Conservation of cofitness between DZA65_RS19385 and DZA65_RS01255 in Dickeya dianthicola ME23

103 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS19385 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 1.0 DZA65_RS01255 phosphoribosylamine--glycine ligase 0.84 12
Dickeya dianthicola 67-19 1.00 HGI48_RS18245 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.99 HGI48_RS01210 phosphoribosylamine--glycine ligase 0.85 8
Dickeya dadantii 3937 0.95 DDA3937_RS18310 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.97 DDA3937_RS01215 phosphoribosylamine--glycine ligase 0.92 2
Pectobacterium carotovorum WPP14 0.93 HER17_RS02895 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.88 HER17_RS20340 phosphoribosylamine--glycine ligase 0.92 48
Rahnella sp. WP5 0.91 EX31_RS03835 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.84 EX31_RS16855 phosphoribosylamine--glycine ligase 0.92 48
Klebsiella michiganensis M5al 0.89 BWI76_RS04465 carbamoyl-phosphate synthase small subunit 0.82 BWI76_RS01610 phosphoribosylamine--glycine ligase 0.58 13
Enterobacter asburiae PDN3 0.88 EX28DRAFT_3637 carbamoyl-phosphate synthase, small subunit 0.82 EX28DRAFT_4544 phosphoribosylamine--glycine ligase (EC 6.3.4.13)
Escherichia coli BW25113 0.88 b0032 carA carbamoyl-phosphate synthase small subunit (NCBI) 0.83 b4005 purD phosphoribosylamine--glycine ligase (NCBI) 0.84 35
Escherichia coli HS(pFamp)R (ATCC 700891) 0.88 OHPLBJKB_03625 Carbamoyl-phosphate synthase small chain 0.84 OHPLBJKB_04044 Phosphoribosylamine--glycine ligase 0.64 9
Serratia liquefaciens MT49 0.88 IAI46_03190 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.86 IAI46_01360 phosphoribosylamine--glycine ligase 0.63 64
Escherichia coli BL21 0.88 ECD_00036 carbamoyl phosphate synthetase small subunit, glutamine amidotransferase 0.83 ECD_03882 phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase 0.86 6
Escherichia coli ECRC102 0.88 NIAGMN_08795 carA carbamoyl phosphate synthase small subunit 0.83 NIAGMN_11065 purD Phosphoribosylamine--glycine ligase
Escherichia coli ECRC99 0.88 KEDOAH_17210 carA carbamoyl phosphate synthase small subunit 0.83 KEDOAH_14845 purD Phosphoribosylamine--glycine ligase
Escherichia coli ECRC98 0.88 JDDGAC_14540 carA carbamoyl phosphate synthase small subunit 0.83 JDDGAC_16940 purD Phosphoribosylamine--glycine ligase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF214 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.83 GFF4187 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) low > 78
Escherichia coli ECRC101 0.88 MCAODC_01460 carA carbamoyl phosphate synthase small subunit 0.83 MCAODC_03815 purD Phosphoribosylamine--glycine ligase low > 87
Escherichia coli ECRC100 0.88 OKFHMN_10945 carA carbamoyl phosphate synthase small subunit 0.83 OKFHMN_13315 purD Phosphoribosylamine--glycine ligase 0.86 31
Escherichia coli ECOR38 0.88 HEPCGN_08930 carA carbamoyl phosphate synthase small subunit 0.83 HEPCGN_11955 purD Phosphoribosylamine--glycine ligase 0.85 33
Escherichia coli ECRC62 0.88 BNILDI_08325 carA carbamoyl phosphate synthase small subunit 0.83 BNILDI_06060 purD Phosphoribosylamine--glycine ligase 0.93 11
Escherichia coli ECOR27 0.88 NOLOHH_03275 carA carbamoyl phosphate synthase small subunit 0.84 NOLOHH_05460 purD Phosphoribosylamine--glycine ligase 0.96 2
Escherichia coli Nissle 1917 0.88 ECOLIN_RS00175 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.83 ECOLIN_RS23095 phosphoribosylamine--glycine ligase 0.71 43
Escherichia fergusonii Becca 0.88 EFB2_04013 Carbamoyl-phosphate synthase small chain 0.83 EFB2_04605 Phosphoribosylamine--glycine ligase low > 86
Enterobacter sp. TBS_079 0.85 MPMX20_00739 Carbamoyl-phosphate synthase small chain 0.83 MPMX20_00225 Phosphoribosylamine--glycine ligase 0.88 14
Pantoea sp. MT58 0.84 IAI47_16120 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.84 IAI47_18045 phosphoribosylamine--glycine ligase 0.86 42
Erwinia tracheiphila SCR3 0.84 LU632_RS02755 carA glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.82 LU632_RS01015 purD phosphoribosylamine--glycine ligase 0.92 8
Vibrio cholerae E7946 ATCC 55056 0.82 CSW01_12105 carbamoyl-phosphate synthase small subunit 0.79 CSW01_01415 phosphoribosylamine--glycine ligase low > 62
