Conservation of cofitness between PGA1_c24870 and PGA1_c29490 in Phaeobacter inhibens DSM 17395

101 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c24870 phosphoribosylaminoimidazole carboxylase ATPase subunit PurK 1.0 PGA1_c29490 dihydroxy-acid dehydratase LivD 0.89 9
Dinoroseobacter shibae DFL-12 0.71 Dshi_0680 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) 0.32 Dshi_0129 dihydroxy-acid dehydratase (RefSeq)
Caulobacter crescentus NA1000 Δfur 0.51 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.72 CCNA_03139 dihydroxy-acid dehydratase low > 67
Caulobacter crescentus NA1000 0.51 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.72 CCNA_03139 dihydroxy-acid dehydratase 0.82 39
Sinorhizobium meliloti 1021 0.50 SMc04002 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.77 SMc04045 dihydroxy-acid dehydratase 0.95 8
Agrobacterium fabrum C58 0.49 Atu3755 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.76 Atu1918 dihydroxy-acid dehydratase
Rhizobium sp. OAE497 0.49 ABIE40_RS16070 5-(carboxyamino)imidazole ribonucleotide synthase 0.76 ABIE40_RS08005 dihydroxy-acid dehydratase 0.76 76
Azospirillum brasilense Sp245 0.48 AZOBR_RS06140 phosphoribosylaminoimidazole carboxylase 0.73 AZOBR_RS15015 dihydroxy-acid dehydratase
Bosea sp. OAE506 0.48 ABIE41_RS09245 5-(carboxyamino)imidazole ribonucleotide synthase 0.30 ABIE41_RS15690 dihydroxy-acid dehydratase
Rhodopseudomonas palustris CGA009 0.45 TX73_021645 5-(carboxyamino)imidazole ribonucleotide synthase 0.76 TX73_007515 dihydroxy-acid dehydratase
Magnetospirillum magneticum AMB-1 0.45 AMB_RS11140 5-(carboxyamino)imidazole ribonucleotide synthase 0.74 AMB_RS12770 dihydroxy-acid dehydratase
Sphingomonas koreensis DSMZ 15582 0.45 Ga0059261_1428 5-(carboxyamino)imidazole ribonucleotide synthase 0.29 Ga0059261_4216 Dihydroxyacid dehydratase/phosphogluconate dehydratase
Rhodospirillum rubrum S1H 0.45 Rru_A1051 Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) 0.70 Rru_A1786 Dihydroxy-acid dehydratase (NCBI) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.45 A4249_RS08935 5-(carboxyamino)imidazole ribonucleotide synthase 0.25 A4249_RS10030 dihydroxy-acid dehydratase
Azospirillum sp. SherDot2 0.42 MPMX19_01418 N5-carboxyaminoimidazole ribonucleotide synthase 0.72 MPMX19_05356 Dihydroxy-acid dehydratase
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase 0.70 HSERO_RS02650 dihydroxy-acid dehydratase
Pseudomonas sp. RS175 0.37 PFR28_04495 N5-carboxyaminoimidazole ribonucleotide synthase 0.75 PFR28_04278 Dihydroxy-acid dehydratase
Pseudomonas putida KT2440 0.37 PP_5335 N5-carboxyaminoimidazole ribonucleotide synthase 0.74 PP_5128 Dihydroxy-acid dehydratase
Pseudomonas stutzeri RCH2 0.37 Psest_4068 phosphoribosylaminoimidazole carboxylase, PurK protein 0.74 Psest_0234 dihydroxy-acid dehydratase
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_4081 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.74 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9)
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_04185 5-(carboxyamino)imidazole ribonucleotide synthase 0.72 H281DRAFT_05312 dihydroxyacid dehydratase
Paraburkholderia graminis OAS925 0.36 ABIE53_003423 5-(carboxyamino)imidazole ribonucleotide synthase 0.72 ABIE53_006513 dihydroxy-acid dehydratase
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS16245 phosphoribosylaminoimidazole carboxylase 0.70 BPHYT_RS10100 dihydroxy-acid dehydratase 0.67 66
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.2012.1 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.73 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.71 38
Dechlorosoma suillum PS 0.36 Dsui_0091 phosphoribosylaminoimidazole carboxylase, PurK protein 0.72 Dsui_1122 dihydroxy-acid dehydratase
