Conservation of cofitness between DZA65_RS19385 and DZA65_RS19380 in Dickeya dianthicola ME23

103 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS19385 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 1.0 DZA65_RS19380 carbamoyl-phosphate synthase large subunit 0.97 1
Dickeya dianthicola 67-19 1.00 HGI48_RS18245 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 1.00 HGI48_RS18240 carbamoyl-phosphate synthase large subunit 0.91 1
Dickeya dadantii 3937 0.95 DDA3937_RS18310 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.99 DDA3937_RS18305 carbamoyl-phosphate synthase large subunit 0.97 1
Pectobacterium carotovorum WPP14 0.93 HER17_RS02895 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.96 HER17_RS02900 carbamoyl-phosphate synthase large subunit 0.98 1
Rahnella sp. WP5 0.91 EX31_RS03835 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.94 EX31_RS03830 carbamoyl-phosphate synthase large subunit 0.99 1
Klebsiella michiganensis M5al 0.89 BWI76_RS04465 carbamoyl-phosphate synthase small subunit 0.94 BWI76_RS04470 carbamoyl phosphate synthase large subunit 0.93 1
Enterobacter asburiae PDN3 0.88 EX28DRAFT_3637 carbamoyl-phosphate synthase, small subunit 0.94 EX28DRAFT_3638 carbamoyl-phosphate synthase, large subunit
Escherichia coli HS(pFamp)R (ATCC 700891) 0.88 OHPLBJKB_03625 Carbamoyl-phosphate synthase small chain 0.94 OHPLBJKB_03624 Carbamoyl-phosphate synthase large chain 0.89 1
Serratia liquefaciens MT49 0.88 IAI46_03190 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.95 IAI46_03195 carbamoyl-phosphate synthase large subunit 0.97 1
Escherichia coli BW25113 0.88 b0032 carA carbamoyl-phosphate synthase small subunit (NCBI) 0.94 b0033 carB carbamoyl-phosphate synthase large subunit (NCBI) 0.97 1
Escherichia coli BL21 0.88 ECD_00036 carbamoyl phosphate synthetase small subunit, glutamine amidotransferase 0.94 ECD_00037 carbamoyl-phosphate synthase large subunit 0.97 1
Escherichia coli ECRC100 0.88 OKFHMN_10945 carA carbamoyl phosphate synthase small subunit 0.94 OKFHMN_10940 carB carbamoyl-phosphate synthase large subunit 0.96 3
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF214 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.94 GFF213 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) 0.85 1
Escherichia coli ECRC99 0.88 KEDOAH_17210 carA carbamoyl phosphate synthase small subunit 0.94 KEDOAH_17215 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECRC101 0.88 MCAODC_01460 carA carbamoyl phosphate synthase small subunit 0.94 MCAODC_01455 carB carbamoyl-phosphate synthase large subunit 0.97 1
Escherichia coli ECRC102 0.88 NIAGMN_08795 carA carbamoyl phosphate synthase small subunit 0.94 NIAGMN_08790 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECRC98 0.88 JDDGAC_14540 carA carbamoyl phosphate synthase small subunit 0.94 JDDGAC_14535 carB carbamoyl-phosphate synthase large subunit 0.95 1
Escherichia coli ECOR27 0.88 NOLOHH_03275 carA carbamoyl phosphate synthase small subunit 0.94 NOLOHH_03270 carB carbamoyl-phosphate synthase large subunit 0.98 1
Escherichia coli ECRC62 0.88 BNILDI_08325 carA carbamoyl phosphate synthase small subunit 0.94 BNILDI_08330 carB carbamoyl-phosphate synthase large subunit 0.96 3
Escherichia coli ECOR38 0.88 HEPCGN_08930 carA carbamoyl phosphate synthase small subunit 0.94 HEPCGN_08925 carB carbamoyl-phosphate synthase large subunit 0.98 1
Escherichia coli Nissle 1917 0.88 ECOLIN_RS00175 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.94 ECOLIN_RS00180 carbamoyl-phosphate synthase large subunit 0.93 1
Escherichia fergusonii Becca 0.88 EFB2_04013 Carbamoyl-phosphate synthase small chain 0.94 EFB2_04012 Carbamoyl-phosphate synthase large chain low > 86
Enterobacter sp. TBS_079 0.85 MPMX20_00739 Carbamoyl-phosphate synthase small chain 0.94 MPMX20_00740 Carbamoyl-phosphate synthase large chain 0.96 1
Pantoea sp. MT58 0.84 IAI47_16120 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.93 IAI47_16115 carbamoyl-phosphate synthase large subunit 0.99 1
Erwinia tracheiphila SCR3 0.84 LU632_RS02755 carA glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.92 LU632_RS02750 carB carbamoyl-phosphate synthase large subunit 0.95 1
