Conservation of cofitness between MPMX19_04331 and MPMX19_01601 in Azospirillum sp. SherDot2

106 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Azospirillum sp. SherDot2 1.0 MPMX19_04331 Exodeoxyribonuclease 1.0 MPMX19_01601 DNA repair protein RecN 0.55 11
Azospirillum brasilense Sp245 0.85 AZOBR_RS15540 exodeoxyribonuclease III 0.81 AZOBR_RS12395 DNA repair protein RecN — —
Magnetospirillum magneticum AMB-1 0.63 AMB_RS12755 exodeoxyribonuclease III 0.55 AMB_RS19520 DNA repair protein RecN — —
Phaeobacter inhibens DSM 17395 0.57 PGA1_c11070 exodeoxyribonuclease III 0.38 PGA1_c09720 DNA repair protein RecN low > 62
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_02090 exodeoxyribonuclease III 0.39 CCNA_02062 DNA repair protein recN — —
Caulobacter crescentus NA1000 0.56 CCNA_02090 exodeoxyribonuclease III 0.39 CCNA_02062 DNA repair protein recN low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.56 A4249_RS02655 exodeoxyribonuclease III 0.36 A4249_RS02620 DNA repair protein RecN low > 48
Bosea sp. OAE506 0.55 ABIE41_RS15705 exodeoxyribonuclease III 0.43 ABIE41_RS12645 DNA repair protein RecN low > 77
Dinoroseobacter shibae DFL-12 0.54 Dshi_1886 exodeoxyribonuclease III Xth (RefSeq) 0.35 Dshi_2413 DNA repair protein RecN (RefSeq) low > 64
Xanthobacter sp. DMC5 0.54 GFF859 Exodeoxyribonuclease III 0.40 GFF2252 DNA repair protein RecN — —
Rhodospirillum rubrum S1H 0.53 Rru_A1784 exodeoxyribonuclease III xth (NCBI) 0.49 Rru_A0940 DNA repair protein RecN (NCBI) — —
Rhodopseudomonas palustris CGA009 0.52 TX73_014820 exodeoxyribonuclease III 0.44 TX73_018240 DNA repair protein RecN low > 86
Sinorhizobium meliloti 1021 0.51 SMc02077 exodeoxyribonuclease III protein 0.41 SMc01877 DNA repair protein 0.57 3
Sphingomonas koreensis DSMZ 15582 0.51 Ga0059261_3499 exodeoxyribonuclease III 0.44 Ga0059261_1026 DNA repair protein RecN 0.42 5
Mucilaginibacter yixingensis YX-36 DSM 26809 0.51 ABZR88_RS19760 exodeoxyribonuclease III 0.22 ABZR88_RS06580 DNA repair protein RecN low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.50 CA265_RS16670 exodeoxyribonuclease III 0.22 CA265_RS14855 DNA repair protein RecN low > 88
Agrobacterium fabrum C58 0.49 Atu1714 exonuclease III 0.43 Atu2083 DNA repair protein RecN low > 89
Pseudomonas stutzeri RCH2 0.47 Psest_1187 exodeoxyribonuclease III 0.29 Psest_0962 DNA repair protein RecN low > 67
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_03037 Exodeoxyribonuclease III (EC 3.1.11.2) 0.26 H281DRAFT_04692 DNA replication and repair protein RecN low > 103
Lysobacter sp. OAE881 0.47 ABIE51_RS09210 exodeoxyribonuclease III 0.30 ABIE51_RS11655 DNA repair protein RecN low > 62
Paraburkholderia graminis OAS925 0.46 ABIE53_005114 exodeoxyribonuclease-3 0.26 ABIE53_000856 DNA repair protein RecN (Recombination protein N) low > 113
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS29690 exodeoxyribonuclease III 0.25 BPHYT_RS03560 DNA repair protein low > 109
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS09020 exodeoxyribonuclease III 0.27 QEN71_RS26535 DNA repair protein RecN low > 153
Pseudomonas aeruginosa PA14 0.44 IKLFDK_21510 exodeoxyribonuclease III 0.31 IKLFDK_29775 DNA repair protein RecN low > 101
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_2237 Exodeoxyribonuclease III (EC 3.1.11.2) 0.31 Pf6N2E2_3370 DNA repair protein RecN low > 103
Pseudomonas sp. RS175 0.44 PFR28_01207 Exodeoxyribonuclease III 0.30 PFR28_00071 DNA repair protein RecN low > 88
Pseudomonas sp. S08-1 0.44 OH686_23775 exodeoxyribonuclease III 0.31 OH686_17050 DNA repair protein RecN low > 80
