 Δfur CCNA_03195 RNA polymerase sigma factor RpoH no data 41 97
o Magnetospirillum magneticum AMB-1 AMB_RS16100 RNA polymerase sigma factor RpoH strong 40 99
  Azospirillum brasilense Sp245 AZOBR_RS10665 RNA polymerase sigma 70 strong 41 96
o Azospirillum sp. SherDot2 MPMX19_05595 RNA polymerase sigma factor RpoH insig. 42 94
o Rhizobium sp. OAE497 ABIE40_RS14795 RNA polymerase sigma factor RpoH no data 41 99
  Azospirillum sp. SherDot2 MPMX19_01046 RNA polymerase sigma factor RpoH insig. 42 94
  Magnetospirillum magneticum AMB-1 AMB_RS14115 RNA polymerase sigma factor RpoH no data 42 96
o Rhodopseudomonas palustris CGA009 TX73_001900 RNA polymerase sigma factor RpoH no data 42 96
o Sphingobium sp. HT1-2 GFF4061 RNA polymerase sigma factor RpoH no data 40 96
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10065 RNA polymerase sigma factor RpoH no data 40 96
o Dinoroseobacter shibae DFL-12 Dshi_2609 RNA polymerase, sigma 32 subunit, RpoH (RefSeq) strong 42 95
o Agrobacterium fabrum C58 Atu2445 RNA polymerase sigma-32 factor no data 40 99
  Azospirillum brasilense Sp245 AZOBR_RS08905 RNA polymerase sigma 70 sig. 40 94
  Azospirillum sp. SherDot2 MPMX19_03673 RNA polymerase sigma factor RpoH insig. 40 98
  Azospirillum sp. SherDot2 MPMX19_05441 RNA polymerase sigma factor RpoH no data 38 96
  Azospirillum brasilense Sp245 AZOBR_RS21510 RNA polymerase sigma 70 insig. 40 95
o Sinorhizobium meliloti 1021 SMc00646 RNA polymerase factor sigma-32 no data 37 99
  Sinorhizobium meliloti 1021 SMc03873 RNA polymerase factor sigma-32 insig. 39 90
  Desulfovibrio vulgaris Hildenborough JW710 DVU1584 rpoH sigma 70 family protein (TIGR) no data 36 95
  Desulfovibrio vulgaris Miyazaki F DvMF_0477 putative RNA polymerase, sigma 70 family subunit (RefSeq) no data 35 94
  Rhizobium sp. OAE497 ABIE40_RS18645 RNA polymerase factor sigma-32 insig. 36 92
  Azospirillum brasilense Sp245 AZOBR_RS00930 RNA polymerase sigma 70 insig. 37 93
  Azospirillum sp. SherDot2 MPMX19_02324 RNA polymerase sigma factor RpoH insig. 37 93
  Dinoroseobacter shibae DFL-12 Dshi_2978 RNA polymerase, sigma 32 subunit, RpoH (RefSeq) strong 36 89
  Phaeobacter inhibens DSM 17395 PGA1_c26660 RNA polymerase sigma-32 factor RpoH insig. 33 90
  Variovorax sp. SCN45 GFF7662 RNA polymerase sigma factor RpoH no data 60 38
  Fusobacterium nucleatum SB010 HUW76_03650 RNA polymerase sigma factor RpoD no data 33 92
  Cellulophaga baltica 18 M666_RS16995 RNA polymerase sigma factor RpoD/SigA strong 29 93
  Cellulophaga baltica 18 M666_RS08520 sigma-70 family RNA polymerase sigma factor no data 32 93
  Cupriavidus basilensis FW507-4G11 RR42_RS13185 RNA polymerase sigma factor RpoS strong 29 94
  Cellulophaga baltica 18 M666_RS16155 RNA polymerase sigma factor RpoD/SigA insig. 30 93
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_04885 RNA polymerase subunit sigma no data 32 93
  Phocaeicola dorei CL03T12C01 ABI39_RS13985 RNA polymerase sigma factor RpoD/SigA no data 30 93
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17770 RNA polymerase sigma factor RpoD/SigA no data 30 93
  Bacteroides ovatus ATCC 8483 BACOVA_00615 Sigma-70 region 2 no data 30 94
  Bacteroides stercoris CC31F HMPREF1181_RS10780 RNA polymerase sigma factor RpoD/SigA no data 30 94
  Bacteroides thetaiotaomicron VPI-5482 BT1311 RNA polymerase sigma factor rpoD (Sigma-A) (NCBI ptt file) no data 30 94
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3437 RNA polymerase sigma factor, sigma-70 family no data 30 93
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15235 RNA polymerase sigma factor RpoS strong 29 95
