Conservation of cofitness between PP_0290 and PP_5128 in Pseudomonas putida KT2440

101 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0290 Imidazole glycerol phosphate synthase subunit HisH 1.0 PP_5128 Dihydroxy-acid dehydratase 0.89 7
Pseudomonas simiae WCS417 0.94 PS417_01565 imidazole glycerol phosphate synthase 0.96 PS417_26890 dihydroxy-acid dehydratase 0.85 13
Pseudomonas fluorescens SBW25 0.93 PFLU_RS01610 imidazole glycerol phosphate synthase subunit HisH 0.96 PFLU_RS28535 dihydroxy-acid dehydratase 0.66 15
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS01610 imidazole glycerol phosphate synthase subunit HisH 0.96 PFLU_RS28535 dihydroxy-acid dehydratase 0.67 9
Pseudomonas sp. RS175 0.93 PFR28_04930 Imidazole glycerol phosphate synthase subunit HisH 0.96 PFR28_04278 Dihydroxy-acid dehydratase 0.78 4
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_12075 imidazole glycerol phosphate synthase subunit HisH 0.97 AO353_08345 dihydroxy-acid dehydratase 0.90 7
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_1626 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 0.96 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.80 15
Pseudomonas stutzeri RCH2 0.92 Psest_0153 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.94 Psest_0234 dihydroxy-acid dehydratase
Pseudomonas sp. S08-1 0.92 OH686_14580 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.93 OH686_14100 dihydroxy-acid dehydratase 0.79 22
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_4896 imidazole glycerol phosphate synthase subunit hisH 0.94 Psyr_0469 dihydroxyacid dehydratase 0.90 1
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_4896 imidazole glycerol phosphate synthase subunit hisH 0.94 Psyr_0469 dihydroxyacid dehydratase 0.92 8
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_3841 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 0.96 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.81 14
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_361 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 0.97 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.84 30
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_09810 imidazole glycerol phosphate synthase subunit HisH 0.96 AO356_13250 dihydroxy-acid dehydratase 0.85 13
Marinobacter adhaerens HP15 0.70 HP15_3011 imidazole glycerol phosphate synthase subunit HisH 0.78 HP15_595 dihydroxy-acid dehydratase
Acinetobacter radioresistens SK82 0.54 MPMX26_02846 Imidazole glycerol phosphate synthase subunit HisH 0.28 MPMX26_03019 Dihydroxy-acid dehydratase low > 36
Dechlorosoma suillum PS 0.48 Dsui_1416 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.75 Dsui_1122 dihydroxy-acid dehydratase
Variovorax sp. OAS795 0.47 ABID97_RS23135 imidazole glycerol phosphate synthase subunit HisH 0.31 ABID97_RS17500 dihydroxy-acid dehydratase
Variovorax sp. SCN45 0.47 GFF5350 Imidazole glycerol phosphate synthase amidotransferase subunit HisH 0.31 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9)
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS18895 imidazole glycerol phosphate synthase 0.30 RR42_RS16210 dihydroxy-acid dehydratase
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS20325 IGP synthase, amidotransferase subunit (EC 4.3.2.10) (from data) 0.72 HSERO_RS02650 dihydroxy-acid dehydratase 0.82 11
Ralstonia solanacearum GMI1000 0.45 RS_RS14770 imidazole glycerol phosphate synthase subunit HisH 0.30 RS_RS12105 dihydroxy-acid dehydratase
Ralstonia solanacearum PSI07 0.45 RPSI07_RS10410 imidazole glycerol phosphate synthase subunit HisH 0.30 RPSI07_RS12840 dihydroxy-acid dehydratase
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS02480 imidazole glycerol phosphate synthase subunit HisH 0.81 ABZR87_RS00240 dihydroxy-acid dehydratase low > 80
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS06825 imidazole glycerol phosphate synthase subunit HisH 0.29 RALBFv3_RS04535 dihydroxy-acid dehydratase
