Conservation of cofitness between CSW01_00145 and CSW01_05985 in Vibrio cholerae E7946 ATCC 55056

115 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00145 branched-chain-amino-acid transaminase 1.0 CSW01_05985 thioredoxin-disulfide reductase 0.46 11
Pantoea agglomerans CFBP13505 P0401 0.75 PagCFBP13505_RS20935 branched-chain amino acid transaminase 0.83 PagCFBP13505_RS04410 thioredoxin-disulfide reductase low > 74
Pantoea sp. MT58 0.75 IAI47_01030 branched-chain amino acid transaminase 0.83 IAI47_12920 thioredoxin-disulfide reductase low > 76
Pectobacterium carotovorum WPP14 0.75 HER17_RS01070 branched-chain amino acid transaminase 0.83 HER17_RS12365 thioredoxin-disulfide reductase low > 75
Serratia liquefaciens MT49 0.75 IAI46_24350 branched-chain-amino-acid transaminase 0.83 IAI46_08550 thioredoxin-disulfide reductase low > 87
Klebsiella pneumoniae MKP103 0.75 KDGMDA_09485 branched-chain amino acid transaminase 0.83 KDGMDA_17885 thioredoxin-disulfide reductase low > 95
Dickeya dadantii 3937 0.75 DDA3937_RS20160 branched-chain-amino-acid transaminase 0.82 DDA3937_RS09585 thioredoxin-disulfide reductase low > 74
Rahnella sp. WP5 0.75 EX31_RS15000 branched-chain amino acid transaminase 0.83 EX31_RS18535 thioredoxin-disulfide reductase low > 89
Dickeya dianthicola 67-19 0.74 HGI48_RS20300 branched-chain-amino-acid transaminase 0.82 HGI48_RS09600 thioredoxin-disulfide reductase low > 71
Dickeya dianthicola ME23 0.74 DZA65_RS21340 branched-chain amino acid transaminase 0.81 DZA65_RS09910 thioredoxin-disulfide reductase low > 75
Klebsiella michiganensis M5al 0.74 BWI76_RS00970 branched chain amino acid aminotransferase 0.83 BWI76_RS09645 thioredoxin-disulfide reductase low > 92
Escherichia coli BW25113 0.73 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) 0.83 b0888 trxB thioredoxin reductase, FAD/NAD(P)-binding (NCBI) low > 76
Escherichia coli ECRC62 0.73 BNILDI_04745 ilvE branched-chain-amino-acid transaminase 0.83 BNILDI_20405 trxB thioredoxin-disulfide reductase low > 75
Escherichia coli ECRC102 0.73 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase 0.83 NIAGMN_03300 trxB thioredoxin-disulfide reductase — —
Escherichia coli ECOR38 0.73 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase 0.84 HEPCGN_22930 trxB thioredoxin-disulfide reductase low > 88
Escherichia coli ECRC100 0.73 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase 0.83 OKFHMN_05580 trxB thioredoxin-disulfide reductase — —
Escherichia coli ECOR27 0.73 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase 0.83 NOLOHH_22150 trxB thioredoxin-disulfide reductase — —
Escherichia fergusonii Becca 0.73 EFB2_04866 Branched-chain-amino-acid aminotransferase 0.84 EFB2_03173 Thioredoxin reductase low > 86
Escherichia coli ECRC99 0.73 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase 0.83 KEDOAH_22155 trxB thioredoxin-disulfide reductase — —
Escherichia coli Nissle 1917 0.73 ECOLIN_RS21660 branched-chain-amino-acid transaminase 0.84 ECOLIN_RS04725 thioredoxin-disulfide reductase — —
Escherichia coli ECRC101 0.73 MCAODC_05150 ilvE branched-chain-amino-acid transaminase 0.83 MCAODC_24970 trxB thioredoxin-disulfide reductase — —
Escherichia coli ECRC98 0.73 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase 0.83 JDDGAC_09390 trxB thioredoxin-disulfide reductase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase 0.83 OHPLBJKB_02780 Thioredoxin reductase low > 74