  Ralstonia solanacearum GMI1000 RS_RS06045 RNA polymerase sigma factor RpoS strong 29 95
  Ralstonia solanacearum UW163 UW163_RS12700 RNA polymerase sigma factor RpoS sig. 29 95
  Pseudomonas sp. S08-1 OH686_18185 RNA polymerase sigma factor RpoS cofit 28 94
  Ralstonia solanacearum PSI07 RPSI07_RS18140 RNA polymerase sigma factor RpoS strong 29 95
  Pseudomonas sp. BP01 JOY50_RS23755 rpoS RNA polymerase sigma factor RpoS insig. 28 94
  Pseudomonas putida KT2440 PP_1623 RNA polymerase, sigma S (sigma 38) factor strong 28 94
  Pseudomonas fluorescens SBW25 PFLU_RS06430 RNA polymerase sigma factor RpoS cofit 28 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06430 RNA polymerase sigma factor RpoS strong 28 94
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS16420 RNA polymerase sigma factor RpoD/SigA no data 29 94
  Marinobacter adhaerens HP15 HP15_3857 RNA polymerase, sigma 70 subunit, RpoD family insig. 32 80
  Marinobacter adhaerens HP15 HP15_1283 RNA polymerase, sigma 70 subunit, RpoD family strong 29 95
  Pseudomonas segetis P6 ACVTMO_RS16960 rpoS RNA polymerase sigma factor RpoS strong 28 94
  Pseudomonas syringae pv. syringae B728a Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS sig. 28 94
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS cofit 28 94
  Pseudomonas aeruginosa MRSN321 DY961_RS14865 rpoS;go_function=DNA RNA polymerase sigma factor RpoS strong 27 94
  Pseudomonas aeruginosa PA14 IKLFDK_18495 RNA polymerase sigma factor RpoS strong 27 94
  Pseudomonas aeruginosa PUPa3 DQ20_RS42260 rpoS;go_function=DNA RNA polymerase sigma factor RpoS strong 27 94
  Pseudomonas orientalis W4I3 QF045_RS09210 RNA polymerase sigma factor RpoS insig. 27 94
  Pseudomonas stutzeri RCH2 Psest_2806 RNA polymerase sigma factor RpoS strong 29 94
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01443 RNA polymerase sigma factor RpoS cofit 27 94
  Pseudomonas sp. SVBP6 COO64_RS19795 rpoS RNA polymerase sigma factor RpoS insig. 27 94
  Pseudomonas simiae WCS417 PS417_06365 RNA polymerase sigma factor strong 27 94
  Ralstonia sp. UNC404CL21Col ABZR87_RS10875 RNA polymerase sigma factor RpoS strong 29 95
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4674 RNA polymerase sigma factor RpoS strong 27 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3115 RNA polymerase sigma factor RpoS strong 27 94
  Pseudomonas fluorescens FW300-N2E3 AO353_16615 RNA polymerase sigma factor RpoS strong 27 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3037 RNA polymerase sigma factor RpoS strong 27 94
  Pseudomonas sp. DMC3 GFF2084 RNA polymerase sigma factor RpoS strong 27 94
  Pseudomonas fluorescens FW300-N2C3 AO356_05885 RNA polymerase sigma factor RpoS strong 27 94
  Herbaspirillum seropedicae SmR1 HSERO_RS14830 RNA polymerase sigma factor RpoS insig. 31 95
  Variovorax sp. SCN45 GFF2842 RNA polymerase sigma factor RpoS insig. 30 93
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00844 RNA polymerase, sigma 38 subunit, RpoS no data 28 97
  Paraburkholderia graminis OAS925 ABIE53_002057 RNA polymerase nonessential primary-like sigma factor strong 28 97
  Burkholderia phytofirmans PsJN BPHYT_RS09115 RNA polymerase sigma factor RpoS sig. 28 97
  Pseudomonas sp. RS175 PFR28_00427 RNA polymerase sigma factor RpoS strong 27 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS22240 RNA polymerase sigma factor RpoS cofit 28 97
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15895 RNA polymerase sigma factor RpoD/SigA no data 28 93
  Mycobacterium tuberculosis H37Rv Rv2703 RNA polymerase sigma factor SigA (sigma-A) no data 28 94