Ralstonia solanacearum UW163 0.44 UW163_RS06790 imidazole glycerol phosphate synthase subunit HisH 0.29 UW163_RS09135 dihydroxy-acid dehydratase
Acidovorax sp. GW101-3H11 0.43 Ac3H11_4731 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 0.80 Ac3H11_955 Dihydroxy-acid dehydratase (EC 4.2.1.9)
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS17690 imidazole glycerol phosphate synthase 0.71 BPHYT_RS10100 dihydroxy-acid dehydratase 0.76 43
Paraburkholderia graminis OAS925 0.42 ABIE53_003697 glutamine amidotransferase 0.80 ABIE53_006513 dihydroxy-acid dehydratase
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS27845 imidazole glycerol phosphate synthase subunit HisH 0.80 QEN71_RS21095 dihydroxy-acid dehydratase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_05657 imidazole glycerol phosphate synthase subunit hisH 0.80 H281DRAFT_05312 dihydroxyacid dehydratase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF1311 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 0.65 GFF2073 Dihydroxy-acid dehydratase (EC 4.2.1.9)
Azospirillum sp. SherDot2 0.39 MPMX19_02545 Imidazole glycerol phosphate synthase subunit HisH 0.73 MPMX19_05356 Dihydroxy-acid dehydratase
Castellaniella sp019104865 MT123 0.38 ABCV34_RS11240 imidazole glycerol phosphate synthase subunit HisH 0.70 ABCV34_RS14810 dihydroxy-acid dehydratase low > 48
Methanococcus maripaludis S2 0.38 MMP_RS01385 imidazole glycerol phosphate synthase subunit HisH 0.33 MMP_RS01700 dihydroxy-acid dehydratase low > 25
Methanococcus maripaludis JJ 0.38 MMJJ_RS03990 imidazole glycerol phosphate synthase subunit HisH 0.33 MMJJ_RS03675 dihydroxy-acid dehydratase
Azospirillum brasilense Sp245 0.38 AZOBR_RS01670 imidazole glycerol phosphate synthase 0.75 AZOBR_RS15015 dihydroxy-acid dehydratase low > 97
Desulfovibrio vulgaris Miyazaki F 0.36 DvMF_2305 hisH IGP synthase, amidotransferase subunit (EC 4.3.2.10) (from data) 0.37 DvMF_2034 dihydroxy-acid dehydratase (RefSeq) 0.84 29
Synechococcus elongatus PCC 7942 0.36 Synpcc7942_1481 hisH imidazole glycerol phosphate synthase subunit HisH 0.74 Synpcc7942_0626 ilvD dihydroxy-acid dehydratase
Bosea sp. OAE506 0.35 ABIE41_RS03955 imidazole glycerol phosphate synthase subunit HisH 0.30 ABIE41_RS15690 dihydroxy-acid dehydratase
Desulfovibrio vulgaris Hildenborough JW710 0.35 DVU0285 hisH IGP synthase, amidotransferase subunit (EC 4.3.2.10) (from data) 0.37 DVU3373 ilvD dihydroxy-acid dehydratase (TIGR) 0.85 27
Rhodopseudomonas palustris CGA009 0.34 TX73_001615 imidazole glycerol phosphate synthase subunit HisH 0.74 TX73_007515 dihydroxy-acid dehydratase
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS06715 imidazole glycerol phosphate synthase subunit HisH 0.27 ABZR86_RS15945 dihydroxy-acid dehydratase 0.94 33
Phaeobacter inhibens DSM 17395 0.34 PGA1_c09320 imidazole glycerol phosphate synthase subunit HisH 0.73 PGA1_c29490 dihydroxy-acid dehydratase LivD
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_05765 imidazole glycerol phosphate synthase subunit HisH 0.77 CSW01_00140 dihydroxy-acid dehydratase low > 62
Brevundimonas sp. GW460-12-10-14-LB2 0.33 A4249_RS10705 imidazole glycerol phosphate synthase subunit HisH 0.25 A4249_RS10030 dihydroxy-acid dehydratase 0.98 24
Magnetospirillum magneticum AMB-1 0.32 AMB_RS22935 imidazole glycerol phosphate synthase subunit HisH 0.70 AMB_RS12770 dihydroxy-acid dehydratase
Pectobacterium carotovorum WPP14 0.32 HER17_RS12245 imidazole glycerol phosphate synthase subunit HisH 0.73 HER17_RS01075 dihydroxy-acid dehydratase 0.97 5
Mucilaginibacter yixingensis YX-36 DSM 26809 0.32 ABZR88_RS06865 imidazole glycerol phosphate synthase subunit HisH 0.27 ABZR88_RS11575 dihydroxy-acid dehydratase 0.72 8
Dickeya dadantii 3937 0.32 DDA3937_RS09720 imidazole glycerol phosphate synthase subunit HisH 0.73 DDA3937_RS20155 dihydroxy-acid dehydratase 0.89 20
Bacteroides stercoris CC31F 0.32 HMPREF1181_RS11080 imidazole glycerol phosphate synthase subunit HisH 0.62 HMPREF1181_RS08335 dihydroxy-acid dehydratase 0.86 4