Vibrio cholerae E7946 ATCC 55056 0.82 CSW01_12105 carbamoyl-phosphate synthase small subunit 0.86 CSW01_12100 carbamoyl-phosphate synthase large chain 0.84 3
Shewanella amazonensis SB2B 0.79 Sama_2504 carbamoyl phosphate synthase small subunit (RefSeq) 0.84 Sama_2503 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.98 1
Shewanella loihica PV-4 0.78 Shew_2839 carbamoyl phosphate synthase small subunit (RefSeq) 0.83 Shew_2838 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.99 1
Shewanella oneidensis MR-1 0.76 SO1141 carA carbamoyl-phosphate synthase, small subunit (NCBI ptt file) 0.83 SO1142 carB carbamoyl-phosphate synthase, large subunit (NCBI ptt file) 0.99 1
Shewanella sp. ANA-3 0.74 Shewana3_0967 carbamoyl phosphate synthase small subunit (RefSeq) 0.83 Shewana3_0968 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.99 1
Kangiella aquimarina DSM 16071 0.73 B158DRAFT_0615 carbamoyl-phosphate synthase, small subunit 0.73 B158DRAFT_0616 carbamoyl-phosphate synthase, large subunit
Alteromonas macleodii MIT1002 0.72 MIT1002_01466 Carbamoyl-phosphate synthase small chain 0.79 MIT1002_01467 Carbamoyl-phosphate synthase large chain 0.99 2
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_05635 carbamoyl phosphate synthase small subunit 0.74 AO353_05630 carbamoyl phosphate synthase large subunit
Pseudomonas stutzeri RCH2 0.71 Psest_0967 carbamoyl-phosphate synthase, small subunit 0.75 Psest_0968 carbamoyl-phosphate synthase, large subunit
Pseudomonas sp. S08-1 0.71 OH686_17075 Carbamoyl-phosphate synthase small chain 0.75 OH686_17080 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_3365 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.74 Pf6N2E2_3364 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_5100 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.75 PfGW456L13_5099 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_1173 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.74 Pf1N1B4_1172 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_07485 carbamoyl phosphate synthase small subunit 0.74 AO356_07480 carbamoyl phosphate synthase large subunit
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_4192 carbamoyl-phosphate synthase small subunit 0.75 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_4192 carbamoyl-phosphate synthase small subunit 0.75 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas putida KT2440 0.70 PP_4724 Carbamoyl-phosphate synthase small chain 0.74 PP_4723 Carbamoyl-phosphate synthase large chain 0.97 1
Pseudomonas simiae WCS417 0.70 PS417_24045 carbamoyl phosphate synthase small subunit 0.74 PS417_24040 carbamoyl phosphate synthase large subunit
Pseudomonas sp. RS175 0.70 PFR28_00076 Carbamoyl-phosphate synthase small chain 0.75 PFR28_00077 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens SBW25 0.70 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.74 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Marinobacter adhaerens HP15 0.70 HP15_3078 carbamoyl-phosphate synthase small chain 0.73 HP15_3077 carbamoyl-phosphate synthase, large subunit
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.74 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Dechlorosoma suillum PS 0.68 Dsui_3065 carbamoyl-phosphate synthase, small subunit 0.68 Dsui_3064 carbamoyl-phosphate synthase, large subunit
Acinetobacter radioresistens SK82 0.68 MPMX26_00767 Carbamoyl-phosphate synthase small chain 0.72 MPMX26_00766 Carbamoyl-phosphate synthase large chain 0.99 1
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS13520 carbamoyl phosphate synthase small subunit 0.67 RR42_RS13510 carbamoyl phosphate synthase large subunit
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS06920 carbamoyl phosphate synthase small subunit 0.67 HSERO_RS06925 carbamoyl phosphate synthase large subunit
Rhodanobacter denitrificans MT42 0.65 LRK55_RS17850 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.69 LRK55_RS17855 carbamoyl-phosphate synthase large subunit
Lysobacter sp. OAE881 0.65 ABIE51_RS11625 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.69 ABIE51_RS11615 carbamoyl-phosphate synthase large subunit 0.71 3