  Rhodopseudomonas palustris CGA009 TX73_006610 RNA polymerase sigma factor RpoD no data 30 81
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04285 RNA polymerase sigma factor RpoD no data 28 93
  Phaeobacter inhibens DSM 17395 PGA1_c08800 RNA polymerase sigma factor RpoD no data 30 90
  Dinoroseobacter shibae DFL-12 Dshi_2261 RNA polymerase, sigma 70 subunit, RpoD family (RefSeq) no data 31 81
  Xanthobacter sp. DMC5 GFF3244 RNA polymerase sigma factor RpoD no data 30 81
  Rahnella sp. WP5 EX31_RS07825 RNA polymerase sigma factor RpoS strong 27 95
  Pectobacterium carotovorum WPP14 HER17_RS04350 RNA polymerase sigma factor RpoS strong 26 99
  Alteromonas macleodii MIT1002 MIT1002_00625 RNA polymerase sigma factor RpoS strong 28 97
  Klebsiella pneumoniae MKP103 KDGMDA_03220 RNA polymerase sigma factor RpoS strong 27 94
  Klebsiella pneumoniae MRSN742743 KFA93_RS18590 rpoS;go_function=DNA RNA polymerase sigma factor RpoS strong 27 94
  Variovorax sp. OAS795 ABID97_RS10730 sigma-70 family RNA polymerase sigma factor insig. 29 93
  Serratia liquefaciens MT49 IAI46_03790 RNA polymerase sigma factor RpoS strong 27 95
  Pantoea sp. MT58 IAI47_04235 RNA polymerase sigma factor RpoS strong 27 94
  Bosea sp. OAE506 ABIE41_RS11995 RNA polymerase sigma factor RpoD no data 30 81
  Desulfovibrio vulgaris Miyazaki F DvMF_0494 RNA polymerase, sigma 70 subunit, RpoD subfamily (RefSeq) no data 30 82
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10595 RNA polymerase sigma factor RpoD no data 30 81
  Escherichia coli ECRC100 OKFHMN_20495 rpoS RNA polymerase sigma factor RpoS cofit 27 94
  Escherichia coli BW25113 b2741 rpoS RNA polymerase sigma factor (NCBI) strong 27 94
  Erwinia amylovora T8 OLJFJH_09380 RNA polymerase sigma factor RpoS sig. 27 94
  Magnetospirillum magneticum AMB-1 AMB_RS03585 RNA polymerase sigma factor RpoD no data 31 81
  Dickeya dadantii 3937 DDA3937_RS16875 RNA polymerase sigma factor RpoS no data 27 94
  Dickeya dianthicola ME23 DZA65_RS18020 RNA polymerase sigma factor RpoS sig. 27 94
  Escherichia coli BL21 ECD_02591 RNA polymerase, sigma S (sigma 38) factor cofit 27 94
  Escherichia fergusonii Becca EFB2_01169 RNA polymerase sigma factor RpoS cofit 27 94
  Escherichia coli ECOR27 NOLOHH_12310 rpoS RNA polymerase sigma factor RpoS strong 27 94
  Escherichia coli ECOR38 HEPCGN_19675 rpoS RNA polymerase sigma factor RpoS strong 27 94
  Escherichia coli ECRC101 MCAODC_11020 rpoS RNA polymerase sigma factor RpoS strong 27 94
  Escherichia coli ECRC102 NIAGMN_18265 rpoS RNA polymerase sigma factor RpoS strong 27 94
  Escherichia coli ECRC62 BNILDI_10860 rpoS RNA polymerase sigma factor RpoS strong 27 94
  Escherichia coli ECRC98 JDDGAC_24160 rpoS RNA polymerase sigma factor RpoS strong 27 94
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00992 RNA polymerase sigma factor RpoS insig. 27 94
  Desulfovibrio vulgaris Hildenborough JW710 DVU1788 rpoD RNA polymerase sigma-70 factor (TIGR) no data 30 82
  Caulobacter crescentus NA1000 CCNA_03142 RNA polymerase sigma factor rpoD no data 30 81
  Caulobacter crescentus NA1000 Δfur CCNA_03142 RNA polymerase sigma factor rpoD no data 30 81
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_17500 rpoS RNA polymerase sigma factor RpoS strong 27 94
  Erwinia tracheiphila SCR3 LU632_RS06480 rpoS RNA polymerase sigma factor RpoS strong 27 94
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4788 RNA polymerase sigma factor RpoS strong 27 94
  Mycobacterium tuberculosis H37Rv Rv2710 RNA polymerase sigma factor SigB no data 30 81
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16485 RNA polymerase sigma factor RpoD/SigA insig. 30 93
