Conservation of cofitness between CSW01_07490 and CSW01_12100 in Vibrio cholerae E7946 ATCC 55056

113 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07490 dihydroorotate dehydrogenase (quinone) 1.0 CSW01_12100 carbamoyl-phosphate synthase large chain 0.68 3
Erwinia amylovora T8 0.74 OLJFJH_15990 quinone-dependent dihydroorotate dehydrogenase 0.84 OLJFJH_01395 carbamoyl-phosphate synthase large subunit low > 58
Pantoea sp. MT58 0.74 IAI47_12705 quinone-dependent dihydroorotate dehydrogenase 0.86 IAI47_16115 carbamoyl-phosphate synthase large subunit 0.88 13
Pantoea agglomerans CFBP13505 P0401 0.74 PagCFBP13505_RS04625 quinone-dependent dihydroorotate dehydrogenase 0.85 PagCFBP13505_RS12880 carbamoyl-phosphate synthase large subunit low > 74
Erwinia tracheiphila SCR3 0.73 LU632_RS09955 pyrD quinone-dependent dihydroorotate dehydrogenase 0.85 LU632_RS02750 carB carbamoyl-phosphate synthase large subunit 0.98 1
Enterobacter sp. TBS_079 0.73 MPMX20_01596 Dihydroorotate dehydrogenase (quinone) 0.87 MPMX20_00740 Carbamoyl-phosphate synthase large chain 0.93 5
Erwinia tracheiphila HP pepo 2.2 0.73 IJEDHG_20465 pyrD quinone-dependent dihydroorotate dehydrogenase 0.85 IJEDHG_06145 carB carbamoyl-phosphate synthase large subunit 0.91 6
Enterobacter asburiae PDN3 0.73 EX28DRAFT_1998 dihydroorotate oxidase A (EC 1.3.3.1) 0.87 EX28DRAFT_3638 carbamoyl-phosphate synthase, large subunit
Serratia liquefaciens MT49 0.72 IAI46_08805 quinone-dependent dihydroorotate dehydrogenase 0.85 IAI46_03195 carbamoyl-phosphate synthase large subunit 0.84 9
Escherichia coli ECOR38 0.72 HEPCGN_23225 pyrD quinone-dependent dihydroorotate dehydrogenase 0.87 HEPCGN_08925 carB carbamoyl-phosphate synthase large subunit 0.87 13
Klebsiella pneumoniae MKP103 0.72 KDGMDA_18145 quinone-dependent dihydroorotate dehydrogenase 0.87 KDGMDA_12710 carbamoyl-phosphate synthase large subunit low > 95
Escherichia coli ECRC98 0.72 JDDGAC_08905 pyrD quinone-dependent dihydroorotate dehydrogenase 0.87 JDDGAC_14535 carB carbamoyl-phosphate synthase large subunit low > 87
Escherichia fergusonii Becca 0.72 EFB2_03126 Dihydroorotate dehydrogenase (quinone) 0.87 EFB2_04012 Carbamoyl-phosphate synthase large chain low > 86
Escherichia coli ECOR27 0.72 NOLOHH_21850 pyrD quinone-dependent dihydroorotate dehydrogenase 0.87 NOLOHH_03270 carB carbamoyl-phosphate synthase large subunit 0.93 4
Escherichia coli ECRC101 0.72 MCAODC_24685 pyrD quinone-dependent dihydroorotate dehydrogenase 0.87 MCAODC_01455 carB carbamoyl-phosphate synthase large subunit 0.88 5
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_02721 Dihydroorotate dehydrogenase (quinone) 0.87 OHPLBJKB_03624 Carbamoyl-phosphate synthase large chain 0.71 6
Rahnella sp. WP5 0.72 EX31_RS18095 quinone-dependent dihydroorotate dehydrogenase 0.86 EX31_RS03830 carbamoyl-phosphate synthase large subunit 0.95 1
Escherichia coli ECRC100 0.72 OKFHMN_05295 pyrD quinone-dependent dihydroorotate dehydrogenase 0.87 OKFHMN_10940 carB carbamoyl-phosphate synthase large subunit 0.93 3
Escherichia coli BL21 0.72 ECD_00949 dihydro-orotate oxidase, FMN-linked 0.87 ECD_00037 carbamoyl-phosphate synthase large subunit 0.77 11
Escherichia coli BW25113 0.72 b0945 pyrD dihydroorotate dehydrogenase (NCBI) 0.87 b0033 carB carbamoyl-phosphate synthase large subunit (NCBI) 0.91 6
Escherichia coli ECRC99 0.72 KEDOAH_22440 pyrD quinone-dependent dihydroorotate dehydrogenase 0.87 KEDOAH_17215 carB carbamoyl-phosphate synthase large subunit
