Conservation of cofitness between PP_5128 and PP_4680 in Pseudomonas putida KT2440

101 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5128 Dihydroxy-acid dehydratase 1.0 PP_4680 acetohydroxybutanoate synthase / acetolactate synthase 0.96 2
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_08345 dihydroxy-acid dehydratase 0.89 AO353_14495 acetolactate synthase 3 catalytic subunit 0.89 24
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.88 PfGW456L13_1538 Acetolactate synthase large subunit (EC 2.2.1.6) 0.87 16
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_13250 dihydroxy-acid dehydratase 0.89 AO356_16170 acetolactate synthase 3 catalytic subunit 0.97 4
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.89 Pf6N2E2_5175 Acetolactate synthase large subunit (EC 2.2.1.6) 0.95 9
Pseudomonas simiae WCS417 0.96 PS417_26890 dihydroxy-acid dehydratase 0.89 PS417_23810 acetolactate synthase 3 catalytic subunit 0.94 2
Pseudomonas sp. RS175 0.96 PFR28_04278 Dihydroxy-acid dehydratase 0.90 PFR28_03699 Acetolactate synthase isozyme 3 large subunit 0.73 12
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.88 Pf1N1B4_2878 Acetolactate synthase large subunit (EC 2.2.1.6) 0.93 9
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS28535 dihydroxy-acid dehydratase 0.89 PFLU_RS25650 acetolactate synthase 3 large subunit
Pseudomonas fluorescens SBW25 0.96 PFLU_RS28535 dihydroxy-acid dehydratase 0.89 PFLU_RS25650 acetolactate synthase 3 large subunit
Pseudomonas syringae pv. syringae B728a ΔmexB 0.94 Psyr_0469 dihydroxyacid dehydratase 0.90 Psyr_0846 acetolactate synthase, large subunit 0.89 20
Pseudomonas syringae pv. syringae B728a 0.94 Psyr_0469 dihydroxyacid dehydratase 0.90 Psyr_0846 acetolactate synthase, large subunit 0.97 1
Pseudomonas stutzeri RCH2 0.94 Psest_0234 dihydroxy-acid dehydratase 0.88 Psest_1036 acetolactate synthase, large subunit, biosynthetic type
Pseudomonas sp. S08-1 0.93 OH686_14100 dihydroxy-acid dehydratase 0.88 OH686_08130 acetolactate synthase, large subunit, biosynthetic type 0.93 2
Xanthomonas campestris pv. campestris strain 8004 0.87 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.35 Xcc-8004.1059.1 Acetolactate synthase large subunit (EC 2.2.1.6) 0.93 5
Ralstonia sp. UNC404CL21Col 0.81 ABZR87_RS00240 dihydroxy-acid dehydratase 0.62 ABZR87_RS14955 acetolactate synthase 3 catalytic subunit low > 80
Acidovorax sp. GW101-3H11 0.80 Ac3H11_955 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.59 Ac3H11_525 Acetolactate synthase large subunit (EC 2.2.1.6) 0.78 6
Paraburkholderia graminis OAS925 0.80 ABIE53_006513 dihydroxy-acid dehydratase 0.59 ABIE53_001574 acetolactate synthase-1/2/3 large subunit
Paraburkholderia bryophila 376MFSha3.1 0.80 H281DRAFT_05312 dihydroxyacid dehydratase 0.61 H281DRAFT_04551 acetolactate synthase, large subunit
Paraburkholderia sabiae LMG 24235 0.80 QEN71_RS21095 dihydroxy-acid dehydratase 0.59 QEN71_RS24225 acetolactate synthase 3 catalytic subunit low > 153