Lysobacter sp. OAE881 0.36 ABIE51_RS15390 5-(carboxyamino)imidazole ribonucleotide synthase 0.27 ABIE51_RS17540 dihydroxy-acid dehydratase low > 62
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS02450 5-(carboxyamino)imidazole ribonucleotide synthase 0.73 QEN71_RS21095 dihydroxy-acid dehydratase low > 153
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_11075 phosphoribosylaminoimidazole carboxylase 0.74 AO356_13250 dihydroxy-acid dehydratase
Pseudomonas sp. S08-1 0.35 OH686_13380 N5-carboxyaminoimidazole ribonucleotide synthase 0.74 OH686_14100 dihydroxy-acid dehydratase
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_747 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.75 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9)
Marinobacter adhaerens HP15 0.35 HP15_2350 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.68 HP15_595 dihydroxy-acid dehydratase
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase 0.74 Psyr_0469 dihydroxyacid dehydratase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase 0.74 Psyr_0469 dihydroxyacid dehydratase
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_2028 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.75 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9)
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_09935 phosphoribosylaminoimidazole carboxylase 0.75 AO353_08345 dihydroxy-acid dehydratase
Pseudomonas simiae WCS417 0.34 PS417_28115 phosphoribosylaminoimidazole carboxylase 0.74 PS417_26890 dihydroxy-acid dehydratase
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase 0.75 PFLU_RS28535 dihydroxy-acid dehydratase
Pseudomonas fluorescens SBW25 0.34 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase 0.75 PFLU_RS28535 dihydroxy-acid dehydratase
Acinetobacter radioresistens SK82 0.34 MPMX26_03050 N5-carboxyaminoimidazole ribonucleotide synthase 0.30 MPMX26_03019 Dihydroxy-acid dehydratase low > 36
Variovorax sp. SCN45 0.34 GFF5513 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18) 0.31 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF2770 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.61 GFF2073 Dihydroxy-acid dehydratase (EC 4.2.1.9)
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.28 OKGIIK_13600 ilvD dihydroxy-acid dehydratase
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS03230 phosphoribosylaminoimidazole carboxylase 0.30 RR42_RS16210 dihydroxy-acid dehydratase
Bifidobacterium breve UCC2003 0.33 BBR_RS13300 5-(carboxyamino)imidazole ribonucleotide synthase 0.55 BBR_RS17635 dihydroxy-acid dehydratase low > 34
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase 0.27 ABZR86_RS15945 dihydroxy-acid dehydratase
Variovorax sp. OAS795 0.32 ABID97_RS01700 5-(carboxyamino)imidazole ribonucleotide synthase 0.31 ABID97_RS17500 dihydroxy-acid dehydratase
Castellaniella sp019104865 MT123 0.32 ABCV34_RS00565 5-(carboxyamino)imidazole ribonucleotide synthase 0.69 ABCV34_RS14810 dihydroxy-acid dehydratase
Ralstonia solanacearum PSI07 0.32 RPSI07_RS21130 5-(carboxyamino)imidazole ribonucleotide synthase 0.30 RPSI07_RS12840 dihydroxy-acid dehydratase
Acidovorax sp. GW101-3H11 0.32 Ac3H11_675 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.73 Ac3H11_955 Dihydroxy-acid dehydratase (EC 4.2.1.9)
Ralstonia solanacearum GMI1000 0.31 RS_RS02885 5-(carboxyamino)imidazole ribonucleotide synthase 0.30 RS_RS12105 dihydroxy-acid dehydratase
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS12200 5-(carboxyamino)imidazole ribonucleotide synthase 0.30 RALBFv3_RS04535 dihydroxy-acid dehydratase
Ralstonia solanacearum UW163 0.31 UW163_RS01410 5-(carboxyamino)imidazole ribonucleotide synthase 0.30 UW163_RS09135 dihydroxy-acid dehydratase
Rhodanobacter denitrificans MT42 0.31 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase 0.26 LRK55_RS09960 dihydroxy-acid dehydratase low > 63