Escherichia coli Nissle 1917 0.72 ECOLIN_RS04965 quinone-dependent dihydroorotate dehydrogenase 0.87 ECOLIN_RS00180 carbamoyl-phosphate synthase large subunit
Escherichia coli ECRC62 0.72 BNILDI_20015 pyrD quinone-dependent dihydroorotate dehydrogenase 0.87 BNILDI_08330 carB carbamoyl-phosphate synthase large subunit 0.92 11
Escherichia coli ECRC102 0.72 NIAGMN_03015 pyrD quinone-dependent dihydroorotate dehydrogenase 0.87 NIAGMN_08790 carB carbamoyl-phosphate synthase large subunit 0.90 8
Pectobacterium carotovorum WPP14 0.72 HER17_RS12005 quinone-dependent dihydroorotate dehydrogenase 0.87 HER17_RS02900 carbamoyl-phosphate synthase large subunit 0.97 3
Klebsiella michiganensis M5al 0.71 BWI76_RS09910 dihydroorotate dehydrogenase (quinone) 0.87 BWI76_RS04470 carbamoyl phosphate synthase large subunit 0.85 5
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF3236 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.87 GFF213 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) 0.52 31
Dickeya dadantii 3937 0.71 DDA3937_RS12855 quinone-dependent dihydroorotate dehydrogenase 0.86 DDA3937_RS18305 carbamoyl-phosphate synthase large subunit 0.72 16
Dickeya dianthicola ME23 0.71 DZA65_RS13390 quinone-dependent dihydroorotate dehydrogenase 0.86 DZA65_RS19380 carbamoyl-phosphate synthase large subunit 0.71 39
Dickeya dianthicola 67-19 0.70 HGI48_RS12925 quinone-dependent dihydroorotate dehydrogenase 0.86 HGI48_RS18240 carbamoyl-phosphate synthase large subunit 0.79 12
Shewanella sp. ANA-3 0.65 Shewana3_1786 dihydroorotate dehydrogenase 2 (RefSeq) 0.86 Shewana3_0968 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.91 9
Shewanella amazonensis SB2B 0.64 Sama_1593 dihydroorotate dehydrogenase 2 (RefSeq) 0.87 Sama_2503 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.80 5
Shewanella loihica PV-4 0.64 Shew_1810 dihydroorotate dehydrogenase 2 (RefSeq) 0.87 Shew_2838 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.89 4
Shewanella oneidensis MR-1 0.63 SO2592 pyrD dihydroorotate dehydrogenase (NCBI ptt file) 0.86 SO1142 carB carbamoyl-phosphate synthase, large subunit (NCBI ptt file) 0.92 5
Alteromonas macleodii MIT1002 0.58 MIT1002_02035 Dihydroorotate dehydrogenase (quinone) 0.81 MIT1002_01467 Carbamoyl-phosphate synthase large chain 0.74 44
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_4095 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.76 PfGW456L13_5099 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Dechlorosoma suillum PS 0.58 Dsui_2978 dihydroorotate dehydrogenase, subfamily 2 0.68 Dsui_3064 carbamoyl-phosphate synthase, large subunit
Pseudomonas fluorescens FW300-N1B4 0.58 Pf1N1B4_3842 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.76 Pf1N1B4_1172 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS22765 quinone-dependent dihydroorotate dehydrogenase 0.66 QEN71_RS04780 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_00780 dihydroorotate dehydrogenase (quinone) 0.76 AO353_05630 carbamoyl phosphate synthase large subunit
Pseudomonas sp. DMC3 0.58 GFF5252 Dihydroorotate dehydrogenase (quinone) 0.76 GFF4977 Carbamoyl-phosphate synthase large chain
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS08565 dihydroorotate dehydrogenase 0.66 BPHYT_RS14190 carbamoyl phosphate synthase large subunit 0.78 3
Pseudomonas sp. RS175 0.57 PFR28_01054 Dihydroorotate dehydrogenase (quinone) 0.76 PFR28_00077 Carbamoyl-phosphate synthase large chain
