Homologs of Atu1316 from Agrobacterium fabrum C58

hypothetical protein
SEED: Putative Holliday junction resolvase YqgF
KEGG: putative holliday junction resolvase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu1316 hypothetical protein no data 100 100
o Rhizobium sp. OAE497 ABIE40_RS07415 Holliday junction resolvase RuvX no data 86 100
o Sinorhizobium meliloti 1021 SMc01355 Holliday junction resolvase-like protein no data 78 99
o Bosea sp. OAE506 ABIE41_RS17195 Holliday junction resolvase RuvX no data 63 87
o Dinoroseobacter shibae DFL-12 Dshi_1064 Holliday junction resolvase YqgF (RefSeq) no data 58 90
o Xanthobacter sp. DMC5 GFF926 Putative pre-16S rRNA nuclease no data 57 91
o Magnetospirillum magneticum AMB-1 AMB_RS08015 Holliday junction resolvase RuvX no data 52 97
o Phaeobacter inhibens DSM 17395 PGA1_c19190 RNAse H-fold protein YqgF no data 54 94
o Rhodospirillum rubrum S1H Rru_A3178 Holliday junction resolvase YqgF (NCBI) no data 52 96
o Rhodopseudomonas palustris CGA009 TX73_016100 Holliday junction resolvase RuvX no data 62 88
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04270 Holliday junction resolvase RuvX no data 49 95
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0078 RNAse H-fold protein YqgF no data 53 83
o Caulobacter crescentus NA1000 CCNA_02521 endonuclease involved in recombination no data 47 97
o Caulobacter crescentus NA1000 Δfur CCNA_02521 endonuclease involved in recombination cofit 47 97
o Azospirillum brasilense Sp245 AZOBR_RS20625 Holliday junction resolvase insig. 47 94
o Sphingobium sp. HT1-2 GFF2047 Putative pre-16S rRNA nuclease YqgF no data 50 84
o Azospirillum sp. SherDot2 MPMX19_01571 Putative pre-16S rRNA nuclease no data 46 93
o Synechocystis sp000284455 PCC 6803 SGL_RS17860 Holliday junction resolvase RuvX strong 38 87
o Synechococcus elongatus PCC 7942 Synpcc7942_2398 Holliday junction resolvase-like protein strong 36 85
o Bifidobacterium breve UCC2003 BBR_RS15065 Holliday junction resolvase RuvX no data 35 82
o Klebsiella pneumoniae MKP103 KDGMDA_04600 YqgE/AlgH family protein no data 33 82
o Klebsiella michiganensis M5al BWI76_RS24085 Holliday junction resolvase RuvX no data 33 82
o Escherichia coli BL21 ECD_02779 putative Holliday junction resolvase no data 33 81
o Escherichia fergusonii Becca EFB2_00953 Putative pre-16S rRNA nuclease no data 33 81
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00769 Putative pre-16S rRNA nuclease no data 33 81
o Escherichia coli Nissle 1917 ECOLIN_RS16405 Holliday junction resolvase RuvX no data 33 81
o Escherichia coli BW25113 b2949 yqgF Holliday junction resolvase-like protein (NCBI) no data 33 81
o Escherichia coli ECRC100 OKFHMN_19265 ruvX Holliday junction resolvase RuvX no data 33 81
o Escherichia coli ECRC101 MCAODC_09785 ruvX Holliday junction resolvase RuvX no data 33 81
o Escherichia coli ECRC102 NIAGMN_17030 ruvX Holliday junction resolvase RuvX no data 33 81
o Escherichia coli ECRC98 JDDGAC_22895 ruvX Holliday junction resolvase RuvX no data 33 81
o Escherichia coli ECRC99 KEDOAH_08875 ruvX Holliday junction resolvase RuvX no data 33 81
o Escherichia coli ECOR27 NOLOHH_11135 ruvX Holliday junction resolvase RuvX no data 33 81
o Escherichia coli ECOR38 HEPCGN_18570 ruvX Holliday junction resolvase RuvX no data 33 81
o Escherichia coli ECRC62 BNILDI_09715 ruvX Holliday junction resolvase RuvX no data 33 81
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3051 Putative Holliday junction resolvase YggF no data 33 81
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2349 Putative Holliday junction resolvase YggF no data 34 86
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1018 Putative Holliday junction resolvase YggF no data 34 86
o Pseudomonas orientalis W4I3 QF045_RS01090 Holliday junction resolvase RuvX no data 33 86
o Pseudomonas simiae WCS417 PS417_26690 Holliday junction resolvase no data 33 86
o Pseudomonas sp. DMC3 GFF202 Putative pre-16S rRNA nuclease no data 35 86
o Pseudomonas fluorescens FW300-N2C3 AO356_13460 Holliday junction resolvase no data 33 86
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4608 Putative Holliday junction resolvase YggF no data 33 86
o Pseudomonas fluorescens FW300-N2E3 AO353_08125 Holliday junction resolvase no data 34 86
o Pantoea sp. MT58 IAI47_03605 Holliday junction resolvase RuvX no data 33 81
o Pseudomonas sp. RS175 PFR28_04235 Putative pre-16S rRNA nuclease no data 33 86
o Pseudomonas fluorescens SBW25 PFLU_RS28335 Holliday junction resolvase RuvX no data 32 86
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28335 Holliday junction resolvase RuvX no data 32 86
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05475 Putative pre-16S rRNA nuclease no data 32 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20370 Holliday junction resolvase RuvX no data 34 80
