Homologs of radC from Escherichia coli BW25113

radC: DNA repair protein (VIMSS)
SEED: DNA repair protein RadC
KEGG: DNA repair protein RadC

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Escherichia coli BW25113 b3638 radC DNA repair protein (VIMSS) insig. 100 100
o Escherichia fergusonii Becca EFB2_00175 hypothetical protein insig. 99 100
o Escherichia coli Nissle 1917 ECOLIN_RS20730 DNA repair protein RadC insig. 99 100
o Escherichia coli ECOR27 NOLOHH_07500 radC DNA repair protein RadC cofit 99 100
o Escherichia coli ECRC62 BNILDI_04015 radC DNA repair protein RadC insig. 99 100
o Escherichia coli BL21 ECD_03495 UPF0758 family protein insig. 99 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00064 hypothetical protein insig. 99 100
o Escherichia coli ECOR38 HEPCGN_14445 radC DNA repair protein RadC cofit 99 100
o Escherichia coli ECRC101 OKFHMN_15620 radC DNA repair protein RadC insig. 99 100
o Escherichia coli ECRC101 MCAODC_06130 radC DNA repair protein RadC insig. 99 100
o Escherichia coli ECRC102 NIAGMN_13380 radC DNA repair protein RadC insig. 99 100
o Escherichia coli ECRC98 JDDGAC_19245 radC DNA repair protein RadC no data 99 100
o Escherichia coli ECRC99 KEDOAH_12530 radC DNA repair protein RadC no data 99 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF371 DNA repair protein RadC insig. 84 97
o Klebsiella michiganensis M5al BWI76_RS27365 hypothetical protein insig. 74 97
o Enterobacter sp. TBS_079 MPMX20_00097 hypothetical protein insig. 73 98
o Enterobacter asburiae PDN3 EX28DRAFT_3888 DNA repair protein radc insig. 72 100
o Pantoea sp. MT58 IAI47_00620 DNA repair protein RadC insig. 61 96
o Dickeya dianthicola 67-19 HGI48_RS00700 DNA repair protein RadC insig. 58 96
o Dickeya dianthicola ME23 DZA65_RS00755 JAB domain-containing protein insig. 58 96
o Dickeya dadantii 3937 DDA3937_RS20515 DNA repair protein RadC insig. 58 96
o Pectobacterium carotovorum WPP14 HER17_RS20830 DNA repair protein RadC insig. 59 97
o Serratia liquefaciens MT49 IAI46_24825 DNA repair protein RadC cofit 56 97
o Rahnella sp. WP5 EX31_RS14470 JAB domain-containing protein insig. 58 96
o Erwinia tracheiphila SCR3 LU632_RS21995 radC DNA repair protein RadC insig. 57 96
o Marinobacter adhaerens HP15 HP15_3321 DNA repair protein RadC-like protein insig. 51 96
o Pseudomonas stutzeri RCH2 Psest_3803 DNA repair protein radc insig. 49 96
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4377 DNA repair protein RadC insig. 48 96
o Vibrio cholerae E7946 ATCC 55056 CSW01_01155 DNA repair protein RadC insig. 51 96
o Pseudomonas fluorescens FW300-N2C3 AO356_12545 hypothetical protein insig. 47 96
o Pseudomonas sp. RS175 PFR28_04412 hypothetical protein insig. 47 96
o Pseudomonas fluorescens FW300-N2E3 AO353_09220 hypothetical protein insig. 47 96
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2126 DNA repair protein RadC insig. 45 96
o Pseudomonas sp. S08-1 OH686_13620 UPF0758 family protein insig. 47 96
o Pseudomonas simiae WCS417 PS417_27770 hypothetical protein insig. 47 96
o Pseudomonas fluorescens SBW25 PFLU_RS29445 JAB domain-containing protein insig. 46 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29445 JAB domain-containing protein insig. 46 96
o Pseudomonas fluorescens GW456-L13 PfGW456L13_798 DNA repair protein RadC insig. 48 96
o Shewanella amazonensis SB2B Sama_0327 radC DNA repair protein RadC (RefSeq) cofit 46 96
o Dechlorosoma suillum PS Dsui_1537 DNA repair protein radc cofit 44 95
o Shewanella loihica PV-4 Shew_3481 DNA repair protein RadC (RefSeq) insig. 43 100
o Pseudomonas syringae pv. syringae B728a Psyr_0222 DNA replication and repair protein RadC insig. 44 96
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0222 DNA replication and repair protein RadC insig. 44 96
o Ralstonia solanacearum PSI07 RPSI07_RS12675 JAB domain-containing protein insig. 45 95
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS04710 JAB domain-containing protein insig. 46 95
o Ralstonia solanacearum UW163 UW163_RS08960 JAB domain-containing protein insig. 46 95
o Ralstonia solanacearum GMI1000 RS_RS12270 JAB domain-containing protein insig. 46 95
o Kangiella aquimarina DSM 16071 B158DRAFT_0781 DNA repair protein radc insig. 42 96
o Pseudomonas putida KT2440 PP_5284 UPF0758 protein PP_5284 sig. 45 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1170 DNA repair protein RadC insig. 46 96