Marinobacter adhaerens HP15 0.78 HP15_595 dihydroxy-acid dehydratase 0.75 HP15_531 acetolactate synthase, large subunit, biosynthetic type 0.64 35
Alteromonas macleodii MIT1002 0.78 MIT1002_04041 Dihydroxy-acid dehydratase 0.65 MIT1002_00503 Acetolactate synthase isozyme 3 large subunit 0.99 4
Sinorhizobium meliloti 1021 0.77 SMc04045 dihydroxy-acid dehydratase 0.49 SMc01431 acetolactate synthase 3 catalytic subunit 0.99 1
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_00140 dihydroxy-acid dehydratase 0.66 CSW01_12565 acetolactate synthase 3 large subunit low > 62
Agrobacterium fabrum C58 0.76 Atu1918 dihydroxy-acid dehydratase 0.49 Atu2036 acetolactate synthase III, large subunit
Rhizobium sp. OAE497 0.76 ABIE40_RS08005 dihydroxy-acid dehydratase 0.49 ABIE40_RS11495 acetolactate synthase 3 large subunit 0.94 3
Azospirillum brasilense Sp245 0.75 AZOBR_RS15015 dihydroxy-acid dehydratase 0.50 AZOBR_RS06560 acetolactate synthase 0.36 57
Dechlorosoma suillum PS 0.75 Dsui_1122 dihydroxy-acid dehydratase 0.60 Dsui_3529 acetolactate synthase, large subunit, biosynthetic type
Escherichia coli Nissle 1917 0.74 ECOLIN_RS21665 dihydroxy-acid dehydratase 0.67 ECOLIN_RS00415 acetolactate synthase 3 large subunit low > 52
Shewanella sp. ANA-3 0.74 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) 0.69 Shewana3_2269 acetolactate synthase 3 catalytic subunit (RefSeq) low > 73
Escherichia fergusonii Becca 0.74 EFB2_04865 Dihydroxy-acid dehydratase 0.67 EFB2_03969 Acetolactate synthase isozyme 3 large subunit 0.33 62
Escherichia coli BW25113 0.74 b3771 ilvD dihydroxy-acid dehydratase (NCBI) 0.67 b0077 ilvI acetolactate synthase III large subunit (NCBI) low > 76
Shewanella oneidensis MR-1 0.74 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) 0.70 SO2279 ilvI acetolactate synthase III, large subunit (NCBI ptt file) low > 76
Escherichia coli ECRC102 0.74 NIAGMN_12395 ilvD dihydroxy-acid dehydratase 0.67 NIAGMN_08550 ilvI acetolactate synthase 3 large subunit
Escherichia coli ECRC101 0.74 MCAODC_05145 ilvD dihydroxy-acid dehydratase 0.67 MCAODC_01215 ilvI acetolactate synthase 3 large subunit
Escherichia coli ECRC99 0.74 KEDOAH_13510 ilvD dihydroxy-acid dehydratase 0.67 KEDOAH_17455 ilvI acetolactate synthase 3 large subunit
Rhodopseudomonas palustris CGA009 0.74 TX73_007515 dihydroxy-acid dehydratase 0.48 TX73_010465 acetolactate synthase 3 large subunit
Escherichia coli ECRC98 0.74 JDDGAC_18260 ilvD dihydroxy-acid dehydratase 0.67 JDDGAC_14295 ilvI acetolactate synthase 3 large subunit
Escherichia coli ECRC101 0.74 OKFHMN_14640 ilvD dihydroxy-acid dehydratase 0.67 OKFHMN_10700 ilvI acetolactate synthase 3 large subunit
Escherichia coli ECRC62 0.74 BNILDI_04750 ilvD dihydroxy-acid dehydratase 0.67 BNILDI_08565 ilvI acetolactate synthase 3 large subunit
Escherichia coli ECOR27 0.74 NOLOHH_06775 ilvD dihydroxy-acid dehydratase 0.67 NOLOHH_03045 ilvI acetolactate synthase 3 large subunit low > 57
Shewanella amazonensis SB2B 0.74 Sama_3279 dihydroxy-acid dehydratase (RefSeq) 0.70 Sama_2018 acetolactate synthase 3 catalytic subunit (RefSeq) low > 62