Shewanella amazonensis SB2B 0.79 Sama_2504 carbamoyl phosphate synthase small subunit (RefSeq) 0.71 Sama_0394 phosphoribosylamine--glycine ligase (RefSeq) 0.78 22
Shewanella loihica PV-4 0.78 Shew_2839 carbamoyl phosphate synthase small subunit (RefSeq) 0.67 Shew_3413 phosphoribosylamine--glycine ligase (RefSeq) 0.90 21
Shewanella oneidensis MR-1 0.76 SO1141 carA carbamoyl-phosphate synthase, small subunit (NCBI ptt file) 0.69 SO0441 purD phosphoribosylamine--glycine ligase (NCBI ptt file) 0.92 9
Shewanella sp. ANA-3 0.74 Shewana3_0967 carbamoyl phosphate synthase small subunit (RefSeq) 0.70 Shewana3_0440 phosphoribosylamine--glycine ligase (RefSeq) 0.92 23
Kangiella aquimarina DSM 16071 0.73 B158DRAFT_0615 carbamoyl-phosphate synthase, small subunit 0.70 B158DRAFT_0167 phosphoribosylamine--glycine ligase (EC 6.3.4.13)
Alteromonas macleodii MIT1002 0.72 MIT1002_01466 Carbamoyl-phosphate synthase small chain 0.73 MIT1002_03961 Phosphoribosylamine--glycine ligase 0.96 32
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_05635 carbamoyl phosphate synthase small subunit 0.74 AO353_13645 phosphoribosylamine--glycine ligase
Pseudomonas stutzeri RCH2 0.71 Psest_0967 carbamoyl-phosphate synthase, small subunit 0.74 Psest_1013 phosphoribosylamine--glycine ligase
Pseudomonas sp. S08-1 0.71 OH686_17075 Carbamoyl-phosphate synthase small chain 0.75 OH686_07625 Phosphoribosylamine--glycine ligase
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_3365 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.74 Pf6N2E2_3520 Phosphoribosylamine--glycine ligase (EC 6.3.4.13)
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_5100 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.73 PfGW456L13_58 Phosphoribosylamine--glycine ligase (EC 6.3.4.13)
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_1173 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.73 Pf1N1B4_1316 Phosphoribosylamine--glycine ligase (EC 6.3.4.13)
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_07485 carbamoyl phosphate synthase small subunit 0.73 AO356_08230 phosphoribosylamine--glycine ligase
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_4192 carbamoyl-phosphate synthase small subunit 0.73 Psyr_4407 phosphoribosylamine--glycine ligase
Pseudomonas putida KT2440 0.70 PP_4724 Carbamoyl-phosphate synthase small chain 0.75 PP_4823 Phosphoribosylamine--glycine ligase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_4192 carbamoyl-phosphate synthase small subunit 0.73 Psyr_4407 phosphoribosylamine--glycine ligase
Pseudomonas simiae WCS417 0.70 PS417_24045 carbamoyl phosphate synthase small subunit 0.72 PS417_02935 phosphoribosylamine--glycine ligase
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.73 PFLU_RS03010 phosphoribosylamine--glycine ligase
Pseudomonas fluorescens SBW25 0.70 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.73 PFLU_RS03010 phosphoribosylamine--glycine ligase
Marinobacter adhaerens HP15 0.70 HP15_3078 carbamoyl-phosphate synthase small chain 0.76 HP15_3228 phosphoribosylamine-glycine ligase
Pseudomonas sp. RS175 0.70 PFR28_00076 Carbamoyl-phosphate synthase small chain 0.73 PFR28_05213 Phosphoribosylamine--glycine ligase
Dechlorosoma suillum PS 0.68 Dsui_3065 carbamoyl-phosphate synthase, small subunit 0.63 Dsui_1596 phosphoribosylamine--glycine ligase
Acinetobacter radioresistens SK82 0.68 MPMX26_00767 Carbamoyl-phosphate synthase small chain 0.64 MPMX26_01140 Phosphoribosylamine--glycine ligase 0.71 36
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS13520 carbamoyl phosphate synthase small subunit 0.55 RR42_RS04730 phosphoribosylamine--glycine ligase
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS06920 carbamoyl phosphate synthase small subunit 0.59 HSERO_RS17755 phosphoribosylamine--glycine ligase
Rhodanobacter denitrificans MT42 0.65 LRK55_RS17850 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.61 LRK55_RS09805 phosphoribosylamine--glycine ligase
Lysobacter sp. OAE881 0.65 ABIE51_RS11625 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.62 ABIE51_RS17770 phosphoribosylamine--glycine ligase 0.53 62
