Conservation of cofitness between PP_4680 and PP_1088 in Pseudomonas putida KT2440

101 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4680 acetohydroxybutanoate synthase / acetolactate synthase 1.0 PP_1088 Argininosuccinate synthase 0.89 20
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_0846 acetolactate synthase, large subunit 0.95 Psyr_3892 argininosuccinate synthase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_0846 acetolactate synthase, large subunit 0.95 Psyr_3892 argininosuccinate synthase
Pseudomonas sp. RS175 0.90 PFR28_03699 Acetolactate synthase isozyme 3 large subunit 0.96 PFR28_03353 Argininosuccinate synthase
Pseudomonas simiae WCS417 0.89 PS417_23810 acetolactate synthase 3 catalytic subunit 0.96 PS417_05640 argininosuccinate synthase
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_16170 acetolactate synthase 3 catalytic subunit 0.95 AO356_18325 argininosuccinate synthase 0.94 14
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_14495 acetolactate synthase 3 catalytic subunit 0.95 AO353_04105 argininosuccinate synthase 0.89 3
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_5175 Acetolactate synthase large subunit (EC 2.2.1.6) 0.95 Pf6N2E2_5590 Argininosuccinate synthase (EC 6.3.4.5)
Pseudomonas fluorescens SBW25 0.89 PFLU_RS25650 acetolactate synthase 3 large subunit 0.96 PFLU_RS05725 argininosuccinate synthase
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS25650 acetolactate synthase 3 large subunit 0.96 PFLU_RS05725 argininosuccinate synthase
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_2878 Acetolactate synthase large subunit (EC 2.2.1.6) 0.96 Pf1N1B4_742 Argininosuccinate synthase (EC 6.3.4.5) 0.82 27
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_1538 Acetolactate synthase large subunit (EC 2.2.1.6) 0.96 PfGW456L13_1749 Argininosuccinate synthase (EC 6.3.4.5) 0.89 27
Pseudomonas stutzeri RCH2 0.88 Psest_1036 acetolactate synthase, large subunit, biosynthetic type 0.95 Psest_3121 argininosuccinate synthase
Pseudomonas sp. S08-1 0.88 OH686_08130 acetolactate synthase, large subunit, biosynthetic type 0.95 OH686_03930 argininosuccinate synthase 0.71 34
Marinobacter adhaerens HP15 0.75 HP15_531 acetolactate synthase, large subunit, biosynthetic type 0.82 HP15_2367 argininosuccinate synthase
Acinetobacter radioresistens SK82 0.70 MPMX26_00472 Acetolactate synthase isozyme 3 large subunit 0.14 MPMX26_02260 Argininosuccinate synthase 0.88 34
Shewanella oneidensis MR-1 0.70 SO2279 ilvI acetolactate synthase III, large subunit (NCBI ptt file) 0.46 SO0278 argG argininosuccinate synthase (NCBI ptt file) 0.71 52
Shewanella amazonensis SB2B 0.70 Sama_2018 acetolactate synthase 3 catalytic subunit (RefSeq) 0.46 Sama_0259 argininosuccinate synthase (RefSeq) 0.65 42
Shewanella sp. ANA-3 0.69 Shewana3_2269 acetolactate synthase 3 catalytic subunit (RefSeq) 0.46 Shewana3_3902 argininosuccinate synthase (RefSeq) 0.78 52
Rahnella sp. WP5 0.69 EX31_RS03665 acetolactate synthase 3 large subunit 0.15 EX31_RS13445 argininosuccinate synthase 0.62 77
Pectobacterium carotovorum WPP14 0.69 HER17_RS03095 acetolactate synthase 3 large subunit 0.14 HER17_RS21055 argininosuccinate synthase low > 75
Dickeya dadantii 3937 0.69 DDA3937_RS18105 acetolactate synthase 3 large subunit 0.14 DDA3937_RS20890 argininosuccinate synthase low > 74
Serratia liquefaciens MT49 0.69 IAI46_03375 acetolactate synthase 3 large subunit 0.48 IAI46_24505 argininosuccinate synthase low > 86
Erwinia tracheiphila SCR3 0.68 LU632_RS02885 ilvI acetolactate synthase 3 large subunit 0.47 LU632_RS19605 argininosuccinate synthase 0.58 5
Dickeya dianthicola 67-19 0.68 HGI48_RS18040 acetolactate synthase 3 large subunit 0.14 HGI48_RS00355 argininosuccinate synthase low > 71