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.2914.1 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.69 Xcc-8004.2912.1 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS17995 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.69 LRK54_RS18000 carbamoyl-phosphate synthase large subunit
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS14150 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.67 ABZR87_RS14140 carbamoyl-phosphate synthase large subunit
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS05605 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.69 ABZR86_RS05600 carbamoyl-phosphate synthase large subunit
Acidovorax sp. GW101-3H11 0.64 Ac3H11_435 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.67 Ac3H11_436 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Ralstonia solanacearum PSI07 0.64 RPSI07_RS15245 carbamoyl-phosphate synthase small subunit 0.67 RPSI07_RS15255 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum UW163 0.64 UW163_RS15510 carbamoyl-phosphate synthase small subunit 0.67 UW163_RS15500 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS02200 carbamoyl-phosphate synthase small subunit 0.67 RALBFv3_RS02190 carbamoyl-phosphate synthase large subunit
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS04775 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.67 QEN71_RS04780 carbamoyl-phosphate synthase large subunit
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_07300 carbamoyl phosphate synthase small subunit 0.69 OKGIIK_07295 carB carbamoyl-phosphate synthase large subunit 0.79 13
Ralstonia solanacearum GMI1000 0.63 RS_RS07620 carbamoyl-phosphate synthase small subunit 0.67 RS_RS07630 carbamoyl-phosphate synthase large chain
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF4899 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.66 GFF4898 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Variovorax sp. SCN45 0.63 GFF377 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.67 GFF376 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Variovorax sp. OAS795 0.63 ABID97_RS17090 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.67 ABID97_RS17080 carbamoyl-phosphate synthase large subunit
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_04402 carbamoyl-phosphate synthase small subunit 0.67 H281DRAFT_04403 carbamoyl-phosphate synthase large subunit
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS14195 carbamoyl phosphate synthase small subunit 0.67 BPHYT_RS14190 carbamoyl phosphate synthase large subunit 0.80 1
Paraburkholderia graminis OAS925 0.62 ABIE53_003005 carbamoyl-phosphate synthase small subunit 0.67 ABIE53_003004 carbamoyl-phosphate synthase large subunit
Castellaniella sp019104865 MT123 0.59 ABCV34_RS15505 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.66 ABCV34_RS15510 carbamoyl-phosphate synthase large subunit
Azospirillum brasilense Sp245 0.51 AZOBR_RS10920 carbamoyl phosphate synthase small subunit 0.59 AZOBR_RS12895 carbamoyl phosphate synthase large subunit
Azospirillum sp. SherDot2 0.51 MPMX19_00757 Carbamoyl-phosphate synthase small chain 0.58 MPMX19_02299 Carbamoyl-phosphate synthase large chain
Magnetospirillum magneticum AMB-1 0.51 AMB_RS03600 carbamoyl-phosphate synthase small subunit 0.60 AMB_RS03605 carbamoyl-phosphate synthase large subunit
Rhodospirillum rubrum S1H 0.48 Rru_A2885 Carbamoyl-phosphate synthase, small subunit (NCBI) 0.60 Rru_A2886 Carbamoyl-phosphate synthase, large subunit, glutamine-dependent (NCBI) 0.90 8
Rhodopseudomonas palustris CGA009 0.48 TX73_006555 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.59 TX73_021090 carbamoyl-phosphate synthase large subunit
Phaeobacter inhibens DSM 17395 0.48 PGA1_c06670 carbamoyl-phosphate synthase small chain 0.57 PGA1_c24560 carbamoyl-phosphate synthase large chain 0.94 1
Sphingomonas koreensis DSMZ 15582 0.47 Ga0059261_4243 carbamoyl-phosphate synthase, small subunit 0.61 Ga0059261_0007 carbamoyl-phosphate synthase, large subunit
Sinorhizobium meliloti 1021 0.47 SMc01569 carbamoyl phosphate synthase small subunit 0.58 SMc01215 carbamoyl phosphate synthase large subunit 0.96 1
Brevundimonas sp. GW460-12-10-14-LB2 0.47 A4249_RS16140 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.58 A4249_RS00725 carbamoyl-phosphate synthase large subunit