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_04282 Dihydroxy-acid dehydratase 0.67 OHPLBJKB_03581 Acetolactate synthase isozyme 3 large subunit low > 73
Escherichia coli BL21 0.74 ECD_03649 dihydroxyacid dehydratase 0.67 ECD_00079 acetolactate synthase 3 large subunit low > 60
Escherichia coli ECOR38 0.74 HEPCGN_13350 ilvD dihydroxy-acid dehydratase 0.67 HEPCGN_08680 ilvI acetolactate synthase 3 large subunit low > 85
Synechococcus elongatus PCC 7942 0.74 Synpcc7942_0626 ilvD dihydroxy-acid dehydratase 0.45 Synpcc7942_0139 ilvB acetolactate synthase 3 catalytic subunit
Shewanella loihica PV-4 0.74 Shew_0292 dihydroxy-acid dehydratase (RefSeq) 0.67 Shew_1776 acetolactate synthase 3 catalytic subunit (RefSeq) low > 60
Klebsiella michiganensis M5al 0.74 BWI76_RS00975 dihydroxy-acid dehydratase 0.65 BWI76_RS04695 acetolactate synthase 3 large subunit low > 92
Azospirillum sp. SherDot2 0.73 MPMX19_05356 Dihydroxy-acid dehydratase 0.51 MPMX19_01776 Acetolactate synthase isozyme 3 large subunit
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.63 GFF161 Acetolactate synthase large subunit (EC 2.2.1.6) low > 78
Phaeobacter inhibens DSM 17395 0.73 PGA1_c29490 dihydroxy-acid dehydratase LivD 0.46 PGA1_c20210 acetolactate synthase isozyme 3 large subunit 0.94 1
Enterobacter sp. TBS_079 0.73 MPMX20_04499 Dihydroxy-acid dehydratase 0.66 MPMX20_00771 Acetolactate synthase isozyme 3 large subunit low > 85
Pectobacterium carotovorum WPP14 0.73 HER17_RS01075 dihydroxy-acid dehydratase 0.69 HER17_RS03095 acetolactate synthase 3 large subunit low > 75
Pantoea sp. MT58 0.73 IAI47_01035 dihydroxy-acid dehydratase 0.67 IAI47_15990 acetolactate synthase 3 large subunit low > 76
Dickeya dadantii 3937 0.73 DDA3937_RS20155 dihydroxy-acid dehydratase 0.69 DDA3937_RS18105 acetolactate synthase 3 large subunit low > 74
Dickeya dianthicola 67-19 0.73 HGI48_RS20295 dihydroxy-acid dehydratase 0.68 HGI48_RS18040 acetolactate synthase 3 large subunit low > 71
Enterobacter asburiae PDN3 0.73 EX28DRAFT_4443 dihydroxy-acid dehydratase 0.66 EX28DRAFT_3673 acetolactate synthase, large subunit (EC 2.2.1.6) low > 76
Dickeya dianthicola ME23 0.72 DZA65_RS21335 dihydroxy-acid dehydratase 0.68 DZA65_RS19185 acetolactate synthase 3 large subunit low > 75
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS02650 dihydroxy-acid dehydratase 0.59 HSERO_RS08650 acetolactate synthase 0.96 3
Caulobacter crescentus NA1000 0.72 CCNA_03139 dihydroxy-acid dehydratase 0.52 CCNA_02185 acetolactate synthase large subunit 0.97 9
Caulobacter crescentus NA1000 Δfur 0.72 CCNA_03139 dihydroxy-acid dehydratase 0.52 CCNA_02185 acetolactate synthase large subunit low > 67
Erwinia tracheiphila SCR3 0.72 LU632_RS24400 ilvD dihydroxy-acid dehydratase 0.68 LU632_RS02885 ilvI acetolactate synthase 3 large subunit low > 74
Serratia liquefaciens MT49 0.72 IAI46_24345 dihydroxy-acid dehydratase 0.69 IAI46_03375 acetolactate synthase 3 large subunit low > 86