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.2914.1 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.66 Xcc-8004.657.1 Phosphoribosylamine--glycine ligase (EC 6.3.4.13)
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS17995 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.61 LRK54_RS10165 phosphoribosylamine--glycine ligase
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS14150 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.57 ABZR87_RS15410 phosphoribosylamine--glycine ligase
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS05605 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.62 ABZR86_RS13850 phosphoribosylamine--glycine ligase
Ralstonia solanacearum PSI07 0.64 RPSI07_RS15245 carbamoyl-phosphate synthase small subunit 0.57 RPSI07_RS13680 phosphoribosylamine--glycine ligase
Acidovorax sp. GW101-3H11 0.64 Ac3H11_435 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.59 Ac3H11_2421 Phosphoribosylamine--glycine ligase (EC 6.3.4.13)
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS04775 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.58 QEN71_RS24400 phosphoribosylamine--glycine ligase
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS02200 carbamoyl-phosphate synthase small subunit 0.57 RALBFv3_RS03545 phosphoribosylamine--glycine ligase
Ralstonia solanacearum UW163 0.64 UW163_RS15510 carbamoyl-phosphate synthase small subunit 0.57 UW163_RS10125 phosphoribosylamine--glycine ligase
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_07300 carbamoyl phosphate synthase small subunit 0.61 OKGIIK_13750 purD phosphoribosylamine--glycine ligase low > 52
Ralstonia solanacearum GMI1000 0.63 RS_RS07620 carbamoyl-phosphate synthase small subunit 0.58 RS_RS10995 phosphoribosylamine--glycine ligase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF4899 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.58 GFF4524 Phosphoribosylamine--glycine ligase (EC 6.3.4.13)
Variovorax sp. SCN45 0.63 GFF377 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.58 GFF302 Phosphoribosylamine--glycine ligase (EC 6.3.4.13)
Variovorax sp. OAS795 0.63 ABID97_RS17090 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.57 ABID97_RS16735 phosphoribosylamine--glycine ligase
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_04402 carbamoyl-phosphate synthase small subunit 0.59 H281DRAFT_04521 phosphoribosylamine--glycine ligase
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS14195 carbamoyl phosphate synthase small subunit 0.58 BPHYT_RS06405 phosphoribosylamine--glycine ligase 0.74 2
Paraburkholderia graminis OAS925 0.62 ABIE53_003005 carbamoyl-phosphate synthase small subunit 0.58 ABIE53_001545 phosphoribosylamine--glycine ligase
Castellaniella sp019104865 MT123 0.59 ABCV34_RS15505 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.58 ABCV34_RS02550 phosphoribosylamine--glycine ligase
Azospirillum brasilense Sp245 0.51 AZOBR_RS10920 carbamoyl phosphate synthase small subunit 0.51 AZOBR_RS04470 phosphoribosylamine--glycine ligase
Azospirillum sp. SherDot2 0.51 MPMX19_00757 Carbamoyl-phosphate synthase small chain 0.52 MPMX19_01630 Phosphoribosylamine--glycine ligase
Magnetospirillum magneticum AMB-1 0.51 AMB_RS03600 carbamoyl-phosphate synthase small subunit 0.52 AMB_RS01075 phosphoribosylamine--glycine ligase
Rhodospirillum rubrum S1H 0.48 Rru_A2885 Carbamoyl-phosphate synthase, small subunit (NCBI) 0.48 Rru_A0646 Phosphoribosylamine--glycine ligase (NCBI)
Rhodopseudomonas palustris CGA009 0.48 TX73_006555 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.53 TX73_005965 phosphoribosylamine--glycine ligase
Phaeobacter inhibens DSM 17395 0.48 PGA1_c06670 carbamoyl-phosphate synthase small chain 0.47 PGA1_c23610 phosphoribosylamine--glycine ligase PurD 0.62 46
Sphingomonas koreensis DSMZ 15582 0.47 Ga0059261_4243 carbamoyl-phosphate synthase, small subunit 0.44 Ga0059261_1441 phosphoribosylamine--glycine ligase (EC 6.3.4.13)
Brevundimonas sp. GW460-12-10-14-LB2 0.47 A4249_RS16140 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.41 A4249_RS09255 phosphoribosylamine--glycine ligase
Sinorhizobium meliloti 1021 0.47 SMc01569 carbamoyl phosphate synthase small subunit 0.52 SMc00993 phosphoribosylamine--glycine ligase 0.65 39