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS08090 5-(carboxyamino)imidazole ribonucleotide synthase 0.73 ABZR87_RS00240 dihydroxy-acid dehydratase
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase 0.26 LRK54_RS10320 dihydroxy-acid dehydratase
Pantoea sp. MT58 0.30 IAI47_14355 5-(carboxyamino)imidazole ribonucleotide synthase 0.71 IAI47_01035 dihydroxy-acid dehydratase 0.75 41
Escherichia coli ECOR27 0.29 NOLOHH_00830 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.71 NOLOHH_06775 ilvD dihydroxy-acid dehydratase low > 57
Escherichia coli Nissle 1917 0.29 ECOLIN_RS03025 5-(carboxyamino)imidazole ribonucleotide synthase 0.71 ECOLIN_RS21665 dihydroxy-acid dehydratase low > 52
Escherichia coli BL21 0.29 ECD_00472 N5-carboxyaminoimidazole ribonucleotide synthase 0.71 ECD_03649 dihydroxyacid dehydratase low > 60
Escherichia coli ECOR38 0.29 HEPCGN_06480 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.71 HEPCGN_13350 ilvD dihydroxy-acid dehydratase low > 85
Echinicola vietnamensis KMM 6221, DSM 17526 0.29 Echvi_0884 phosphoribosylaminoimidazole carboxylase, PurK protein 0.27 Echvi_2055 dihydroxy-acid dehydratase
Escherichia fergusonii Becca 0.29 EFB2_03540 N5-carboxyaminoimidazole ribonucleotide synthase 0.71 EFB2_04865 Dihydroxy-acid dehydratase low > 86
Synechococcus elongatus PCC 7942 0.29 Synpcc7942_1428 purK phosphoribosylaminoimidazole carboxylase ATPase subunit 0.74 Synpcc7942_0626 ilvD dihydroxy-acid dehydratase
Escherichia coli ECRC62 0.29 BNILDI_22260 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.71 BNILDI_04750 ilvD dihydroxy-acid dehydratase
Escherichia coli ECRC101 0.28 OKFHMN_07840 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.71 OKFHMN_14640 ilvD dihydroxy-acid dehydratase
Escherichia coli ECRC99 0.28 KEDOAH_20130 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.71 KEDOAH_13510 ilvD dihydroxy-acid dehydratase
Escherichia coli ECRC102 0.28 NIAGMN_05895 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.71 NIAGMN_12395 ilvD dihydroxy-acid dehydratase
Escherichia coli ECRC101 0.28 MCAODC_27060 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.71 MCAODC_05145 ilvD dihydroxy-acid dehydratase
Escherichia coli ECRC98 0.28 JDDGAC_11490 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.71 JDDGAC_18260 ilvD dihydroxy-acid dehydratase
Escherichia coli BW25113 0.28 b0522 purK phosphoribosylaminoimidazole carboxylase (NCBI) 0.71 b3771 ilvD dihydroxy-acid dehydratase (NCBI) 0.80 33
Shewanella loihica PV-4 0.28 Shew_1249 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) 0.69 Shew_0292 dihydroxy-acid dehydratase (RefSeq) 0.67 31
Enterobacter asburiae PDN3 0.28 EX28DRAFT_2460 phosphoribosylaminoimidazole carboxylase, PurK protein 0.71 EX28DRAFT_4443 dihydroxy-acid dehydratase
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase 0.73 CSW01_00140 dihydroxy-acid dehydratase low > 62
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_03159 N5-carboxyaminoimidazole ribonucleotide synthase 0.71 OHPLBJKB_04282 Dihydroxy-acid dehydratase low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF4438 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.71 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 78
Enterobacter sp. TBS_079 0.28 MPMX20_01097 N5-carboxyaminoimidazole ribonucleotide synthase 0.71 MPMX20_04499 Dihydroxy-acid dehydratase 0.84 9
Rahnella sp. WP5 0.28 EX31_RS22620 5-(carboxyamino)imidazole ribonucleotide synthase 0.66 EX31_RS15005 dihydroxy-acid dehydratase 0.92 22
Klebsiella michiganensis M5al 0.28 BWI76_RS07065 5-(carboxyamino)imidazole ribonucleotide synthase 0.71 BWI76_RS00975 dihydroxy-acid dehydratase 0.83 9
Erwinia tracheiphila SCR3 0.27 LU632_RS15250 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.68 LU632_RS24400 ilvD dihydroxy-acid dehydratase low > 74