Dinoroseobacter shibae DFL-12 0.47 Dshi_2387 carbamoyl-phosphate synthase, small subunit (RefSeq) 0.59 Dshi_2639 carbamoyl-phosphate synthase, large subunit (RefSeq)
Bosea sp. OAE506 0.47 ABIE41_RS11975 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.57 ABIE41_RS11910 carbamoyl-phosphate synthase large subunit
Rhizobium sp. OAE497 0.45 ABIE40_RS12765 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.58 ABIE40_RS12815 carbamoyl-phosphate synthase large subunit
Agrobacterium fabrum C58 0.45 Atu2170 carbamoylphosphate synthase small chain 0.58 Atu2178 carbamoylphosphate synthase large subunit
Caulobacter crescentus NA1000 0.45 CCNA_02925 carbamoyl-phosphate synthase small chain 0.59 CCNA_02994 carbamoyl-phosphate synthase large chain
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_02925 carbamoyl-phosphate synthase small chain 0.59 CCNA_02994 carbamoyl-phosphate synthase large chain 0.72 14
Synechococcus elongatus PCC 7942 0.45 Synpcc7942_2122 carA carbamoyl phosphate synthase small subunit 0.57 Synpcc7942_0711 carB carbamoyl phosphate synthase large subunit
Fusobacterium nucleatum SB010 0.40 HUW76_08755 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.46 HUW76_08750 carbamoyl-phosphate synthase large subunit 0.92 17
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS15240 carbamoyl phosphate synthase small subunit 0.43 CA265_RS20080 carbamoyl phosphate synthase large subunit
Pontibacter actiniarum KMM 6156, DSM 19842 0.39 CA264_19490 carbamoyl phosphate synthase small subunit 0.42 CA264_15430 carbamoyl phosphate synthase large subunit low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.39 ABZR88_RS17830 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.44 ABZR88_RS20475 carbamoyl-phosphate synthase large subunit
Desulfovibrio vulgaris Hildenborough JW710 0.39 DVU3113 carA carbamoyl-phosphate synthase, small subunit (TIGR) 0.58 DVU0162 carB carbamoyl-phosphate synthase, large subunit (TIGR)
Bifidobacterium breve UCC2003 0.39 BBR_RS13630 carbamoyl-phosphate synthase small subunit 0.49 BBR_RS13635 carbamoyl-phosphate synthase large subunit 0.96 1
Echinicola vietnamensis KMM 6221, DSM 17526 0.38 Echvi_0226 carbamoyl-phosphate synthase, small subunit 0.43 Echvi_0768 carbamoyl-phosphate synthase, large subunit
Methanococcus maripaludis JJ 0.37 MMJJ_RS06195 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.48 MMJJ_RS09140 carbamoyl-phosphate synthase large subunit
Desulfovibrio vulgaris Miyazaki F 0.37 DvMF_2370 carbamoyl phosphate synthase small subunit (RefSeq) 0.56 DvMF_2306 carbamoyl-phosphate synthase, large subunit (RefSeq) 0.94 1
Methanococcus maripaludis S2 0.37 MMP_RS08170 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.48 MMP_RS05240 carbamoyl-phosphate synthase large subunit
Mycobacterium tuberculosis H37Rv 0.36 Rv1383 Probable carbamoyl-phosphate synthase small chain CarA (carbamoyl-phosphate synthetase glutamine chain) 0.49 Rv1384 Probable carbamoyl-phosphate synthase large chain CarB (carbamoyl-phosphate synthetase ammonia chain)
Bacteroides ovatus ATCC 8483 0.34 BACOVA_03753 carbamoyl-phosphate synthase, small subunit 0.35 BACOVA_03752 carbamoyl-phosphate synthase, large subunit 0.76 1
Phocaeicola dorei CL03T12C01 0.34 ABI39_RS20670 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.36 ABI39_RS20665 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit 0.96 1
Phocaeicola vulgatus CL09T03C04 0.34 HMPREF1058_RS06875 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.36 HMPREF1058_RS06870 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit 0.99 1
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS01295 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.35 HMPREF1078_RS01300 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 61
Bacteroides stercoris CC31F 0.33 HMPREF1181_RS16070 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.35 HMPREF1181_RS16075 carbamoyl-phosphate synthase large subunit low > 56
Bacteroides thetaiotaomicron VPI-5482 0.33 BT0556 carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) 0.36 BT0557 carbamyl phosphate synthetase (NCBI ptt file) 0.93 1

Not shown: 0 genomes with orthologs for DZA65_RS19385 only; 0 genomes with orthologs for DZA65_RS19380 only