Erwinia tracheiphila HP pepo 2.2 0.73 IJEDHG_09120 ilvE branched-chain amino acid transaminase 0.81 IJEDHG_20210 trxB thioredoxin-disulfide reductase — —
Erwinia tracheiphila SCR3 0.73 LU632_RS24405 branched-chain amino acid transaminase 0.81 LU632_RS09730 trxB thioredoxin-disulfide reductase low > 73
Escherichia coli BL21 0.73 ECD_03648 branched-chain amino acid aminotransferase 0.83 ECD_00892 thioredoxin reductase, FAD/NAD(P)-binding — —
Erwinia amylovora T8 0.73 OLJFJH_06225 branched-chain-amino-acid transaminase 0.80 OLJFJH_16190 thioredoxin-disulfide reductase low > 58
Enterobacter sp. TBS_079 0.73 MPMX20_04500 Branched-chain-amino-acid aminotransferase 0.83 MPMX20_01550 Thioredoxin reductase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.83 GFF4892 Thioredoxin reductase (EC 1.8.1.9) low > 78
Enterobacter asburiae PDN3 0.72 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I 0.82 EX28DRAFT_2044 thioredoxin-disulfide reductase — —
Shewanella loihica PV-4 0.67 Shew_0291 branched-chain amino acid aminotransferase (RefSeq) 0.84 Shew_2028 thioredoxin reductase (RefSeq) — —
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS15965 branched-chain amino acid transaminase 0.68 ABZR86_RS01805 thioredoxin-disulfide reductase — —
Rhodanobacter sp000427505 FW510-R12 0.54 LRK53_RS03115 branched-chain amino acid transaminase 0.72 LRK53_RS11755 thioredoxin-disulfide reductase — —
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_11840 ilvE branched-chain amino acid transaminase 0.72 OKGIIK_07630 trxB thioredoxin-disulfide reductase — —
Rhodanobacter denitrificans MT42 0.54 LRK55_RS09980 branched-chain amino acid transaminase 0.72 LRK55_RS17485 thioredoxin-disulfide reductase — —
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS10340 branched-chain amino acid transaminase 0.72 LRK54_RS17260 thioredoxin-disulfide reductase — —
Lysobacter sp. OAE881 0.53 ABIE51_RS16505 branched-chain amino acid transaminase 0.74 ABIE51_RS11465 thioredoxin-disulfide reductase — —
Acidovorax sp. GW101-3H11 0.47 Ac3H11_3369 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.73 Ac3H11_1700 Thioredoxin reductase (EC 1.8.1.9) — —
Ralstonia solanacearum PSI07 0.47 RPSI07_RS21175 branched-chain amino acid transaminase 0.69 RPSI07_RS13185 thioredoxin-disulfide reductase — —
Dechlorosoma suillum PS 0.47 Dsui_3339 branched-chain amino acid aminotransferase, group I 0.73 Dsui_1689 thioredoxin-disulfide reductase — —
Ralstonia solanacearum GMI1000 0.46 RS_RS02840 branched-chain amino acid transaminase 0.70 RS_RS11755 thioredoxin-disulfide reductase — —
Ralstonia solanacearum UW163 0.46 UW163_RS01455 branched-chain amino acid transaminase 0.69 UW163_RS09505 thioredoxin-disulfide reductase — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS12155 branched-chain amino acid transaminase 0.69 RALBFv3_RS04165 thioredoxin-disulfide reductase — —
Pseudomonas segetis P6 0.46 MPMX49_04209 Branched-chain-amino-acid aminotransferase 0.77 MPMX49_02537 Glucosaminate ammonia-lyase low > 75
Pseudomonas aeruginosa PA14 0.45 IKLFDK_28470 branched-chain-amino-acid transaminase 0.77 IKLFDK_13130 thioredoxin-disulfide reductase low > 98
