Homologs of AMB_RS21485 from Magnetospirillum magneticum AMB-1

tyrosine recombinase XerC
SEED: Site-specific tyrosine recombinase
KEGG: integrase/recombinase XerC

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Magnetospirillum magneticum AMB-1 AMB_RS21485 tyrosine recombinase XerC no data 100 100
o Rhodospirillum rubrum S1H Rru_A1220 Phage integrase (NCBI) no data 63 98
o Rhizobium sp. OAE497 ABIE40_RS17950 tyrosine recombinase XerC insig. 55 93
o Azospirillum sp. SherDot2 MPMX19_02110 Tyrosine recombinase XerC no data 51 97
o Azospirillum brasilense Sp245 AZOBR_RS03965 tyrosine recombinase XerC no data 53 97
o Agrobacterium fabrum C58 Atu2628 site-specific recombinase no data 52 96
o Sinorhizobium meliloti 1021 SMc02489 site-specific tyrosine recombinase XerC no data 53 93
o Rhodopseudomonas palustris CGA009 TX73_000945 tyrosine recombinase XerC sig. 51 99
o Bosea sp. OAE506 ABIE41_RS07870 tyrosine recombinase XerC strong 51 95
o Dinoroseobacter shibae DFL-12 Dshi_5002 xerC hypothetical protein (NCBI) no data 48 97
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2764 Site-specific recombinase XerD sig. 48 99
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12210 tyrosine recombinase XerC insig. 49 94
o Caulobacter crescentus NA1000 CCNA_00349 integrase/recombinase, XerC-CodV family strong 47 94
o Caulobacter crescentus NA1000 Δfur CCNA_00349 integrase/recombinase, XerC-CodV family cofit 47 94
o Phaeobacter inhibens DSM 17395 PGA1_c05760 putative tyrosine recombinase XerC strong 47 94
o Lysobacter sp. OAE881 ABIE51_RS03035 tyrosine recombinase XerC strong 41 94
o Rhodanobacter sp. FW510-T8 OKGIIK_15325 xerC tyrosine recombinase XerC no data 42 95
o Dechlorosoma suillum PS Dsui_0651 tyrosine recombinase XerC insig. 41 92
o Rhodanobacter denitrificans MT42 LRK55_RS08300 tyrosine recombinase XerC strong 42 95
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS08535 tyrosine recombinase XerC insig. 41 95
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS15025 tyrosine recombinase XerC strong 39 94
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4416 Tyrosine recombinase XerC strong 39 96
o Pseudomonas syringae pv. syringae B728a Psyr_0185 tyrosine recombinase XerC subunit sig. 38 94
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0185 tyrosine recombinase XerC subunit sig. 38 94
o Pseudomonas fluorescens FW300-N2C3 AO356_12725 recombinase XerC strong 39 96
o Pseudomonas fluorescens FW300-N2E3 AO353_09050 recombinase XerC sig. 37 96
o Pseudomonas sp. RS175 PFR28_04378 Tyrosine recombinase XerC strong 38 96
o Pseudomonas sp. S08-1 OH686_13785 tyrosine recombinase XerC insig. 39 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_842 Tyrosine recombinase XerC sig. 38 96
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2171 Tyrosine recombinase XerC insig. 38 96
o Rahnella sp. WP5 EX31_RS15165 tyrosine recombinase XerC strong 39 95
o Escherichia coli BL21 ECD_03687 site-specific tyrosine recombinase sig. 40 96
o Herbaspirillum seropedicae SmR1 HSERO_RS21475 recombinase XerC insig. 36 94
o Escherichia coli ECRC101 OKFHMN_14420 xerC tyrosine recombinase XerC no data 39 96
o Escherichia coli ECRC101 MCAODC_04925 xerC tyrosine recombinase XerC no data 39 96
o Escherichia coli ECRC102 NIAGMN_12175 xerC tyrosine recombinase XerC no data 39 96
o Escherichia coli ECRC98 JDDGAC_18045 xerC tyrosine recombinase XerC no data 39 96
o Escherichia coli ECRC99 KEDOAH_13730 xerC tyrosine recombinase XerC no data 39 96
o Pantoea sp. MT58 IAI47_18400 tyrosine recombinase XerC sig. 40 96
o Escherichia coli ECOR27 NOLOHH_06550 xerC tyrosine recombinase XerC no data 39 96
o Escherichia coli ECOR38 HEPCGN_13125 xerC tyrosine recombinase XerC insig. 39 96
o Escherichia coli ECRC62 BNILDI_04985 xerC tyrosine recombinase XerC no data 39 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04239 Tyrosine recombinase XerC insig. 39 96
o Escherichia coli Nissle 1917 ECOLIN_RS21875 tyrosine recombinase XerC cofit 39 96
o Escherichia coli BW25113 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) strong 39 96
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.847.1 Site-specific tyrosine recombinase no data 37 95
o Shewanella amazonensis SB2B Sama_3247 integrase/recombinase XerC (RefSeq) strong 37 96
o Escherichia fergusonii Becca EFB2_04826 Tyrosine recombinase XerC strong 39 96
o Pseudomonas putida KT2440 PP_5230 Tyrosine recombinase XerC strong 38 96