Pseudomonas segetis P6 0.57 MPMX49_03027 Dihydroorotate dehydrogenase (quinone) 0.75 MPMX49_01187 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS22550 quinone-dependent dihydroorotate dehydrogenase 0.76 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens SBW25 0.57 PFLU_RS22550 quinone-dependent dihydroorotate dehydrogenase 0.76 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_2347 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.75 Pf6N2E2_3364 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_02610 dihydroorotate dehydrogenase (quinone) 0.75 AO356_07480 carbamoyl phosphate synthase large subunit
Pseudomonas lactucae CFBP13502 0.57 GEMAOFIL_04332 Dihydroorotate dehydrogenase (quinone) 0.76 GEMAOFIL_04958 Carbamoyl-phosphate synthase large chain
Pseudomonas simiae WCS417 0.57 PS417_20935 dihydroorotate dehydrogenase 0.76 PS417_24040 carbamoyl phosphate synthase large subunit
Methylophilus sp. DMC18 0.57 GFF2704 Dihydroorotate dehydrogenase (quinone) 0.73 GFF312 Carbamoyl-phosphate synthase large chain
Paraburkholderia graminis OAS925 0.56 ABIE53_001954 dihydroorotate dehydrogenase 0.66 ABIE53_003004 carbamoyl-phosphate synthase large subunit
Pseudomonas sp. BP01 0.56 JOY50_RS22105 quinone-dependent dihydroorotate dehydrogenase 0.75 JOY50_RS26765 carB carbamoyl-phosphate synthase large subunit
Pseudomonas sp. S08-1 0.56 OH686_03120 dihydroorotate dehydrogenase (fumarate) 0.75 OH686_17080 Carbamoyl-phosphate synthase large chain
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_2106 dihydroorotate oxidase A 0.76 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_2106 dihydroorotate oxidase A 0.76 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas putida KT2440 0.56 PP_2095 Dihydroorotate dehydrogenase (quinone) 0.75 PP_4723 Carbamoyl-phosphate synthase large chain
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_00743 dihydroorotate oxidase A 0.66 H281DRAFT_04403 carbamoyl-phosphate synthase large subunit
Pseudomonas sp. SVBP6 0.55 COO64_RS05305 quinone-dependent dihydroorotate dehydrogenase 0.75 COO64_RS15240 carB carbamoyl-phosphate synthase large subunit
Pseudomonas aeruginosa PA14 0.55 IKLFDK_15515 quinone-dependent dihydroorotate dehydrogenase 0.76 IKLFDK_29815 carbamoyl-phosphate synthase large subunit
Kangiella aquimarina DSM 16071 0.55 B158DRAFT_2228 dihydroorotate oxidase A (EC 1.3.3.1) 0.73 B158DRAFT_0616 carbamoyl-phosphate synthase, large subunit
Acinetobacter radioresistens SK82 0.54 MPMX26_01120 Dihydroorotate dehydrogenase (quinone) 0.73 MPMX26_00766 Carbamoyl-phosphate synthase large chain 0.98 4
Acinetobacter baumannii LAC-4 0.54 RR41_RS06340 quinone-dependent dihydroorotate dehydrogenase 0.74 RR41_RS04155 carbamoyl-phosphate synthase large subunit
Pseudomonas stutzeri RCH2 0.54 Psest_1947 dihydroorotate dehydrogenase, subfamily 2 0.75 Psest_0968 carbamoyl-phosphate synthase, large subunit
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS13360 quinone-dependent dihydroorotate dehydrogenase 0.67 ABZR87_RS14140 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS01570 quinone-dependent dihydroorotate dehydrogenase 0.67 RALBFv3_RS02190 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum UW163 0.53 UW163_RS14880 quinone-dependent dihydroorotate dehydrogenase 0.67 UW163_RS15500 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum GMI1000 0.53 RS_RS08160 dihydroorotate dehydrogenase (quinone) 0.66 RS_RS07630 carbamoyl-phosphate synthase large chain
Ralstonia solanacearum PSI07 0.53 RPSI07_RS15920 quinone-dependent dihydroorotate dehydrogenase 0.67 RPSI07_RS15255 carbamoyl-phosphate synthase large subunit