Dickeya dianthicola ME23 0.68 DZA65_RS19185 acetolactate synthase 3 large subunit 0.14 DZA65_RS00355 argininosuccinate synthase low > 75
Escherichia coli ECOR27 0.67 NOLOHH_03045 ilvI acetolactate synthase 3 large subunit 0.13 NOLOHH_09890 argG argininosuccinate synthase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_03581 Acetolactate synthase isozyme 3 large subunit 0.13 OHPLBJKB_00528 Argininosuccinate synthase low > 73
Escherichia coli BL21 0.67 ECD_00079 acetolactate synthase 3 large subunit 0.13 ECD_03038 argininosuccinate synthetase low > 60
Pantoea sp. MT58 0.67 IAI47_15990 acetolactate synthase 3 large subunit 0.46 IAI47_00915 argininosuccinate synthase 0.70 9
Escherichia coli Nissle 1917 0.67 ECOLIN_RS00415 acetolactate synthase 3 large subunit 0.13 ECOLIN_RS18275 argininosuccinate synthase low > 52
Escherichia coli ECRC62 0.67 BNILDI_08565 ilvI acetolactate synthase 3 large subunit 0.13 BNILDI_01645 argG argininosuccinate synthase
Escherichia coli ECOR38 0.67 HEPCGN_08680 ilvI acetolactate synthase 3 large subunit 0.13 HEPCGN_16965 argG argininosuccinate synthase low > 85
Escherichia fergusonii Becca 0.67 EFB2_03969 Acetolactate synthase isozyme 3 large subunit 0.13 EFB2_00651 Argininosuccinate synthase low > 86
Escherichia coli BW25113 0.67 b0077 ilvI acetolactate synthase III large subunit (NCBI) 0.13 b3172 argG argininosuccinate synthase (NCBI) 0.71 43
Shewanella loihica PV-4 0.67 Shew_1776 acetolactate synthase 3 catalytic subunit (RefSeq) 0.48 Shew_0205 argininosuccinate synthase (RefSeq) 0.71 25
Escherichia coli ECRC99 0.67 KEDOAH_17455 ilvI acetolactate synthase 3 large subunit 0.13 KEDOAH_10060 argG argininosuccinate synthase
Escherichia coli ECRC101 0.67 OKFHMN_10700 ilvI acetolactate synthase 3 large subunit 0.13 OKFHMN_18090 argG argininosuccinate synthase
Escherichia coli ECRC98 0.67 JDDGAC_14295 ilvI acetolactate synthase 3 large subunit 0.13 JDDGAC_21715 argG argininosuccinate synthase
Escherichia coli ECRC102 0.67 NIAGMN_08550 ilvI acetolactate synthase 3 large subunit 0.13 NIAGMN_15850 argG argininosuccinate synthase
Escherichia coli ECRC101 0.67 MCAODC_01215 ilvI acetolactate synthase 3 large subunit 0.13 MCAODC_08610 argG argininosuccinate synthase
Enterobacter asburiae PDN3 0.66 EX28DRAFT_3673 acetolactate synthase, large subunit (EC 2.2.1.6) 0.14 EX28DRAFT_3224 argininosuccinate synthase (EC 6.3.4.5) low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_00771 Acetolactate synthase isozyme 3 large subunit 0.14 MPMX20_04077 Argininosuccinate synthase low > 85
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_12565 acetolactate synthase 3 large subunit 0.48 CSW01_13370 argininosuccinate synthase low > 62
Alteromonas macleodii MIT1002 0.65 MIT1002_00503 Acetolactate synthase isozyme 3 large subunit 0.48 MIT1002_00468 Argininosuccinate synthase 0.96 33
Klebsiella michiganensis M5al 0.65 BWI76_RS04695 acetolactate synthase 3 large subunit 0.14 BWI76_RS25115 argininosuccinate synthase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF161 Acetolactate synthase large subunit (EC 2.2.1.6) 0.13 GFF2913 Argininosuccinate synthase (EC 6.3.4.5) 0.38 55
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS14955 acetolactate synthase 3 catalytic subunit 0.14 ABZR87_RS00835 argininosuccinate synthase 0.95 2
Ralstonia solanacearum PSI07 0.62 RPSI07_RS14255 acetolactate synthase, large subunit, biosynthetic type 0.14 RPSI07_RS12120 argininosuccinate synthase
Ralstonia solanacearum UW163 0.62 UW163_RS10675 acetolactate synthase 3 large subunit 0.14 UW163_RS08445 argininosuccinate synthase
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS03050 acetolactate synthase 3 large subunit 0.14 RALBFv3_RS05180 argininosuccinate synthase
Ralstonia solanacearum GMI1000 0.62 RS_RS10420 acetolactate synthase 3 large subunit 0.14 RS_RS12800 argininosuccinate synthase