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_3967 Exodeoxyribonuclease III (EC 3.1.11.2) 0.31 PfGW456L13_5106 DNA repair protein RecN low > 87
Pseudomonas sp. BP01 0.44 JOY50_RS03075 xth exodeoxyribonuclease III 0.29 JOY50_RS26735 recN DNA repair protein RecN — —
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_01850 exodeoxyribonuclease III 0.30 AO356_07510 DNA repair protein RecN low > 104
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_38 Exodeoxyribonuclease III (EC 3.1.11.2) 0.30 Pf1N1B4_1178 DNA repair protein RecN low > 87
Pseudomonas putida KT2440 0.43 PP_2707 putative Exodeoxyribonuclease III 0.28 PP_4729 factor used in recombination and DNA repair low > 96
Pseudomonas sp. DMC3 0.42 GFF767 Exodeoxyribonuclease III 0.30 GFF4971 DNA repair protein RecN low > 89
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS15630 exodeoxyribonuclease III 0.29 HSERO_RS03060 DNA repair protein low > 78
Methylophilus sp. DMC18 0.41 GFF1517 Exodeoxyribonuclease III 0.29 GFF306 DNA repair protein RecN low > 43
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS13495 exodeoxyribonuclease III 0.28 ABZR87_RS01065 DNA repair protein RecN low > 80
Ralstonia solanacearum GMI1000 0.40 RS_RS08025 exodeoxyribonuclease III 0.29 RS_RS13275 DNA repair protein RecN low > 80
Variovorax sp. SCN45 0.39 GFF3064 Exodeoxyribonuclease III (EC 3.1.11.2) 0.27 GFF2357 DNA repair protein RecN low > 127
Ralstonia solanacearum UW163 0.39 UW163_RS15010 exodeoxyribonuclease III 0.28 UW163_RS08210 DNA repair protein RecN — —
Ralstonia solanacearum IBSBF1503 0.39 RALBFv3_RS01700 exodeoxyribonuclease III 0.28 RALBFv3_RS05415 DNA repair protein RecN low > 76
Rhodanobacter sp000427505 FW510-R12 0.39 LRK53_RS02400 exodeoxyribonuclease III 0.29 LRK53_RS11400 DNA repair protein RecN — —
Ralstonia solanacearum PSI07 0.39 RPSI07_RS15785 exodeoxyribonuclease III 0.29 RPSI07_RS11890 DNA repair protein RecN low > 81
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF5268 Exodeoxyribonuclease III (EC 3.1.11.2) 0.27 GFF829 DNA repair protein RecN low > 90
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_15390 xth exodeoxyribonuclease III 0.30 OKGIIK_07340 recN DNA repair protein RecN low > 52
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS07325 exodeoxyribonuclease III 0.29 RR42_RS05910 DNA repair protein low > 128
Dechlorosoma suillum PS 0.39 Dsui_0044 exodeoxyribonuclease III 0.26 Dsui_3072 DNA repair protein RecN 0.61 4
Acidovorax sp. GW101-3H11 0.39 Ac3H11_4433 Exodeoxyribonuclease III (EC 3.1.11.2) 0.28 Ac3H11_3460 DNA repair protein RecN — —
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS14930 exodeoxyribonuclease III 0.29 ABZR86_RS05665 DNA repair protein RecN 0.37 59
Castellaniella sp019104865 MT123 0.38 ABCV34_RS03115 exodeoxyribonuclease III 0.29 ABCV34_RS07470 DNA repair protein RecN low > 48
Synechococcus elongatus PCC 7942 0.38 Synpcc7942_2607 xthA Exodeoxyribonuclease III 0.22 Synpcc7942_1779 recN DNA repair protein RecN 0.59 1
Synechocystis sp000284455 PCC 6803 0.38 SGL_RS12355 exodeoxyribonuclease III 0.17 SGL_RS11690 DNA repair protein RecN low > 51
Rhodanobacter denitrificans MT42 0.36 LRK55_RS08390 exodeoxyribonuclease III 0.29 LRK55_RS17815 DNA repair protein RecN low > 63
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS08625 exodeoxyribonuclease III 0.29 LRK54_RS17960 DNA repair protein RecN 0.47 55
