Conservation of cofitness between PGA1_c29490 and PGA1_c24870 in Phaeobacter inhibens DSM 17395

101 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c29490 dihydroxy-acid dehydratase LivD 1.0 PGA1_c24870 phosphoribosylaminoimidazole carboxylase ATPase subunit PurK 0.89 8
Sinorhizobium meliloti 1021 0.77 SMc04045 dihydroxy-acid dehydratase 0.50 SMc04002 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.95 21
Rhizobium sp. OAE497 0.76 ABIE40_RS08005 dihydroxy-acid dehydratase 0.49 ABIE40_RS16070 5-(carboxyamino)imidazole ribonucleotide synthase low > 107
Agrobacterium fabrum C58 0.76 Atu1918 dihydroxy-acid dehydratase 0.49 Atu3755 phosphoribosylaminoimidazole carboxylase ATPase subunit
Rhodopseudomonas palustris CGA009 0.76 TX73_007515 dihydroxy-acid dehydratase 0.45 TX73_021645 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.35 PfGW456L13_747 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_08345 dihydroxy-acid dehydratase 0.34 AO353_09935 phosphoribosylaminoimidazole carboxylase
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS28535 dihydroxy-acid dehydratase 0.34 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas fluorescens SBW25 0.75 PFLU_RS28535 dihydroxy-acid dehydratase 0.34 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.34 Pf1N1B4_2028 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Pseudomonas sp. RS175 0.75 PFR28_04278 Dihydroxy-acid dehydratase 0.37 PFR28_04495 N5-carboxyaminoimidazole ribonucleotide synthase
Pseudomonas simiae WCS417 0.74 PS417_26890 dihydroxy-acid dehydratase 0.34 PS417_28115 phosphoribosylaminoimidazole carboxylase
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.36 Pf6N2E2_4081 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Pseudomonas sp. S08-1 0.74 OH686_14100 dihydroxy-acid dehydratase 0.35 OH686_13380 N5-carboxyaminoimidazole ribonucleotide synthase
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_13250 dihydroxy-acid dehydratase 0.36 AO356_11075 phosphoribosylaminoimidazole carboxylase
Pseudomonas putida KT2440 0.74 PP_5128 Dihydroxy-acid dehydratase 0.37 PP_5335 N5-carboxyaminoimidazole ribonucleotide synthase
Magnetospirillum magneticum AMB-1 0.74 AMB_RS12770 dihydroxy-acid dehydratase 0.45 AMB_RS11140 5-(carboxyamino)imidazole ribonucleotide synthase
Synechococcus elongatus PCC 7942 0.74 Synpcc7942_0626 ilvD dihydroxy-acid dehydratase 0.29 Synpcc7942_1428 purK phosphoribosylaminoimidazole carboxylase ATPase subunit
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0469 dihydroxyacid dehydratase 0.35 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0469 dihydroxyacid dehydratase 0.35 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas stutzeri RCH2 0.74 Psest_0234 dihydroxy-acid dehydratase 0.37 Psest_4068 phosphoribosylaminoimidazole carboxylase, PurK protein
Paraburkholderia sabiae LMG 24235 0.73 QEN71_RS21095 dihydroxy-acid dehydratase 0.36 QEN71_RS02450 5-(carboxyamino)imidazole ribonucleotide synthase low > 153
Azospirillum brasilense Sp245 0.73 AZOBR_RS15015 dihydroxy-acid dehydratase 0.48 AZOBR_RS06140 phosphoribosylaminoimidazole carboxylase
Acidovorax sp. GW101-3H11 0.73 Ac3H11_955 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.32 Ac3H11_675 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS00240 dihydroxy-acid dehydratase 0.31 ABZR87_RS08090 5-(carboxyamino)imidazole ribonucleotide synthase
Xanthomonas campestris pv. campestris strain 8004 0.73 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.36 Xcc-8004.2012.1 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.71 55
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_00140 dihydroxy-acid dehydratase 0.28 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase low > 62
Paraburkholderia bryophila 376MFSha3.1 0.72 H281DRAFT_05312 dihydroxyacid dehydratase 0.36 H281DRAFT_04185 5-(carboxyamino)imidazole ribonucleotide synthase