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS05435 acetolactate synthase 3 catalytic subunit 0.77 RR42_RS17170 argininosuccinate synthase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF4276 Acetolactate synthase large subunit (EC 2.2.1.6) 0.13 GFF294 Argininosuccinate synthase (EC 6.3.4.5)
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_04551 acetolactate synthase, large subunit 0.76 H281DRAFT_04120 argininosuccinate synthase
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS06545 acetolactate synthase 0.76 BPHYT_RS15920 argininosuccinate synthase 0.95 5
Dechlorosoma suillum PS 0.60 Dsui_3529 acetolactate synthase, large subunit, biosynthetic type 0.79 Dsui_3248 argininosuccinate synthase
Paraburkholderia graminis OAS925 0.59 ABIE53_001574 acetolactate synthase-1/2/3 large subunit 0.76 ABIE53_003355 argininosuccinate synthase
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS08650 acetolactate synthase 0.14 HSERO_RS07180 argininosuccinate synthase
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS24225 acetolactate synthase 3 catalytic subunit 0.14 QEN71_RS09235 argininosuccinate synthase 0.96 13
Variovorax sp. SCN45 0.59 GFF1158 Acetolactate synthase large subunit (EC 2.2.1.6) 0.14 GFF3096 Argininosuccinate synthase (EC 6.3.4.5)
Acidovorax sp. GW101-3H11 0.59 Ac3H11_525 Acetolactate synthase large subunit (EC 2.2.1.6) 0.14 Ac3H11_2616 Argininosuccinate synthase (EC 6.3.4.5)
Castellaniella sp019104865 MT123 0.59 ABCV34_RS01210 acetolactate synthase 3 catalytic subunit 0.14 ABCV34_RS05390 argininosuccinate synthase
Variovorax sp. OAS795 0.59 ABID97_RS14885 acetolactate synthase 3 catalytic subunit 0.14 ABID97_RS21670 argininosuccinate synthase
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_02185 acetolactate synthase large subunit 0.67 CCNA_00128 argininosuccinate synthase low > 67
Caulobacter crescentus NA1000 0.52 CCNA_02185 acetolactate synthase large subunit 0.67 CCNA_00128 argininosuccinate synthase
Bosea sp. OAE506 0.51 ABIE41_RS12890 acetolactate synthase 3 large subunit 0.67 ABIE41_RS00340 argininosuccinate synthase
Azospirillum sp. SherDot2 0.51 MPMX19_01776 Acetolactate synthase isozyme 3 large subunit 0.72 MPMX19_02369 Argininosuccinate synthase
Desulfovibrio vulgaris Miyazaki F 0.51 DvMF_0153 acetolactate synthase, large subunit, biosynthetic type (RefSeq) 0.57 DvMF_0047 argininosuccinate synthase (RefSeq) 0.92 3
Azospirillum brasilense Sp245 0.50 AZOBR_RS06560 acetolactate synthase 0.73 AZOBR_RS00785 argininosuccinate synthase
Desulfovibrio vulgaris Hildenborough JW710 0.50 DVU1376 ilvB-2 acetolactate synthase, large subunit, biosynthetic type (TIGR) 0.58 DVU1095 argG argininosuccinate synthase (TIGR) 0.82 20
Rhodospirillum rubrum S1H 0.49 Rru_A0467 Acetolactate synthase, large subunit, biosynthetic type (NCBI) 0.72 Rru_A3751 Argininosuccinate synthase (NCBI) 0.93 8
Rhizobium sp. OAE497 0.49 ABIE40_RS11495 acetolactate synthase 3 large subunit 0.68 ABIE40_RS18150 argininosuccinate synthase
Agrobacterium fabrum C58 0.49 Atu2036 acetolactate synthase III, large subunit 0.68 Atu2667 argininosuccinate synthase
Sinorhizobium meliloti 1021 0.49 SMc01431 acetolactate synthase 3 catalytic subunit 0.68 SMc03826 argininosuccinate synthase 0.79 70
Dinoroseobacter shibae DFL-12 0.49 Dshi_1779 acetolactate synthase, large subunit, biosynthetic type (RefSeq) 0.69 Dshi_3472 Argininosuccinate synthase (RefSeq)
Magnetospirillum magneticum AMB-1 0.48 AMB_RS17740 acetolactate synthase 3 large subunit 0.71 AMB_RS05720 argininosuccinate synthase
Sphingomonas koreensis DSMZ 15582 0.48 Ga0059261_0068 acetolactate synthase, large subunit (EC 2.2.1.6) 0.66 Ga0059261_1393 argininosuccinate synthase (EC 6.3.4.5) 0.99 1
Rhodopseudomonas palustris CGA009 0.48 TX73_010465 acetolactate synthase 3 large subunit 0.14 TX73_002040 argininosuccinate synthase