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS16155 dihydroorotate dehydrogenase 0.67 HSERO_RS06925 carbamoyl phosphate synthase large subunit
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS07465 dihydroorotate dehydrogenase 0.66 RR42_RS13510 carbamoyl phosphate synthase large subunit
Rhodanobacter denitrificans MT42 0.51 LRK55_RS15740 quinone-dependent dihydroorotate dehydrogenase 0.69 LRK55_RS17855 carbamoyl-phosphate synthase large subunit
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS07450 quinone-dependent dihydroorotate dehydrogenase 0.69 ABZR86_RS05600 carbamoyl-phosphate synthase large subunit
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS15985 quinone-dependent dihydroorotate dehydrogenase 0.69 LRK54_RS18000 carbamoyl-phosphate synthase large subunit
Acidovorax sp. GW101-3H11 0.50 Ac3H11_4100 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.67 Ac3H11_436 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_09010 pyrD quinone-dependent dihydroorotate dehydrogenase 0.69 OKGIIK_07295 carB carbamoyl-phosphate synthase large subunit
Variovorax sp. SCN45 0.50 GFF960 Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) 0.66 GFF376 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF4211 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.66 GFF4898 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Castellaniella sp019104865 MT123 0.49 ABCV34_RS07790 quinone-dependent dihydroorotate dehydrogenase 0.66 ABCV34_RS15510 carbamoyl-phosphate synthase large subunit
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.3032.1 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.69 Xcc-8004.2912.1 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Marinobacter adhaerens HP15 0.49 HP15_1377 dihydroorotate dehydrogenase 0.75 HP15_3077 carbamoyl-phosphate synthase, large subunit
Variovorax sp. OAS795 0.49 ABID97_RS14065 quinone-dependent dihydroorotate dehydrogenase 0.66 ABID97_RS17080 carbamoyl-phosphate synthase large subunit
Rhodanobacter sp000427505 FW510-R12 0.49 LRK53_RS12795 quinone-dependent dihydroorotate dehydrogenase 0.69 LRK53_RS11360 carbamoyl-phosphate synthase large subunit
Lysobacter sp. OAE881 0.48 ABIE51_RS13725 quinone-dependent dihydroorotate dehydrogenase 0.69 ABIE51_RS11615 carbamoyl-phosphate synthase large subunit
Pedobacter sp. GW460-11-11-14-LB5 0.45 CA265_RS14005 dihydroorotate dehydrogenase (quinone) 0.43 CA265_RS20080 carbamoyl phosphate synthase large subunit
Echinicola vietnamensis KMM 6221, DSM 17526 0.43 Echvi_1806 dihydroorotate dehydrogenase, subfamily 2 0.43 Echvi_0768 carbamoyl-phosphate synthase, large subunit
Cellulophaga baltica 18 0.43 M666_RS19110 quinone-dependent dihydroorotate dehydrogenase 0.42 M666_RS18155 carbamoyl-phosphate synthase large subunit 0.63 18
Sinorhizobium meliloti 1021 0.42 SMc02245 dihydroorotate dehydrogenase 2 0.59 SMc01215 carbamoyl phosphate synthase large subunit 0.77 76
Mucilaginibacter yixingensis YX-36 DSM 26809 0.42 ABZR88_RS12040 quinone-dependent dihydroorotate dehydrogenase 0.44 ABZR88_RS20475 carbamoyl-phosphate synthase large subunit
Agrobacterium fabrum C58 0.41 Atu0486 dihydroorotate dehydrogenase 0.58 Atu2178 carbamoylphosphate synthase large subunit
Pontibacter actiniarum KMM 6156, DSM 19842 0.41 CA264_00865 dihydroorotate dehydrogenase (quinone) 0.43 CA264_15430 carbamoyl phosphate synthase large subunit low > 74
Rhizobium sp. OAE497 0.40 ABIE40_RS02420 quinone-dependent dihydroorotate dehydrogenase 0.59 ABIE40_RS12815 carbamoyl-phosphate synthase large subunit