Alteromonas macleodii MIT1002 0.26 MIT1002_00522 N5-carboxyaminoimidazole ribonucleotide synthase 0.71 MIT1002_04041 Dihydroxy-acid dehydratase 0.99 1
Serratia liquefaciens MT49 0.26 IAI46_05370 5-(carboxyamino)imidazole ribonucleotide synthase 0.69 IAI46_24345 dihydroxy-acid dehydratase 0.72 35
Mycobacterium tuberculosis H37Rv 0.25 Rv3276c Probable phosphoribosylaminoimidazole carboxylase ATPase subunit PurK (air carboxylase) (AIRC) 0.33 Rv0189c Probable dihydroxy-acid dehydratase IlvD (dad)
Dickeya dianthicola 67-19 0.25 HGI48_RS15190 5-(carboxyamino)imidazole ribonucleotide synthase 0.70 HGI48_RS20295 dihydroxy-acid dehydratase 0.68 22
Mucilaginibacter yixingensis YX-36 DSM 26809 0.25 ABZR88_RS09290 5-(carboxyamino)imidazole ribonucleotide synthase 0.28 ABZR88_RS11575 dihydroxy-acid dehydratase
Dickeya dianthicola ME23 0.25 DZA65_RS15995 5-(carboxyamino)imidazole ribonucleotide synthase 0.69 DZA65_RS21335 dihydroxy-acid dehydratase 0.60 58
Pectobacterium carotovorum WPP14 0.25 HER17_RS06470 5-(carboxyamino)imidazole ribonucleotide synthase 0.71 HER17_RS01075 dihydroxy-acid dehydratase 0.95 18
Dickeya dadantii 3937 0.25 DDA3937_RS15110 5-(carboxyamino)imidazole ribonucleotide synthase 0.70 DDA3937_RS20155 dihydroxy-acid dehydratase 0.81 16
Shewanella oneidensis MR-1 0.25 SO3555 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) 0.68 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) 0.88 32
Shewanella amazonensis SB2B 0.25 Sama_1063 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.69 Sama_3279 dihydroxy-acid dehydratase (RefSeq) 0.84 28
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS07745 5-(carboxyamino)imidazole ribonucleotide synthase 0.27 CA265_RS15795 dihydroxy-acid dehydratase
Shewanella sp. ANA-3 0.24 Shewana3_3156 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.69 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) 0.90 17
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_12600 5-(carboxyamino)imidazole ribonucleotide synthase 0.27 CA264_06935 dihydroxy-acid dehydratase low > 74
Methanococcus maripaludis S2 0.19 MMP_RS00715 formate-dependent phosphoribosylglycinamide formyltransferase 0.33 MMP_RS01700 dihydroxy-acid dehydratase
Methanococcus maripaludis JJ 0.18 MMJJ_RS04770 formate-dependent phosphoribosylglycinamide formyltransferase 0.34 MMJJ_RS03675 dihydroxy-acid dehydratase
Desulfovibrio vulgaris Hildenborough JW710 0.17 DVU0723 purT phosphoribosylglycinamide formyltransferase 2 (TIGR) 0.39 DVU3373 ilvD dihydroxy-acid dehydratase (TIGR) low > 55
Phocaeicola dorei CL03T12C01 0.16 ABI39_RS14185 formate-dependent phosphoribosylglycinamide formyltransferase 0.61 ABI39_RS12715 dihydroxy-acid dehydratase low > 72
Phocaeicola vulgatus CL09T03C04 0.16 HMPREF1058_RS17920 formate-dependent phosphoribosylglycinamide formyltransferase 0.61 HMPREF1058_RS16815 dihydroxy-acid dehydratase low > 67
Desulfovibrio vulgaris Miyazaki F 0.16 DvMF_2756 purT phosphoribosylglycinamide formyltransferase 2 (RefSeq) 0.39 DvMF_2034 dihydroxy-acid dehydratase (RefSeq) low > 51
Parabacteroides merdae CL09T00C40 0.15 HMPREF1078_RS10980 formate-dependent phosphoribosylglycinamide formyltransferase 0.62 HMPREF1078_RS16695 dihydroxy-acid dehydratase low > 61
Bacteroides stercoris CC31F 0.15 HMPREF1181_RS16250 formate-dependent phosphoribosylglycinamide formyltransferase 0.61 HMPREF1181_RS08335 dihydroxy-acid dehydratase low > 56
Bacteroides thetaiotaomicron VPI-5482 0.15 BT0704 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) 0.60 BT2078 dihydroxy-acid dehydratase (NCBI ptt file) 0.22 24
Bacteroides ovatus ATCC 8483 0.14 BACOVA_02411 phosphoribosylglycinamide formyltransferase 2 0.59 BACOVA_03302 dihydroxy-acid dehydratase 0.34 58

Not shown: 1 genomes with orthologs for PGA1_c24870 only; 0 genomes with orthologs for PGA1_c29490 only