  Sinorhizobium meliloti 1021 SMc01563 RNA polymerase sigma factor RpoD no data 30 81
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4729.1 RNA polymerase sigma factor RpoD no data 29 81
  Lysobacter sp. OAE881 ABIE51_RS02310 RNA polymerase sigma factor RpoD no data 29 81
  Agrobacterium fabrum C58 Atu2167 RNA polymerase sigma factor RpoD no data 30 81
  Rhizobium sp. OAE497 ABIE40_RS12720 RNA polymerase sigma factor RpoD no data 30 81
  Dickeya dianthicola 67-19 HGI48_RS16945 RNA polymerase sigma factor RpoS insig. 27 94
  Enterobacter sp. TBS_079 MPMX20_03627 RNA polymerase sigma factor RpoS strong 26 94
  Enterobacter asburiae PDN3 EX28DRAFT_2837 RNA polymerase, sigma 38 subunit, RpoS strong 26 94
  Synechococcus elongatus PCC 7942 Synpcc7942_0649 rpoD1 RNA polymerase sigma factor RpoD no data 29 81
  Azospirillum sp. SherDot2 MPMX19_00761 RNA polymerase sigma factor RpoD no data 30 81
  Shewanella sp. ANA-3 Shewana3_1124 RNA polymerase, sigma 38 subunit, RpoS (RefSeq) sig. 27 95
  Shewanella oneidensis MR-1 SO3432 rpoS RNA polymerase sigma-38 factor (NCBI ptt file) sig. 27 95
  Azospirillum brasilense Sp245 AZOBR_RS10905 RNA polymerase sigma factor RpoD no data 30 81
  Rhodanobacter sp. FW510-T8 OKGIIK_13865 rpoD RNA polymerase sigma factor RpoD no data 29 81
  Sphingomonas koreensis DSMZ 15582 Ga0059261_4238 RNA polymerase sigma factor RpoD, C-terminal domain no data 30 81
  Sphingobium sp. HT1-2 GFF2093 RNA polymerase sigma factor RpoD no data 30 81
  Shewanella amazonensis SB2B Sama_0823 RNA polymerase sigma-70 factor (RefSeq) no data 30 81
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13945 RNA polymerase sigma factor RpoD no data 29 81
  Rhodanobacter denitrificans MT42 LRK55_RS07055 RNA polymerase sigma factor RpoD no data 29 81
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07325 RNA polymerase sigma factor RpoD no data 29 81
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01085 RNA polymerase sigma factor RpoD no data 29 81
  Klebsiella michiganensis M5al BWI76_RS22645 RNA polymerase sigma factor RpoS strong 26 94
  Vibrio cholerae E7946 ATCC 55056 CSW01_02835 RNA polymerase sigma factor RpoS cofit 28 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3177 RNA polymerase sigma factor RpoD no data 30 81
  Escherichia coli BW25113 b3067 rpoD RNA polymerase sigma factor (NCBI) no data 30 81
  Klebsiella michiganensis M5al BWI76_RS24555 RNA polymerase sigma factor RpoD no data 30 81
  Klebsiella pneumoniae MKP103 KDGMDA_05365 RNA polymerase sigma factor RpoD no data 30 81
  Rhodospirillum rubrum S1H Rru_A2882 Sigma 70 (RpoD) (NCBI) no data 30 81
  Escherichia coli ECOR27 NOLOHH_10445 rpoD RNA polymerase sigma factor RpoD no data 30 81
  Escherichia coli ECOR38 HEPCGN_17510 rpoD RNA polymerase sigma factor RpoD no data 30 81
  Escherichia coli ECRC100 OKFHMN_18655 rpoD RNA polymerase sigma factor RpoD no data 30 81
  Escherichia coli ECRC101 MCAODC_09170 rpoD RNA polymerase sigma factor RpoD no data 30 81
  Escherichia coli ECRC102 NIAGMN_16420 rpoD RNA polymerase sigma factor RpoD no data 30 81
  Escherichia coli ECRC62 BNILDI_01070 rpoD RNA polymerase sigma factor RpoD no data 30 81
  Escherichia coli ECRC98 JDDGAC_22290 rpoD RNA polymerase sigma factor RpoD no data 30 81
  Escherichia coli ECRC99 KEDOAH_09490 rpoD RNA polymerase sigma factor RpoD no data 30 81
  Enterobacter sp. TBS_079 MPMX20_03909 RNA polymerase sigma factor RpoD no data 30 81
  Klebsiella pneumoniae MRSN742743 KFA93_RS12625 rpoD;go_function=DNA-binding RNA polymerase sigma factor RpoD no data 30 81