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_1468 dihydroorotate oxidase A (EC 1.3.3.1) 0.60 Ga0059261_0007 carbamoyl-phosphate synthase, large subunit
Rhodopseudomonas palustris CGA009 0.39 TX73_004110 quinone-dependent dihydroorotate dehydrogenase 0.60 TX73_021090 carbamoyl-phosphate synthase large subunit
Rhodospirillum rubrum S1H 0.38 Rru_A0514 Dihydroorotate dehydrogenase 2 (NCBI) 0.61 Rru_A2886 Carbamoyl-phosphate synthase, large subunit, glutamine-dependent (NCBI) 0.87 10
Azospirillum sp. SherDot2 0.38 MPMX19_02083 Dihydroorotate dehydrogenase (quinone) 0.59 MPMX19_02299 Carbamoyl-phosphate synthase large chain
Azospirillum brasilense Sp245 0.38 AZOBR_RS13520 dihydroorotate dehydrogenase 0.59 AZOBR_RS12895 carbamoyl phosphate synthase large subunit
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS00280 quinone-dependent dihydroorotate dehydrogenase 0.59 A4249_RS00725 carbamoyl-phosphate synthase large subunit
Magnetospirillum magneticum AMB-1 0.38 AMB_RS19685 quinone-dependent dihydroorotate dehydrogenase 0.61 AMB_RS03605 carbamoyl-phosphate synthase large subunit
Sphingobium sp. HT1-2 0.37 GFF977 Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) 0.59 GFF2087 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Synechococcus elongatus PCC 7942 0.37 Synpcc7942_0290 pyrD dihydroorotate dehydrogenase 2 0.57 Synpcc7942_0711 carB carbamoyl phosphate synthase large subunit
Bosea sp. OAE506 0.36 ABIE41_RS24065 quinone-dependent dihydroorotate dehydrogenase 0.57 ABIE41_RS11910 carbamoyl-phosphate synthase large subunit
Synechocystis sp000284455 PCC 6803 0.35 SGL_RS17005 quinone-dependent dihydroorotate dehydrogenase 0.57 SGL_RS14530 carbamoyl-phosphate synthase large subunit
Xanthobacter sp. DMC5 0.35 GFF4317 Dihydroorotate dehydrogenase (quinone) 0.60 GFF4681 Carbamoyl-phosphate synthase large chain
Caulobacter crescentus NA1000 0.35 CCNA_00562 dihydroorotate dehydrogenase 0.60 CCNA_02994 carbamoyl-phosphate synthase large chain
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_00562 dihydroorotate dehydrogenase 0.60 CCNA_02994 carbamoyl-phosphate synthase large chain low > 67
Phaeobacter inhibens DSM 17395 0.34 PGA1_c12150 dihydroorotate dehydrogenase PyrD 0.58 PGA1_c24560 carbamoyl-phosphate synthase large chain 0.77 37
Mycobacterium tuberculosis H37Rv 0.32 Rv2139 Probable dihydroorotate dehydrogenase PyrD 0.49 Rv1384 Probable carbamoyl-phosphate synthase large chain CarB (carbamoyl-phosphate synthetase ammonia chain)
Dinoroseobacter shibae DFL-12 0.32 Dshi_0847 Dihydroorotate oxidase (RefSeq) 0.59 Dshi_2639 carbamoyl-phosphate synthase, large subunit (RefSeq) 0.80 12
Bacteroides thetaiotaomicron VPI-5482 0.24 BT1009 dihydroorotate dehydrogenase (NCBI ptt file) 0.36 BT0557 carbamyl phosphate synthetase (NCBI ptt file) 0.29 20
Bifidobacterium breve UCC2003 0.21 BBR_RS12895 quinone-dependent dihydroorotate dehydrogenase 0.49 BBR_RS13635 carbamoyl-phosphate synthase large subunit low > 34
Methanococcus maripaludis JJ 0.13 MMJJ_RS02945 dihydroorotate dehydrogenase 0.48 MMJJ_RS09140 carbamoyl-phosphate synthase large subunit
Methanococcus maripaludis S2 0.12 MMP_RS02330 dihydroorotate dehydrogenase 0.48 MMP_RS05240 carbamoyl-phosphate synthase large subunit
Fusobacterium nucleatum SB010 0.11 HUW76_08740 dihydroorotate dehydrogenase 0.46 HUW76_08750 carbamoyl-phosphate synthase large subunit 0.99 3

Not shown: 0 genomes with orthologs for CSW01_07490 only; 7 genomes with orthologs for CSW01_12100 only