Mycobacterium tuberculosis H37Rv 0.32 Rv0427c Probable exodeoxyribonuclease III protein XthA (exonuclease III) (EXO III) (AP endonuclease VI) 0.20 Rv1696 Probable DNA repair protein RecN (recombination protein N) low > 58
Pontibacter actiniarum KMM 6156, DSM 19842 0.29 CA264_17265 exodeoxyribonuclease III 0.21 CA264_13235 DNA repair protein RecN low > 74
Bacteroides stercoris CC31F 0.27 HMPREF1181_RS16605 exodeoxyribonuclease III 0.23 HMPREF1181_RS10900 DNA repair protein RecN low > 56
Cellulophaga baltica 18 0.27 M666_RS03605 exodeoxyribonuclease III 0.20 M666_RS17655 DNA repair protein RecN low > 67
Shewanella loihica PV-4 0.26 Shew_2262 exonuclease III (RefSeq) 0.27 Shew_1196 recombination and repair protein (RefSeq) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.26 Echvi_1056 exodeoxyribonuclease III 0.24 Echvi_2067 DNA repair protein RecN low > 79
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_09315 exodeoxyribonuclease III 0.26 CSW01_04395 DNA repair protein RecN low > 62
Bacteroides thetaiotaomicron VPI-5482 0.25 BT0630 exodeoxyribonuclease (NCBI ptt file) 0.23 BT1361 DNA repair protein recN (Recombination protein N) (NCBI ptt file) low > 81
Parabacteroides merdae CL09T00C40 0.25 HMPREF1078_RS00480 exodeoxyribonuclease III 0.22 HMPREF1078_RS02000 DNA repair protein RecN low > 61
Shewanella oneidensis MR-1 0.25 SO3037 xth exodeoxyribonuclease III (NCBI ptt file) 0.29 SO3462 recN DNA repair protein RecN (NCBI ptt file) 0.26 30
Bacteroides ovatus ATCC 8483 0.24 BACOVA_02252 exodeoxyribonuclease III 0.25 BACOVA_00200 DNA repair protein RecN low > 94
Shewanella sp. ANA-3 0.24 Shewana3_1503 exonuclease III (RefSeq) 0.29 Shewana3_1104 recombination and repair protein (RefSeq) low > 73
Pseudomonas simiae WCS417 0.23 PS417_16980 exonuclease III 0.30 PS417_24070 recombination and repair protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_27875 exonuclease III 0.30 AO353_05660 DNA repair protein RecN 0.21 92
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_1291 exodeoxyribonuclease III 0.29 B158DRAFT_0601 DNA replication and repair protein RecN low > 40
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS18930 exodeoxyribonuclease III 0.30 PFLU_RS25910 DNA repair protein RecN low > 109
Pseudomonas fluorescens SBW25 0.23 PFLU_RS18930 exodeoxyribonuclease III 0.30 PFLU_RS25910 DNA repair protein RecN low > 109
Klebsiella michiganensis M5al 0.23 BWI76_RS11665 exodeoxyribonuclease III 0.27 BWI76_RS21560 DNA repair protein RecN low > 92
Marinobacter adhaerens HP15 0.23 HP15_1776 exonuclease III 0.31 HP15_3084 DNA repair protein RecN low > 73
Serratia liquefaciens MT49 0.23 IAI46_14290 exodeoxyribonuclease III 0.27 IAI46_19635 DNA repair protein RecN low > 86
Enterobacter sp. TBS_079 0.23 MPMX20_01864 Exodeoxyribonuclease III 0.28 MPMX20_03486 DNA repair protein RecN low > 85
Dickeya dianthicola ME23 0.23 DZA65_RS10795 exodeoxyribonuclease III 0.25 DZA65_RS04235 DNA repair protein RecN low > 75
Dickeya dadantii 3937 0.23 DDA3937_RS10310 exodeoxyribonuclease III 0.25 DDA3937_RS04325 DNA repair protein RecN low > 74
Dickeya dianthicola 67-19 0.23 HGI48_RS10320 exodeoxyribonuclease III 0.25 HGI48_RS04320 DNA repair protein RecN low > 71
Erwinia tracheiphila SCR3 0.23 LU632_RS12950 xthA exodeoxyribonuclease III 0.27 LU632_RS16985 recN DNA repair protein RecN low > 74
Enterobacter asburiae PDN3 0.22 EX28DRAFT_1753 exodeoxyribonuclease III 0.27 EX28DRAFT_2719 DNA repair protein RecN low > 76
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_2476 Exodeoxyribonuclease III 0.30 Psyr_4197 DNA replication and repair protein RecN low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_2476 Exodeoxyribonuclease III 0.30 Psyr_4197 DNA replication and repair protein RecN low > 86