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS10100 dihydroxy-acid dehydratase 0.60 BPHYT_RS06545 acetolactate synthase 0.81 11
Rhodospirillum rubrum S1H 0.70 Rru_A1786 Dihydroxy-acid dehydratase (NCBI) 0.49 Rru_A0467 Acetolactate synthase, large subunit, biosynthetic type (NCBI) 0.93 13
Magnetospirillum magneticum AMB-1 0.70 AMB_RS12770 dihydroxy-acid dehydratase 0.48 AMB_RS17740 acetolactate synthase 3 large subunit
Castellaniella sp019104865 MT123 0.70 ABCV34_RS14810 dihydroxy-acid dehydratase 0.59 ABCV34_RS01210 acetolactate synthase 3 catalytic subunit low > 48
Rahnella sp. WP5 0.69 EX31_RS15005 dihydroxy-acid dehydratase 0.69 EX31_RS03665 acetolactate synthase 3 large subunit low > 89
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF2073 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.61 GFF4276 Acetolactate synthase large subunit (EC 2.2.1.6)
Parabacteroides merdae CL09T00C40 0.63 HMPREF1078_RS16695 dihydroxy-acid dehydratase 0.37 HMPREF1078_RS16690 biosynthetic-type acetolactate synthase large subunit 0.98 2
Phocaeicola vulgatus CL09T03C04 0.62 HMPREF1058_RS16815 dihydroxy-acid dehydratase 0.36 HMPREF1058_RS16820 biosynthetic-type acetolactate synthase large subunit 0.99 1
Phocaeicola dorei CL03T12C01 0.62 ABI39_RS12715 dihydroxy-acid dehydratase 0.36 ABI39_RS12720 biosynthetic-type acetolactate synthase large subunit 0.95 1
Bacteroides stercoris CC31F 0.62 HMPREF1181_RS08335 dihydroxy-acid dehydratase 0.37 HMPREF1181_RS08330 biosynthetic-type acetolactate synthase large subunit 0.99 1
Bacteroides thetaiotaomicron VPI-5482 0.61 BT2078 dihydroxy-acid dehydratase (NCBI ptt file) 0.37 BT2077 acetolactate synthase large subunit (NCBI ptt file) 0.97 1
Bacteroides ovatus ATCC 8483 0.60 BACOVA_03302 dihydroxy-acid dehydratase 0.36 BACOVA_03303 acetolactate synthase, large subunit, biosynthetic type 0.98 1
Bifidobacterium breve UCC2003 0.56 BBR_RS17635 dihydroxy-acid dehydratase 0.38 BBR_RS12350 acetolactate synthase large subunit 0.85 2
Desulfovibrio vulgaris Miyazaki F 0.37 DvMF_2034 dihydroxy-acid dehydratase (RefSeq) 0.51 DvMF_0153 acetolactate synthase, large subunit, biosynthetic type (RefSeq) 0.94 1
Desulfovibrio vulgaris Hildenborough JW710 0.37 DVU3373 ilvD dihydroxy-acid dehydratase (TIGR) 0.50 DVU1376 ilvB-2 acetolactate synthase, large subunit, biosynthetic type (TIGR) 0.96 2
Methanococcus maripaludis JJ 0.33 MMJJ_RS03675 dihydroxy-acid dehydratase 0.39 MMJJ_RS01650 acetolactate synthase large subunit
Methanococcus maripaludis S2 0.33 MMP_RS01700 dihydroxy-acid dehydratase 0.39 MMP_RS03415 acetolactate synthase large subunit
Mycobacterium tuberculosis H37Rv 0.32 Rv0189c Probable dihydroxy-acid dehydratase IlvD (dad) 0.44 Rv3003c Acetolactate synthase (large subunit) IlvB1 (acetohydroxy-acid synthase)
Variovorax sp. OAS795 0.31 ABID97_RS17500 dihydroxy-acid dehydratase 0.59 ABID97_RS14885 acetolactate synthase 3 catalytic subunit
Variovorax sp. SCN45 0.31 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.59 GFF1158 Acetolactate synthase large subunit (EC 2.2.1.6)