Azospirillum sp. SherDot2 0.72 MPMX19_05356 Dihydroxy-acid dehydratase 0.42 MPMX19_01418 N5-carboxyaminoimidazole ribonucleotide synthase
Dechlorosoma suillum PS 0.72 Dsui_1122 dihydroxy-acid dehydratase 0.36 Dsui_0091 phosphoribosylaminoimidazole carboxylase, PurK protein
Paraburkholderia graminis OAS925 0.72 ABIE53_006513 dihydroxy-acid dehydratase 0.36 ABIE53_003423 5-(carboxyamino)imidazole ribonucleotide synthase
Caulobacter crescentus NA1000 0.72 CCNA_03139 dihydroxy-acid dehydratase 0.51 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit low > 66
Caulobacter crescentus NA1000 Δfur 0.72 CCNA_03139 dihydroxy-acid dehydratase 0.51 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit low > 67
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.28 GFF4438 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.46 14
Escherichia coli Nissle 1917 0.71 ECOLIN_RS21665 dihydroxy-acid dehydratase 0.29 ECOLIN_RS03025 5-(carboxyamino)imidazole ribonucleotide synthase low > 52
Escherichia fergusonii Becca 0.71 EFB2_04865 Dihydroxy-acid dehydratase 0.29 EFB2_03540 N5-carboxyaminoimidazole ribonucleotide synthase low > 86
Escherichia coli BW25113 0.71 b3771 ilvD dihydroxy-acid dehydratase (NCBI) 0.28 b0522 purK phosphoribosylaminoimidazole carboxylase (NCBI) 0.80 64
Enterobacter sp. TBS_079 0.71 MPMX20_04499 Dihydroxy-acid dehydratase 0.28 MPMX20_01097 N5-carboxyaminoimidazole ribonucleotide synthase 0.84 57
Alteromonas macleodii MIT1002 0.71 MIT1002_04041 Dihydroxy-acid dehydratase 0.26 MIT1002_00522 N5-carboxyaminoimidazole ribonucleotide synthase 0.99 1
Escherichia coli ECRC62 0.71 BNILDI_04750 ilvD dihydroxy-acid dehydratase 0.29 BNILDI_22260 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Escherichia coli ECOR38 0.71 HEPCGN_13350 ilvD dihydroxy-acid dehydratase 0.29 HEPCGN_06480 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 85
Escherichia coli ECOR27 0.71 NOLOHH_06775 ilvD dihydroxy-acid dehydratase 0.29 NOLOHH_00830 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 57
Escherichia coli BL21 0.71 ECD_03649 dihydroxyacid dehydratase 0.29 ECD_00472 N5-carboxyaminoimidazole ribonucleotide synthase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_04282 Dihydroxy-acid dehydratase 0.28 OHPLBJKB_03159 N5-carboxyaminoimidazole ribonucleotide synthase low > 73
Escherichia coli ECRC102 0.71 NIAGMN_12395 ilvD dihydroxy-acid dehydratase 0.28 NIAGMN_05895 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Escherichia coli ECRC98 0.71 JDDGAC_18260 ilvD dihydroxy-acid dehydratase 0.28 JDDGAC_11490 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Escherichia coli ECRC101 0.71 OKFHMN_14640 ilvD dihydroxy-acid dehydratase 0.28 OKFHMN_07840 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Escherichia coli ECRC99 0.71 KEDOAH_13510 ilvD dihydroxy-acid dehydratase 0.28 KEDOAH_20130 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Escherichia coli ECRC101 0.71 MCAODC_05145 ilvD dihydroxy-acid dehydratase 0.28 MCAODC_27060 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Enterobacter asburiae PDN3 0.71 EX28DRAFT_4443 dihydroxy-acid dehydratase 0.28 EX28DRAFT_2460 phosphoribosylaminoimidazole carboxylase, PurK protein
Pectobacterium carotovorum WPP14 0.71 HER17_RS01075 dihydroxy-acid dehydratase 0.25 HER17_RS06470 5-(carboxyamino)imidazole ribonucleotide synthase 0.95 34
Klebsiella michiganensis M5al 0.71 BWI76_RS00975 dihydroxy-acid dehydratase 0.28 BWI76_RS07065 5-(carboxyamino)imidazole ribonucleotide synthase 0.83 51
Pantoea sp. MT58 0.71 IAI47_01035 dihydroxy-acid dehydratase 0.30 IAI47_14355 5-(carboxyamino)imidazole ribonucleotide synthase low > 76
Herbaspirillum seropedicae SmR1 0.70 HSERO_RS02650 dihydroxy-acid dehydratase 0.37 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase
Dickeya dadantii 3937 0.70 DDA3937_RS20155 dihydroxy-acid dehydratase 0.25 DDA3937_RS15110 5-(carboxyamino)imidazole ribonucleotide synthase 0.81 47
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS10100 dihydroxy-acid dehydratase 0.36 BPHYT_RS16245 phosphoribosylaminoimidazole carboxylase 0.67 55
Dickeya dianthicola 67-19 0.70 HGI48_RS20295 dihydroxy-acid dehydratase 0.25 HGI48_RS15190 5-(carboxyamino)imidazole ribonucleotide synthase low > 71
Rhodospirillum rubrum S1H 0.70 Rru_A1786 Dihydroxy-acid dehydratase (NCBI) 0.45 Rru_A1051 Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) low > 58
Dickeya dianthicola ME23 0.69 DZA65_RS21335 dihydroxy-acid dehydratase 0.25 DZA65_RS15995 5-(carboxyamino)imidazole ribonucleotide synthase low > 75
Serratia liquefaciens MT49 0.69 IAI46_24345 dihydroxy-acid dehydratase 0.26 IAI46_05370 5-(carboxyamino)imidazole ribonucleotide synthase 0.72 23
Shewanella sp. ANA-3 0.69 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) 0.24 Shewana3_3156 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.90 63
Shewanella loihica PV-4 0.69 Shew_0292 dihydroxy-acid dehydratase (RefSeq) 0.28 Shew_1249 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) low > 60
Shewanella amazonensis SB2B 0.69 Sama_3279 dihydroxy-acid dehydratase (RefSeq) 0.25 Sama_1063 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) low > 62
Castellaniella sp019104865 MT123 0.69 ABCV34_RS14810 dihydroxy-acid dehydratase 0.32 ABCV34_RS00565 5-(carboxyamino)imidazole ribonucleotide synthase
Shewanella oneidensis MR-1 0.68 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) 0.25 SO3555 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) 0.88 68
Marinobacter adhaerens HP15 0.68 HP15_595 dihydroxy-acid dehydratase 0.35 HP15_2350 phosphoribosylaminoimidazole carboxylase ATPase subunit
Erwinia tracheiphila SCR3 0.68 LU632_RS24400 ilvD dihydroxy-acid dehydratase 0.27 LU632_RS15250 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 74
Rahnella sp. WP5 0.66 EX31_RS15005 dihydroxy-acid dehydratase 0.28 EX31_RS22620 5-(carboxyamino)imidazole ribonucleotide synthase 0.92 62
Parabacteroides merdae CL09T00C40 0.62 HMPREF1078_RS16695 dihydroxy-acid dehydratase 0.15 HMPREF1078_RS10980 formate-dependent phosphoribosylglycinamide formyltransferase low > 61
Phocaeicola dorei CL03T12C01 0.61 ABI39_RS12715 dihydroxy-acid dehydratase 0.16 ABI39_RS14185 formate-dependent phosphoribosylglycinamide formyltransferase low > 72
Phocaeicola vulgatus CL09T03C04 0.61 HMPREF1058_RS16815 dihydroxy-acid dehydratase 0.16 HMPREF1058_RS17920 formate-dependent phosphoribosylglycinamide formyltransferase low > 67
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF2073 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.34 GFF2770 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Bacteroides stercoris CC31F 0.61 HMPREF1181_RS08335 dihydroxy-acid dehydratase 0.15 HMPREF1181_RS16250 formate-dependent phosphoribosylglycinamide formyltransferase low > 56
Bacteroides thetaiotaomicron VPI-5482 0.60 BT2078 dihydroxy-acid dehydratase (NCBI ptt file) 0.15 BT0704 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.59 BACOVA_03302 dihydroxy-acid dehydratase 0.14 BACOVA_02411 phosphoribosylglycinamide formyltransferase 2 low > 94
Bifidobacterium breve UCC2003 0.55 BBR_RS17635 dihydroxy-acid dehydratase 0.33 BBR_RS13300 5-(carboxyamino)imidazole ribonucleotide synthase low > 34
Desulfovibrio vulgaris Hildenborough JW710 0.39 DVU3373 ilvD dihydroxy-acid dehydratase (TIGR) 0.17 DVU0723 purT phosphoribosylglycinamide formyltransferase 2 (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.39 DvMF_2034 dihydroxy-acid dehydratase (RefSeq) 0.16 DvMF_2756 purT phosphoribosylglycinamide formyltransferase 2 (RefSeq) low > 51