Pseudomonas sp. SVBP6 0.22 COO64_RS24405 xthA exodeoxyribonuclease III 0.30 COO64_RS15270 recN DNA repair protein RecN — —
Rahnella sp. WP5 0.22 EX31_RS06330 exodeoxyribonuclease III 0.29 EX31_RS21760 DNA repair protein RecN low > 89
Escherichia coli Nissle 1917 0.22 ECOLIN_RS09750 exodeoxyribonuclease III 0.27 ECOLIN_RS14775 DNA repair protein RecN low > 55
Pectobacterium carotovorum WPP14 0.22 HER17_RS11085 exodeoxyribonuclease III 0.26 HER17_RS17420 DNA repair protein RecN low > 75
Escherichia coli ECRC100 0.21 OKFHMN_26900 xthA exodeoxyribonuclease III 0.26 OKFHMN_21145 recN DNA repair protein RecN low > 80
Escherichia coli ECRC98 0.21 JDDGAC_01475 xthA exodeoxyribonuclease III 0.26 JDDGAC_24810 recN DNA repair protein RecN low > 86
Escherichia fergusonii Becca 0.21 EFB2_02244 Exodeoxyribonuclease III 0.27 EFB2_01277 DNA repair protein RecN low > 86
Escherichia coli ECRC99 0.21 KEDOAH_01210 xthA exodeoxyribonuclease III 0.26 KEDOAH_07075 recN DNA repair protein RecN — —
Escherichia coli ECRC101 0.21 MCAODC_18510 xthA exodeoxyribonuclease III 0.26 MCAODC_11670 recN DNA repair protein RecN low > 87
Escherichia coli ECRC102 0.21 NIAGMN_01165 xthA exodeoxyribonuclease III 0.26 NIAGMN_18915 recN DNA repair protein RecN — —
Escherichia coli BW25113 0.21 b1749 xthA exonuclease III (NCBI) 0.27 b2616 recN recombination and repair protein (NCBI) 0.20 19
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_01983 Exodeoxyribonuclease III 0.27 OHPLBJKB_01091 DNA repair protein RecN low > 73
Escherichia coli ECOR27 0.21 NOLOHH_17415 xthA exodeoxyribonuclease III 0.27 NOLOHH_12815 recN DNA repair protein RecN low > 75
Escherichia coli BL21 0.21 ECD_01718 exonuclease III 0.27 ECD_02504 recombination and repair protein — —
Escherichia coli ECRC62 0.21 BNILDI_16200 xthA exodeoxyribonuclease III 0.27 BNILDI_11620 recN DNA repair protein RecN low > 75
Alteromonas macleodii MIT1002 0.21 MIT1002_01652 Exodeoxyribonuclease III 0.27 MIT1002_01443 Recombination protein N low > 70
Shewanella amazonensis SB2B 0.21 Sama_2139 exodeoxyribonuclease III (RefSeq) 0.30 Sama_1026 recombination and repair protein (RefSeq) low > 62
Erwinia amylovora T8 0.21 OLJFJH_13265 exodeoxyribonuclease III 0.26 OLJFJH_10175 DNA repair protein RecN low > 58
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS17100 exodeoxyribonuclease III 0.24 HMPREF1058_RS18225 DNA repair protein RecN low > 67
Escherichia coli ECOR38 0.21 HEPCGN_05265 xthA exodeoxyribonuclease III 0.27 HEPCGN_20265 recN DNA repair protein RecN low > 87
Pantoea sp. MT58 0.20 IAI47_08990 exodeoxyribonuclease III 0.28 IAI47_04810 DNA repair protein RecN low > 76
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS13020 exodeoxyribonuclease III 0.24 ABI39_RS14500 DNA repair protein RecN low > 72
Fusobacterium nucleatum SB010 0.20 HUW76_10435 exodeoxyribonuclease III 0.22 HUW76_08055 DNA repair protein RecN low > 35
Desulfovibrio vulgaris Hildenborough JW710 0.19 DVU3259 xth exodeoxyribonuclease III (TIGR) 0.20 DVU2463 recN DNA repair protein RecN (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.17 DvMF_2456 exodeoxyribonuclease III (RefSeq) 0.19 DvMF_0923 SMC domain protein (RefSeq) low > 51
Bifidobacterium breve UCC2003 0.16 BBR_RS16630 exodeoxyribonuclease III 0.17 BBR_RS14030 DNA repair protein RecN low > 34

Not shown: 4 genomes with orthologs for MPMX19_04331 only; 3 genomes with orthologs for MPMX19_01601 only