Phaeobacter inhibens DSM 17395 0.46 PGA1_c20210 acetolactate synthase isozyme 3 large subunit 0.67 PGA1_c34920 argininosuccinate synthase ArgG
Synechococcus elongatus PCC 7942 0.45 Synpcc7942_0139 ilvB acetolactate synthase 3 catalytic subunit 0.42 Synpcc7942_0009 argG argininosuccinate synthase
Mycobacterium tuberculosis H37Rv 0.44 Rv3003c Acetolactate synthase (large subunit) IlvB1 (acetohydroxy-acid synthase) 0.36 Rv1658 Probable argininosuccinate synthase ArgG
Methanococcus maripaludis JJ 0.39 MMJJ_RS01650 acetolactate synthase large subunit 0.37 MMJJ_RS05060 argininosuccinate synthase
Methanococcus maripaludis S2 0.39 MMP_RS03415 acetolactate synthase large subunit 0.39 MMP_RS00425 argininosuccinate synthase
Bifidobacterium breve UCC2003 0.38 BBR_RS12350 acetolactate synthase large subunit 0.37 BBR_RS13915 argininosuccinate synthase low > 34
Bacteroides stercoris CC31F 0.37 HMPREF1181_RS08330 biosynthetic-type acetolactate synthase large subunit 0.21 HMPREF1181_RS03460 argininosuccinate synthase 0.86 27
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS15805 acetolactate synthase, large subunit, biosynthetic type 0.20 CA265_RS18545 argininosuccinate synthase 0.95 7
Parabacteroides merdae CL09T00C40 0.37 HMPREF1078_RS16690 biosynthetic-type acetolactate synthase large subunit 0.20 HMPREF1078_RS10575 argininosuccinate synthase 0.88 16
Lysobacter sp. OAE881 0.37 ABIE51_RS17550 acetolactate synthase 2 catalytic subunit 0.21 ABIE51_RS13405 argininosuccinate synthase 0.96 11
Pontibacter actiniarum KMM 6156, DSM 19842 0.37 CA264_06930 acetolactate synthase, large subunit, biosynthetic type 0.18 CA264_06255 argininosuccinate synthase low > 74
Bacteroides thetaiotaomicron VPI-5482 0.37 BT2077 acetolactate synthase large subunit (NCBI ptt file) 0.21 BT3760 arginosuccinate synthetase (EC 6.3.4.5) (from data) 0.91 17
Echinicola vietnamensis KMM 6221, DSM 17526 0.36 Echvi_2056 acetolactate synthase, large subunit, biosynthetic type 0.18 Echvi_3846 argininosuccinate synthase 0.94 16
Bacteroides ovatus ATCC 8483 0.36 BACOVA_03303 acetolactate synthase, large subunit, biosynthetic type 0.21 BACOVA_03590 putative argininosuccinate synthase 0.94 30
Mucilaginibacter yixingensis YX-36 DSM 26809 0.36 ABZR88_RS11580 biosynthetic-type acetolactate synthase large subunit 0.20 ABZR88_RS15515 argininosuccinate synthase
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS16820 biosynthetic-type acetolactate synthase large subunit 0.21 HMPREF1058_RS08845 argininosuccinate synthase 0.72 54
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS12720 biosynthetic-type acetolactate synthase large subunit 0.20 ABI39_RS02975 argininosuccinate synthase 0.79 47
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS10020 acetolactate synthase 2 catalytic subunit 0.67 A4249_RS14275 argininosuccinate synthase 0.99 20
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.1059.1 Acetolactate synthase large subunit (EC 2.2.1.6) 0.21 Xcc-8004.2318.1 Argininosuccinate synthase (EC 6.3.4.5) 0.90 15
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS15935 biosynthetic-type acetolactate synthase large subunit 0.21 ABZR86_RS08715 arginosuccinate synthetase (EC 6.3.4.5) (from data) 0.97 9
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS10310 biosynthetic-type acetolactate synthase large subunit 0.21 LRK54_RS02400 argininosuccinate synthase 0.86 10
Rhodanobacter denitrificans MT42 0.32 LRK55_RS09950 biosynthetic-type acetolactate synthase large subunit 0.21 LRK55_RS02155 argininosuccinate synthase low > 63
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_13610 ilvB biosynthetic-type acetolactate synthase large subunit 0.20 OKGIIK_09465 argG argininosuccinate synthase low > 52

Not shown: 0 genomes with orthologs for PP_4680 only; 1 genomes with orthologs for PP_1088 only