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS16210 dihydroxy-acid dehydratase 0.61 RR42_RS05435 acetolactate synthase 3 catalytic subunit
Ralstonia solanacearum GMI1000 0.30 RS_RS12105 dihydroxy-acid dehydratase 0.62 RS_RS10420 acetolactate synthase 3 large subunit
Bosea sp. OAE506 0.30 ABIE41_RS15690 dihydroxy-acid dehydratase 0.51 ABIE41_RS12890 acetolactate synthase 3 large subunit
Ralstonia solanacearum PSI07 0.30 RPSI07_RS12840 dihydroxy-acid dehydratase 0.62 RPSI07_RS14255 acetolactate synthase, large subunit, biosynthetic type
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS04535 dihydroxy-acid dehydratase 0.62 RALBFv3_RS03050 acetolactate synthase 3 large subunit
Ralstonia solanacearum UW163 0.29 UW163_RS09135 dihydroxy-acid dehydratase 0.62 UW163_RS10675 acetolactate synthase 3 large subunit
Dinoroseobacter shibae DFL-12 0.29 Dshi_0129 dihydroxy-acid dehydratase (RefSeq) 0.49 Dshi_1779 acetolactate synthase, large subunit, biosynthetic type (RefSeq)
Acinetobacter radioresistens SK82 0.28 MPMX26_03019 Dihydroxy-acid dehydratase 0.70 MPMX26_00472 Acetolactate synthase isozyme 3 large subunit 0.95 1
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_4216 Dihydroxyacid dehydratase/phosphogluconate dehydratase 0.48 Ga0059261_0068 acetolactate synthase, large subunit (EC 2.2.1.6) 0.99 7
Echinicola vietnamensis KMM 6221, DSM 17526 0.28 Echvi_2055 dihydroxy-acid dehydratase 0.36 Echvi_2056 acetolactate synthase, large subunit, biosynthetic type 0.98 2
Lysobacter sp. OAE881 0.27 ABIE51_RS17540 dihydroxy-acid dehydratase 0.37 ABIE51_RS17550 acetolactate synthase 2 catalytic subunit 0.96 29
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS15945 dihydroxy-acid dehydratase 0.34 ABZR86_RS15935 biosynthetic-type acetolactate synthase large subunit 0.96 2
Pontibacter actiniarum KMM 6156, DSM 19842 0.27 CA264_06935 dihydroxy-acid dehydratase 0.37 CA264_06930 acetolactate synthase, large subunit, biosynthetic type low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.27 CA265_RS15795 dihydroxy-acid dehydratase 0.37 CA265_RS15805 acetolactate synthase, large subunit, biosynthetic type 0.97 2
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS11575 dihydroxy-acid dehydratase 0.36 ABZR88_RS11580 biosynthetic-type acetolactate synthase large subunit 0.85 6
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_13600 ilvD dihydroxy-acid dehydratase 0.31 OKGIIK_13610 ilvB biosynthetic-type acetolactate synthase large subunit 0.61 22
Brevundimonas sp. GW460-12-10-14-LB2 0.25 A4249_RS10030 dihydroxy-acid dehydratase 0.35 A4249_RS10020 acetolactate synthase 2 catalytic subunit 0.99 14
Rhodanobacter denitrificans MT42 0.25 LRK55_RS09960 dihydroxy-acid dehydratase 0.32 LRK55_RS09950 biosynthetic-type acetolactate synthase large subunit low > 63
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS10320 dihydroxy-acid dehydratase 0.32 LRK54_RS10310 biosynthetic-type acetolactate synthase large subunit 0.92 3

Not shown: 0 genomes with orthologs for PP_5128 only; 0 genomes with orthologs for PP_4680 only