Pseudomonas aeruginosa PUPa3 0.45 DQ20_RS51190 ilvE;go_function=branched-chain-amino-acid branched-chain-amino-acid transaminase 0.77 DQ20_RS35165 trxB;go_function=thioredoxin-disulfide thioredoxin-disulfide reductase low > 101
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS03330 branched-chain amino acid aminotransferase 0.73 HSERO_RS09495 thioredoxin reductase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF1835 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.75 GFF773 Thioredoxin reductase (EC 1.8.1.9) — —
Pseudomonas aeruginosa MRSN321 0.45 DY961_RS10870 ilvE;go_function=branched-chain-amino-acid branched-chain-amino-acid transaminase 0.77 DY961_RS04140 trxB;go_function=thioredoxin-disulfide thioredoxin-disulfide reductase 0.36 31
Pseudomonas sp. S08-1 0.45 OH686_09695 branched-chain amino acid aminotransferase 0.78 OH686_00255 thioredoxin-disulfide reductase low > 80
Pseudomonas stutzeri RCH2 0.45 Psest_0450 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.76 Psest_2031 thioredoxin-disulfide reductase — —
Paraburkholderia graminis OAS925 0.45 ABIE53_003432 branched-chain amino acid aminotransferase 0.72 ABIE53_001285 thioredoxin reductase (NADPH) — —
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_04193 branched chain amino acid aminotransferase apoenzyme 0.71 H281DRAFT_00173 thioredoxin reductase (NADPH) — —
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS02410 branched-chain amino acid transaminase 0.71 QEN71_RS03380 thioredoxin-disulfide reductase — —
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS16285 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.71 BPHYT_RS05070 thioredoxin reductase — —
Methylophilus sp. DMC18 0.44 GFF2600 Branched-chain-amino-acid aminotransferase 0.74 GFF347 Thioredoxin reductase — —
Marinobacter adhaerens HP15 0.44 HP15_436 branched-chain-amino-acid aminotransferase 0.74 HP15_2076 secreted protein containing thioredoxin reductase domain — —
Castellaniella sp019104865 MT123 0.43 ABCV34_RS07930 branched-chain amino acid transaminase 0.71 ABCV34_RS07235 thioredoxin-disulfide reductase — —
Variovorax sp. SCN45 0.43 GFF5079 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.74 GFF6038 Thioredoxin reductase (EC 1.8.1.9) — —
Variovorax sp. OAS795 0.43 ABID97_RS03790 branched-chain amino acid transaminase 0.73 ABID97_RS07815 thioredoxin-disulfide reductase — —
Acinetobacter baumannii LAC-4 0.42 RR41_RS02965 branched-chain amino acid transaminase 0.70 RR41_RS14910 thioredoxin-disulfide reductase — —
Acinetobacter radioresistens SK82 0.41 MPMX26_00445 Branched-chain-amino-acid aminotransferase 0.73 MPMX26_02425 Thioredoxin reductase low > 36
Rhodospirillum rubrum S1H 0.33 Rru_A2223 Branched-chain amino acid aminotransferase I (NCBI) 0.51 Rru_A2898 Thioredoxin reductase (NCBI) — —
Magnetospirillum magneticum AMB-1 0.32 AMB_RS02850 branched-chain amino acid aminotransferase 0.56 AMB_RS03410 thioredoxin-disulfide reductase — —
Xanthobacter sp. DMC5 0.31 GFF1936 Branched-chain-amino-acid aminotransferase 0.51 GFF4684 Thioredoxin reductase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_06940 branched-chain amino acid aminotransferase 0.48 CA264_04890 thioredoxin-disulfide reductase — —
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_03024 branched-chain amino acid aminotransferase 0.54 CCNA_02964 thioredoxin-disulfide reductase — —