o Paraburkholderia graminis OAS925 ABIE53_003289 DNA repair protein RadC insig. 42 96
o Rhodanobacter denitrificans MT42 LRK55_RS08695 DNA repair protein RadC insig. 46 96
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS09165 DNA repair protein RadC insig. 46 96
o Burkholderia phytofirmans PsJN BPHYT_RS15625 hypothetical protein insig. 42 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS03085 DNA repair protein RadC insig. 42 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04066 DNA replication and repair protein RadC insig. 42 96
o Alteromonas macleodii MIT1002 MIT1002_00049 DNA repair protein RadC insig. 41 96
o Rhodanobacter sp. FW510-T8 OKGIIK_15660 radC DNA repair protein RadC insig. 46 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS15615 DNA repair protein RadC insig. 46 96
o Cupriavidus basilensis FW507-4G11 RR42_RS16995 hypothetical protein insig. 41 96
o Shewanella oneidensis MR-1 SO4248 radC DNA repair protein RadC (NCBI ptt file) strong 45 96
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4897.1 DNA repair protein RadC insig. 40 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS00330 DNA repair protein RadC insig. 43 95
o Shewanella sp. ANA-3 Shewana3_3770 radC DNA repair protein RadC (RefSeq) strong 45 96
o Lysobacter sp. OAE881 ABIE51_RS00095 DNA repair protein RadC insig. 42 96
o Variovorax sp. OAS795 ABID97_RS07700 DNA repair protein RadC insig. 45 96
o Variovorax sp. SCN45 GFF5700 UPF0758 family protein insig. 44 96
o Herbaspirillum seropedicae SmR1 HSERO_RS05945 hypothetical protein insig. 41 95
o Castellaniella sp019104865 MT123 ABCV34_RS00910 DNA repair protein RadC insig. 41 96
o Acinetobacter radioresistens SK82 MPMX26_02636 hypothetical protein no data 39 95
o Acidovorax sp. GW101-3H11 Ac3H11_1774 DNA repair protein RadC insig. 40 96
  Klebsiella michiganensis M5al BWI76_RS10145 hypothetical protein no data 55 54
  Erwinia tracheiphila SCR3 LU632_RS04120 radC DNA repair protein RadC insig. 58 54
  Escherichia coli Nissle 1917 ECOLIN_RS21030 DNA repair protein RadC insig. 55 55
  Klebsiella michiganensis M5al BWI76_RS21670 hypothetical protein no data 54 54
  Enterobacter sp. TBS_079 MPMX20_00581 hypothetical protein insig. 51 54
  Dickeya dianthicola 67-19 HGI48_RS14960 DNA repair protein RadC insig. 50 55
  Vibrio cholerae E7946 ATCC 55056 CSW01_08960 DNA repair protein RadC insig. 53 53
  Shewanella sp. ANA-3 Shewana3_1252 DNA repair protein RadC (RefSeq) insig. 42 65
  Ralstonia solanacearum GMI1000 RS_RS13130 DNA repair protein RadC insig. 42 66
  Shewanella loihica PV-4 Shew_1257 DNA repair protein RadC (RefSeq) insig. 52 55
  Variovorax sp. SCN45 GFF4374 UPF0758 family protein insig. 41 66
  Enterobacter sp. TBS_079 MPMX20_00341 hypothetical protein insig. 53 54
o Phaeobacter inhibens DSM 17395 PGA1_c34550 DNA repair protein RadC insig. 33 95
  Dickeya dadantii 3937 DDA3937_RS03870 DNA repair protein RadC insig. 46 61
  Dickeya dianthicola 67-19 HGI48_RS08270 DNA repair protein RadC insig. 43 65
  Castellaniella sp019104865 MT123 ABCV34_RS15885 DNA repair protein RadC insig. 41 65
  Rahnella sp. WP5 EX31_RS22870 DNA repair protein RadC insig. 49 52
o Dinoroseobacter shibae DFL-12 Dshi_3569 DNA repair protein RadC (RefSeq) insig. 35 95
  Vibrio cholerae E7946 ATCC 55056 CSW01_02700 hypothetical protein insig. 45 62
  Ralstonia solanacearum UW163 UW163_RS24075 DNA repair protein RadC insig. 41 68
  Escherichia coli BW25113 b2644 yfjY CP4-57 prophage; predicted DNA repair protein (NCBI) insig. 46 54
  Shewanella oneidensis MR-1 SO1455 DNA repair protein, RadC family (NCBI ptt file) insig. 50 54
  Escherichia coli BW25113 b0247 ykfG CP4-6 prophage; predicted DNA repair protein (NCBI) insig. 48 54
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3498 DNA repair protein RadC insig. 41 68
  Escherichia coli ECOR38 HEPCGN_14040 yeeS UPF0758 protein YeeS insig. 49 54
  Escherichia fergusonii Becca EFB2_04442 hypothetical protein insig. 48 54
  Escherichia coli BW25113 b2002 yeeS CP4-44 prophage; predicted DNA repair protein (NCBI) insig. 49 53
  Escherichia fergusonii Becca EFB2_00050 hypothetical protein no data 48 54
  Escherichia fergusonii Becca EFB2_01854 hypothetical protein no data 48 54