Dinoroseobacter shibae DFL-12 0.47 Dshi_2387 carbamoyl-phosphate synthase, small subunit (RefSeq) 0.43 Dshi_2728 phosphoribosylamine--glycine ligase (RefSeq)
Bosea sp. OAE506 0.47 ABIE41_RS11975 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.49 ABIE41_RS23160 phosphoribosylamine--glycine ligase
Rhizobium sp. OAE497 0.45 ABIE40_RS12765 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.52 ABIE40_RS05430 phosphoribosylamine--glycine ligase
Agrobacterium fabrum C58 0.45 Atu2170 carbamoylphosphate synthase small chain 0.53 Atu0647 phosphoribosylamine--glycine ligase
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_02925 carbamoyl-phosphate synthase small chain 0.43 CCNA_00299 phosphoribosylamine--glycine ligase low > 67
Caulobacter crescentus NA1000 0.45 CCNA_02925 carbamoyl-phosphate synthase small chain 0.43 CCNA_00299 phosphoribosylamine--glycine ligase
Synechococcus elongatus PCC 7942 0.45 Synpcc7942_2122 carA carbamoyl phosphate synthase small subunit 0.42 Synpcc7942_0925 purD phosphoribosylamine--glycine ligase
Fusobacterium nucleatum SB010 0.40 HUW76_08755 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.44 HUW76_05205 phosphoribosylamine--glycine ligase low > 35
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS15240 carbamoyl phosphate synthase small subunit 0.38 CA265_RS22605 phosphoribosylamine--glycine ligase
Pontibacter actiniarum KMM 6156, DSM 19842 0.39 CA264_19490 carbamoyl phosphate synthase small subunit 0.42 CA264_20115 phosphoribosylamine--glycine ligase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.39 ABZR88_RS17830 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.44 ABZR88_RS01620 phosphoribosylamine--glycine ligase
Desulfovibrio vulgaris Hildenborough JW710 0.39 DVU3113 carA carbamoyl-phosphate synthase, small subunit (TIGR) 0.49 DVU0488 purD phosphoribosylamine--glycine ligase (TIGR)
Bifidobacterium breve UCC2003 0.39 BBR_RS13630 carbamoyl-phosphate synthase small subunit 0.41 BBR_RS13370 phosphoribosylamine--glycine ligase low > 34
Echinicola vietnamensis KMM 6221, DSM 17526 0.38 Echvi_0226 carbamoyl-phosphate synthase, small subunit 0.44 Echvi_0167 phosphoribosylamine--glycine ligase
Methanococcus maripaludis JJ 0.37 MMJJ_RS06195 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.24 MMJJ_RS03210 phosphoribosylamine--glycine ligase
Desulfovibrio vulgaris Miyazaki F 0.37 DvMF_2370 carbamoyl phosphate synthase small subunit (RefSeq) 0.49 DvMF_1722 phosphoribosylamine--glycine ligase (RefSeq) 0.79 9
Methanococcus maripaludis S2 0.37 MMP_RS08170 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.24 MMP_RS02095 phosphoribosylamine--glycine ligase
Mycobacterium tuberculosis H37Rv 0.36 Rv1383 Probable carbamoyl-phosphate synthase small chain CarA (carbamoyl-phosphate synthetase glutamine chain) 0.34 Rv0772 Probable phosphoribosylamine--glycine ligase PurD (GARS) (glycinamide ribonucleotide synthetase) (phosphoribosylglycinamide synthetase) (5'-phosphoribosylglycinamide synthetase)
Bacteroides ovatus ATCC 8483 0.34 BACOVA_03753 carbamoyl-phosphate synthase, small subunit 0.43 BACOVA_01348 phosphoribosylamine--glycine ligase low > 94
Phocaeicola dorei CL03T12C01 0.34 ABI39_RS20670 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.43 ABI39_RS06055 phosphoribosylamine--glycine ligase low > 72
Phocaeicola vulgatus CL09T03C04 0.34 HMPREF1058_RS06875 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.44 HMPREF1058_RS10995 phosphoribosylamine--glycine ligase low > 67
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS01295 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.46 HMPREF1078_RS06805 phosphoribosylamine--glycine ligase low > 61
Bacteroides stercoris CC31F 0.33 HMPREF1181_RS16070 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.45 HMPREF1181_RS01580 phosphoribosylamine--glycine ligase low > 56
Bacteroides thetaiotaomicron VPI-5482 0.33 BT0556 carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) 0.44 BT3253 phosphoribosylamine--glycine ligase (NCBI ptt file) low > 81

Not shown: 0 genomes with orthologs for DZA65_RS19385 only; 0 genomes with orthologs for DZA65_RS01255 only