o Castellaniella sp019104865 MT123 ABCV34_RS13455 tyrosine recombinase XerC insig. 39 95
o Shewanella loihica PV-4 Shew_0325 tyrosine recombinase XerC (RefSeq) sig. 37 94
  Alteromonas macleodii MIT1002 MIT1002_00157 Tyrosine recombinase XerC insig. 36 94
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF239 Tyrosine recombinase XerC no data 39 96
o Pseudomonas stutzeri RCH2 Psest_3767 tyrosine recombinase XerC strong 37 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02202 integrase/recombinase XerC no data 38 94
o Erwinia tracheiphila SCR3 LU632_RS24135 xerC tyrosine recombinase XerC no data 38 96
o Paraburkholderia graminis OAS925 ABIE53_000426 integrase/recombinase XerC no data 38 94
o Cupriavidus basilensis FW507-4G11 RR42_RS00615 recombinase XerC sig. 36 99
o Klebsiella michiganensis M5al BWI76_RS01210 tyrosine recombinase XerC strong 39 95
o Burkholderia phytofirmans PsJN BPHYT_RS01655 tyrosine recombinase XerC no data 37 94
o Ralstonia solanacearum PSI07 RPSI07_RS23690 tyrosine recombinase XerC insig. 37 92
o Enterobacter asburiae PDN3 EX28DRAFT_4480 tyrosine recombinase XerC no data 38 96
o Vibrio cholerae E7946 ATCC 55056 CSW01_00650 tyrosine recombinase XerC strong 36 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS05065 tyrosine recombinase XerC strong 35 94
o Pseudomonas fluorescens SBW25 PFLU_RS29280 tyrosine recombinase XerC sig. 37 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29280 tyrosine recombinase XerC strong 37 96
o Pseudomonas simiae WCS417 PS417_27595 recombinase XerC sig. 37 96
o Pectobacterium carotovorum WPP14 HER17_RS01350 tyrosine recombinase XerC strong 37 99
o Serratia liquefaciens MT49 IAI46_00725 tyrosine recombinase XerC insig. 37 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF547 Tyrosine recombinase XerC sig. 38 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS09675 tyrosine recombinase XerC sig. 37 94
o Ralstonia solanacearum UW163 UW163_RS03905 tyrosine recombinase XerC insig. 37 94
o Shewanella sp. ANA-3 Shewana3_0393 tyrosine recombinase XerC (RefSeq) strong 36 92
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02835 integrase strong 32 94
  Kangiella aquimarina DSM 16071 B158DRAFT_2265 tyrosine recombinase XerD strong 35 94
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17800 tyrosine-type recombinase/integrase insig. 34 94
  Shewanella loihica PV-4 Shew_0770 tyrosine recombinase XerD (RefSeq) strong 35 94
o Acidovorax sp. GW101-3H11 Ac3H11_1995 Tyrosine recombinase XerC sig. 37 91
o Ralstonia solanacearum GMI1000 RS_RS00260 Tyrosine recombinase XerC 1 insig. 38 92
  Dickeya dadantii 3937 DDA3937_RS19890 tyrosine recombinase XerC no data 37 94
o Acinetobacter radioresistens SK82 MPMX26_02230 Tyrosine recombinase XerC no data 36 92
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09520 site-specific tyrosine recombinase XerD sig. 32 94
o Enterobacter sp. TBS_079 MPMX20_04465 Tyrosine recombinase XerC strong 39 96
  Marinobacter adhaerens HP15 HP15_250 site-specific tyrosine recombinase XerC strong 37 92
o Variovorax sp. SCN45 GFF4490 Site-specific tyrosine recombinase XerC strong 36 95
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0827 Site-specific recombinase XerD insig. 31 93
o Shewanella oneidensis MR-1 SO4306 xerC integrase/recombinase XerC (NCBI ptt file) strong 37 92
o Paraburkholderia sabiae LMG 24235 QEN71_RS00355 tyrosine recombinase XerC no data 35 94
  Dickeya dianthicola ME23 DZA65_RS21090 tyrosine recombinase XerC insig. 37 94
  Mycobacterium tuberculosis H37Rv Rv1701 Probable integrase/recombinase sig. 37 96
o Bifidobacterium breve UCC2003 BBR_RS16655 tyrosine recombinase XerC strong 35 94
  Dickeya dianthicola 67-19 HGI48_RS20045 tyrosine recombinase XerC strong 36 94
  Shewanella amazonensis SB2B Sama_2739 integrase/recombinase XerD (RefSeq) strong 36 94
  Serratia liquefaciens MT49 IAI46_20730 site-specific tyrosine recombinase XerD insig. 35 94
  Alteromonas macleodii MIT1002 MIT1002_00786 Tyrosine recombinase XerD insig. 32 96
  Rahnella sp. WP5 EX31_RS13480 site-specific tyrosine recombinase XerD strong 33 99
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00850 site-specific tyrosine recombinase XerD no data 32 94
  Escherichia coli ECRC102 NIAGMN_17335 xerD site-specific tyrosine recombinase XerD no data 35 96
  Kangiella aquimarina DSM 16071 B158DRAFT_0244 tyrosine recombinase XerC subunit strong 32 94
  Escherichia coli ECOR38 HEPCGN_18860 xerD site-specific tyrosine recombinase XerD cofit 35 96