Phocaeicola vulgatus CL09T03C04 0.32 HMPREF1058_RS06165 imidazole glycerol phosphate synthase subunit HisH 0.62 HMPREF1058_RS16815 dihydroxy-acid dehydratase 0.73 23
Shewanella sp. ANA-3 0.32 Shewana3_1850 hisH imidazole glycerol phosphate synthase subunit HisH (RefSeq) 0.74 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) 0.97 1
Serratia liquefaciens MT49 0.32 IAI46_08195 imidazole glycerol phosphate synthase subunit HisH 0.72 IAI46_24345 dihydroxy-acid dehydratase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.2945.1 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 0.87 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.70 48
Phocaeicola dorei CL03T12C01 0.32 ABI39_RS19920 imidazole glycerol phosphate synthase subunit HisH 0.62 ABI39_RS12715 dihydroxy-acid dehydratase 0.73 16
Echinicola vietnamensis KMM 6221, DSM 17526 0.32 Echvi_2514 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.28 Echvi_2055 dihydroxy-acid dehydratase 0.87 12
Erwinia tracheiphila SCR3 0.32 LU632_RS08930 hisH imidazole glycerol phosphate synthase subunit HisH 0.72 LU632_RS24400 ilvD dihydroxy-acid dehydratase 0.68 63
Shewanella amazonensis SB2B 0.32 Sama_1945 hisH imidazole glycerol phosphate synthase subunit HisH (RefSeq) 0.74 Sama_3279 dihydroxy-acid dehydratase (RefSeq) 0.95 9
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_1046 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.28 Ga0059261_4216 Dihydroxyacid dehydratase/phosphogluconate dehydratase 0.97 14
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_03851 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.72 CCNA_03139 dihydroxy-acid dehydratase low > 67
Caulobacter crescentus NA1000 0.31 CCNA_03851 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.72 CCNA_03139 dihydroxy-acid dehydratase 0.98 5
Alteromonas macleodii MIT1002 0.31 MIT1002_02636 Imidazole glycerol phosphate synthase subunit HisH 0.78 MIT1002_04041 Dihydroxy-acid dehydratase 0.99 9
Rhizobium sp. OAE497 0.31 ABIE40_RS19450 imidazole glycerol phosphate synthase subunit HisH 0.76 ABIE40_RS08005 dihydroxy-acid dehydratase 0.90 43
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_05100 imidazole glycerol phosphate synthase subunit HisH 0.27 CA264_06935 dihydroxy-acid dehydratase low > 74
Bacteroides thetaiotaomicron VPI-5482 0.31 BT1380 imidazole glycerol phosphate synthase subunit hisH (NCBI ptt file) 0.61 BT2078 dihydroxy-acid dehydratase (NCBI ptt file) 0.74 3
Rhodospirillum rubrum S1H 0.31 Rru_A3596 Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (NCBI) 0.70 Rru_A1786 Dihydroxy-acid dehydratase (NCBI) 0.56 52
Dickeya dianthicola ME23 0.31 DZA65_RS10040 imidazole glycerol phosphate synthase subunit HisH 0.72 DZA65_RS21335 dihydroxy-acid dehydratase
Bacteroides ovatus ATCC 8483 0.31 BACOVA_00221 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.60 BACOVA_03302 dihydroxy-acid dehydratase 0.86 14
Dinoroseobacter shibae DFL-12 0.31 Dshi_0795 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (RefSeq) 0.29 Dshi_0129 dihydroxy-acid dehydratase (RefSeq)
Rahnella sp. WP5 0.31 EX31_RS11455 imidazole glycerol phosphate synthase subunit HisH 0.69 EX31_RS15005 dihydroxy-acid dehydratase 0.96 8
Dickeya dianthicola 67-19 0.31 HGI48_RS09730 imidazole glycerol phosphate synthase subunit HisH 0.73 HGI48_RS20295 dihydroxy-acid dehydratase 0.81 34
Parabacteroides merdae CL09T00C40 0.31 HMPREF1078_RS13575 imidazole glycerol phosphate synthase subunit HisH 0.63 HMPREF1078_RS16695 dihydroxy-acid dehydratase low > 61
Klebsiella michiganensis M5al 0.31 BWI76_RS18940 imidazole glycerol phosphate synthase subunit HisH 0.74 BWI76_RS00975 dihydroxy-acid dehydratase 0.92 3
Shewanella oneidensis MR-1 0.30 SO2070 hisH amidotransferase HisH (NCBI ptt file) 0.74 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) 0.98 10
Mycobacterium tuberculosis H37Rv 0.30 Rv1602 Probable amidotransferase HisH 0.32 Rv0189c Probable dihydroxy-acid dehydratase IlvD (dad)