Methanococcus maripaludis JJ 0.34 MMJJ_RS03675 dihydroxy-acid dehydratase 0.18 MMJJ_RS04770 formate-dependent phosphoribosylglycinamide formyltransferase
Methanococcus maripaludis S2 0.33 MMP_RS01700 dihydroxy-acid dehydratase 0.19 MMP_RS00715 formate-dependent phosphoribosylglycinamide formyltransferase
Mycobacterium tuberculosis H37Rv 0.33 Rv0189c Probable dihydroxy-acid dehydratase IlvD (dad) 0.25 Rv3276c Probable phosphoribosylaminoimidazole carboxylase ATPase subunit PurK (air carboxylase) (AIRC)
Dinoroseobacter shibae DFL-12 0.32 Dshi_0129 dihydroxy-acid dehydratase (RefSeq) 0.71 Dshi_0680 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq)
Variovorax sp. OAS795 0.31 ABID97_RS17500 dihydroxy-acid dehydratase 0.32 ABID97_RS01700 5-(carboxyamino)imidazole ribonucleotide synthase
Variovorax sp. SCN45 0.31 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.34 GFF5513 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18)
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS16210 dihydroxy-acid dehydratase 0.33 RR42_RS03230 phosphoribosylaminoimidazole carboxylase
Ralstonia solanacearum GMI1000 0.30 RS_RS12105 dihydroxy-acid dehydratase 0.31 RS_RS02885 5-(carboxyamino)imidazole ribonucleotide synthase
Ralstonia solanacearum UW163 0.30 UW163_RS09135 dihydroxy-acid dehydratase 0.31 UW163_RS01410 5-(carboxyamino)imidazole ribonucleotide synthase
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS04535 dihydroxy-acid dehydratase 0.31 RALBFv3_RS12200 5-(carboxyamino)imidazole ribonucleotide synthase
Ralstonia solanacearum PSI07 0.30 RPSI07_RS12840 dihydroxy-acid dehydratase 0.32 RPSI07_RS21130 5-(carboxyamino)imidazole ribonucleotide synthase
Acinetobacter radioresistens SK82 0.30 MPMX26_03019 Dihydroxy-acid dehydratase 0.34 MPMX26_03050 N5-carboxyaminoimidazole ribonucleotide synthase low > 36
Bosea sp. OAE506 0.30 ABIE41_RS15690 dihydroxy-acid dehydratase 0.48 ABIE41_RS09245 5-(carboxyamino)imidazole ribonucleotide synthase
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_4216 Dihydroxyacid dehydratase/phosphogluconate dehydratase 0.45 Ga0059261_1428 5-(carboxyamino)imidazole ribonucleotide synthase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.28 ABZR88_RS11575 dihydroxy-acid dehydratase 0.25 ABZR88_RS09290 5-(carboxyamino)imidazole ribonucleotide synthase
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_13600 ilvD dihydroxy-acid dehydratase 0.33 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Echinicola vietnamensis KMM 6221, DSM 17526 0.27 Echvi_2055 dihydroxy-acid dehydratase 0.29 Echvi_0884 phosphoribosylaminoimidazole carboxylase, PurK protein
Pontibacter actiniarum KMM 6156, DSM 19842 0.27 CA264_06935 dihydroxy-acid dehydratase 0.24 CA264_12600 5-(carboxyamino)imidazole ribonucleotide synthase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.27 CA265_RS15795 dihydroxy-acid dehydratase 0.25 CA265_RS07745 5-(carboxyamino)imidazole ribonucleotide synthase
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS15945 dihydroxy-acid dehydratase 0.32 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase
Lysobacter sp. OAE881 0.27 ABIE51_RS17540 dihydroxy-acid dehydratase 0.36 ABIE51_RS15390 5-(carboxyamino)imidazole ribonucleotide synthase low > 62
Rhodanobacter denitrificans MT42 0.26 LRK55_RS09960 dihydroxy-acid dehydratase 0.31 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase low > 63
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS10320 dihydroxy-acid dehydratase 0.31 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase
Brevundimonas sp. GW460-12-10-14-LB2 0.25 A4249_RS10030 dihydroxy-acid dehydratase 0.45 A4249_RS08935 5-(carboxyamino)imidazole ribonucleotide synthase

Not shown: 0 genomes with orthologs for PGA1_c29490 only; 1 genomes with orthologs for PGA1_c24870 only