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16090 Holliday junction resolvase RuvX no data 33 81
o Fusobacterium nucleatum SB010 HUW76_04355 Holliday junction resolvase RuvX no data 32 81
o Enterobacter asburiae PDN3 EX28DRAFT_2987 RNAse H-fold protein YqgF no data 32 81
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS22055 Holliday junction resolvase RuvX no data 30 84
o Shewanella oneidensis MR-1 SO3347 conserved hypothetical protein TIGR00250 (NCBI ptt file) no data 28 85
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1885 RNAse H-fold protein YqgF no data 32 84
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18175 Holliday junction resolvase RuvX no data 31 82
o Enterobacter sp. TBS_079 MPMX20_03807 Putative pre-16S rRNA nuclease no data 31 81
o Bacteroides stercoris CC31F HMPREF1181_RS04285 Holliday junction resolvase RuvX no data 31 86
o Kangiella aquimarina DSM 16071 B158DRAFT_0192 RNAse H-fold protein YqgF no data 30 89
o Pseudomonas segetis P6 ACVTMO_RS03075 ruvX Holliday junction resolvase RuvX no data 33 81
o Bacteroides thetaiotaomicron VPI-5482 BT0419 putative endonuclease (NCBI ptt file) no data 31 82
o Shewanella loihica PV-4 Shew_1143 Holliday junction resolvase-like protein (RefSeq) no data 30 84
o Dechlorosoma suillum PS Dsui_0594 RNAse H-fold protein YqgF no data 30 85
o Bacteroides ovatus ATCC 8483 BACOVA_01773 Holliday junction resolvase-like protein no data 30 82
o Shewanella sp. ANA-3 Shewana3_1199 Holliday junction resolvase-like protein (RefSeq) no data 27 85
o Paraburkholderia sabiae LMG 24235 QEN71_RS25790 Holliday junction resolvase RuvX no data 31 82
o Shewanella amazonensis SB2B Sama_2473 Holliday junction resolvase-like protein (RefSeq) no data 29 83
o Erwinia amylovora T8 OLJFJH_08560 Holliday junction resolvase RuvX no data 33 81
o Paraburkholderia graminis OAS925 ABIE53_001129 putative Holliday junction resolvase no data 36 82
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04815 putative holliday junction resolvase no data 34 82
o Pseudomonas sp. SVBP6 COO64_RS13585 ruvX Holliday junction resolvase RuvX no data 30 81
o Dickeya dianthicola 67-19 HGI48_RS18505 Holliday junction resolvase RuvX no data 30 81
o Serratia liquefaciens MT49 IAI46_21400 Holliday junction resolvase RuvX no data 31 83
o Rahnella sp. WP5 EX31_RS02675 Holliday junction resolvase RuvX no data 32 81
o Dickeya dadantii 3937 DDA3937_RS18570 Holliday junction resolvase RuvX no data 30 81
o Pseudomonas aeruginosa MRSN321 DY961_RS22000 ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES Holliday junction resolvase RuvX no data 31 85
o Pseudomonas aeruginosa PA14 IKLFDK_23400 Holliday junction resolvase RuvX no data 31 85
o Pseudomonas aeruginosa PUPa3 DQ20_RS37300 ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES Holliday junction resolvase RuvX no data 31 85
  Methylophilus sp. DMC18 GFF870 Putative pre-16S rRNA nuclease no data 30 83
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS00200 Holliday junction resolvase RuvX no data 28 82
o Dickeya dianthicola ME23 DZA65_RS19640 Holliday junction resolvase RuvX no data 30 81
o Cupriavidus basilensis FW507-4G11 RR42_RS15870 Holliday junction DNA helicase no data 29 81
o Alteromonas macleodii MIT1002 MIT1002_03057 Putative Holliday junction resolvase no data 27 81
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_03440 ruvX Holliday junction resolvase RuvX no data 32 78
  Erwinia tracheiphila SCR3 LU632_RS05470 ruvX Holliday junction resolvase RuvX no data 32 78
o Pseudomonas stutzeri RCH2 Psest_0293 RNAse H-fold protein YqgF no data 32 82
o Pseudomonas syringae pv. syringae B728a Psyr_0484 Conserved hypothetical protein 250 no data 30 84
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0484 Conserved hypothetical protein 250 no data 30 84
o Pseudomonas putida KT2440 PP_4996 Putative Holliday junction resolvase no data 34 81
o Burkholderia phytofirmans PsJN BPHYT_RS04225 Holliday junction resolvase no data 31 82
o Pseudomonas sp. BP01 JOY50_RS09710 ruvX Holliday junction resolvase RuvX no data 30 81
o Acinetobacter baumannii LAC-4 RR41_RS17390 Holliday junction resolvase RuvX no data 28 88
o Desulfovibrio vulgaris Miyazaki F DvMF_2352 Holliday junction resolvase YqgF (RefSeq) no data 37 81
o Phocaeicola dorei CL03T12C01 ABI39_RS20940 Holliday junction resolvase RuvX no data 27 82
o Mycobacterium tuberculosis H37Rv Rv2554c Conserved protein no data 33 84
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07050 Holliday junction resolvase RuvX no data 27 82
o Desulfovibrio vulgaris Hildenborough JW710 DVU3070 conserved hypothetical protein (TIGR) no data 35 81
o Pseudomonas sp. S08-1 OH686_10930 Putative pre-16S rRNA nuclease YqgF no data 30 83
  Acinetobacter radioresistens SK82 MPMX26_00237 Putative pre-16S rRNA nuclease no data 27 80