Enterobacter asburiae PDN3 0.30 EX28DRAFT_0536 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.73 EX28DRAFT_4443 dihydroxy-acid dehydratase 0.76 25
Shewanella loihica PV-4 0.30 Shew_2201 hisH imidazole glycerol phosphate synthase subunit HisH (RefSeq) 0.74 Shew_0292 dihydroxy-acid dehydratase (RefSeq) 0.98 16
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS03620 imidazole glycerol phosphate synthase subunit HisH 0.27 CA265_RS15795 dihydroxy-acid dehydratase 0.93 15
Enterobacter sp. TBS_079 0.30 MPMX20_03005 Imidazole glycerol phosphate synthase subunit HisH 0.73 MPMX20_04499 Dihydroxy-acid dehydratase 0.93 9
Sinorhizobium meliloti 1021 0.30 SMc02572 imidazole glycerol phosphate synthase subunit HisH 0.77 SMc04045 dihydroxy-acid dehydratase 0.86 14
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_04965 hisH imidazole glycerol phosphate synthase subunit HisH 0.27 OKGIIK_13600 ilvD dihydroxy-acid dehydratase low > 52
Pantoea sp. MT58 0.30 IAI47_07075 imidazole glycerol phosphate synthase subunit HisH 0.73 IAI47_01035 dihydroxy-acid dehydratase 0.97 7
Rhodanobacter denitrificans MT42 0.29 LRK55_RS01370 imidazole glycerol phosphate synthase subunit HisH 0.25 LRK55_RS09960 dihydroxy-acid dehydratase low > 63
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF3909 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 0.73 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.28 54
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS01590 imidazole glycerol phosphate synthase subunit HisH 0.25 LRK54_RS10320 dihydroxy-acid dehydratase 0.41 56
Escherichia coli ECRC99 0.29 KEDOAH_03650 hisH imidazole glycerol phosphate synthase subunit HisH 0.74 KEDOAH_13510 ilvD dihydroxy-acid dehydratase
Escherichia coli ECRC62 0.29 BNILDI_14725 hisH imidazole glycerol phosphate synthase subunit HisH 0.74 BNILDI_04750 ilvD dihydroxy-acid dehydratase
Escherichia coli ECRC98 0.29 JDDGAC_28610 hisH imidazole glycerol phosphate synthase subunit HisH 0.74 JDDGAC_18260 ilvD dihydroxy-acid dehydratase
Escherichia coli ECRC101 0.29 OKFHMN_24500 hisH imidazole glycerol phosphate synthase subunit HisH 0.74 OKFHMN_14640 ilvD dihydroxy-acid dehydratase
Escherichia coli BW25113 0.29 b2023 hisH imidazole glycerol phosphate synthase subunit HisH (NCBI) 0.74 b3771 ilvD dihydroxy-acid dehydratase (NCBI) 0.95 2
Escherichia coli ECOR38 0.29 HEPCGN_03205 hisH imidazole glycerol phosphate synthase subunit HisH 0.74 HEPCGN_13350 ilvD dihydroxy-acid dehydratase low > 85
Escherichia coli Nissle 1917 0.29 ECOLIN_RS11960 imidazole glycerol phosphate synthase subunit HisH 0.74 ECOLIN_RS21665 dihydroxy-acid dehydratase
Agrobacterium fabrum C58 0.29 Atu0041 glutamine amidotransferase 0.76 Atu1918 dihydroxy-acid dehydratase
Escherichia coli ECRC101 0.29 MCAODC_20440 hisH imidazole glycerol phosphate synthase subunit HisH 0.74 MCAODC_05145 ilvD dihydroxy-acid dehydratase
Escherichia fergusonii Becca 0.29 EFB2_01833 Imidazole glycerol phosphate synthase subunit HisH 0.74 EFB2_04865 Dihydroxy-acid dehydratase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_01677 Imidazole glycerol phosphate synthase subunit HisH 0.74 OHPLBJKB_04282 Dihydroxy-acid dehydratase low > 73
Escherichia coli BL21 0.28 ECD_01925 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.74 ECD_03649 dihydroxyacid dehydratase low > 60
Escherichia coli ECOR27 0.28 NOLOHH_15815 hisH imidazole glycerol phosphate synthase subunit HisH 0.74 NOLOHH_06775 ilvD dihydroxy-acid dehydratase low > 57
Lysobacter sp. OAE881 0.28 ABIE51_RS13310 imidazole glycerol phosphate synthase subunit HisH 0.27 ABIE51_RS17540 dihydroxy-acid dehydratase 0.50 57
Escherichia coli ECRC102 0.28 NIAGMN_22445 hisH imidazole glycerol phosphate synthase subunit HisH 0.74 NIAGMN_12395 ilvD dihydroxy-acid dehydratase
Bifidobacterium breve UCC2003 0.28 BBR_RS17035 imidazole glycerol phosphate synthase subunit HisH 0.56 BBR_RS17635 dihydroxy-acid dehydratase 0.31 31

Not shown: 1 genomes with orthologs for PP_0290 only; 0 genomes with orthologs for PP_5128 only