Caulobacter crescentus NA1000 0.30 CCNA_03024 branched-chain amino acid aminotransferase 0.54 CCNA_02964 thioredoxin-disulfide reductase — —
Azospirillum brasilense Sp245 0.30 AZOBR_RS16425 branched-chain amino acid aminotransferase 0.54 AZOBR_RS12935 thioredoxin reductase — —
Phaeobacter inhibens DSM 17395 0.29 PGA1_c34110 branched-chain-amino-acid aminotransferase IlvE 0.56 PGA1_c24780 thioredoxin reductase TrxB — —
Methanococcus maripaludis JJ 0.29 MMJJ_RS04725 branched-chain-amino-acid transaminase 0.24 MMJJ_RS00165 F420-dependent thioredoxin reductase low > 28
Methanococcus maripaludis S2 0.29 MMP_RS00760 branched-chain-amino-acid transaminase 0.24 MMP_RS04970 F420-dependent thioredoxin reductase low > 25
Bosea sp. OAE506 0.28 ABIE41_RS11405 branched-chain amino acid aminotransferase 0.55 ABIE41_RS11885 thioredoxin-disulfide reductase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.28 A4249_RS09820 branched-chain amino acid aminotransferase 0.50 A4249_RS00680 thioredoxin-disulfide reductase — —
Bacteroides ovatus ATCC 8483 0.28 BACOVA_03679 branched-chain-amino-acid transaminase 0.48 BACOVA_05140 thioredoxin-disulfide reductase — —
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_4923 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.75 PfGW456L13_4983 Thioredoxin reductase (EC 1.8.1.9) — —
Dinoroseobacter shibae DFL-12 0.27 Dshi_3301 branched-chain amino acid aminotransferase (RefSeq) 0.55 Dshi_2654 thioredoxin reductase (RefSeq) — —
Pedobacter sp. GW460-11-11-14-LB5 0.27 CA265_RS15785 branched-chain-amino-acid transaminase 0.52 CA265_RS10630 thioredoxin-disulfide reductase — —
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS18540 branched-chain amino acid aminotransferase 0.69 ABZR87_RS16065 thioredoxin-disulfide reductase — —
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_3811 branched-chain amino acid aminotransferase, group II 0.52 Ga0059261_4182 thioredoxin-disulfide reductase — —
Mycobacterium tuberculosis H37Rv 0.20 Rv2210c Branched-chain amino acid transaminase IlvE 0.45 Rv3913 Probable thioredoxin reductase TrxB2 (TRXR) (TR) — —
Cupriavidus basilensis FW507-4G11 0.19 RR42_RS25890 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.71 RR42_RS04315 thioredoxin reductase — —
Sinorhizobium meliloti 1021 0.19 SMc02896 branched-chain amino acid aminotransferase 0.53 SMc01224 thioredoxin reductase — —
Pseudomonas syringae pv. syringae B728a 0.18 Psyr_1148 branched chain amino acid aminotransferase apoenzyme 0.76 Psyr_1016 Thioredoxin reductase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.18 Psyr_1148 branched chain amino acid aminotransferase apoenzyme 0.76 Psyr_1016 Thioredoxin reductase — —
Shewanella amazonensis SB2B 0.18 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) 0.86 Sama_1769 thioredoxin reductase (RefSeq) — —
Rhizobium sp. OAE497 0.18 ABIE40_RS11350 branched-chain amino acid aminotransferase 0.54 ABIE40_RS12865 thioredoxin-disulfide reductase — —
Parabacteroides merdae CL09T00C40 0.18 HMPREF1078_RS07855 branched-chain amino acid aminotransferase 0.46 HMPREF1078_RS13710 thioredoxin-disulfide reductase — —
Pseudomonas fluorescens FW300-N1B4 0.17 Pf1N1B4_4476 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.76 Pf1N1B4_1046 Thioredoxin reductase (EC 1.8.1.9) — —
Pseudomonas fluorescens FW300-N2E2 0.17 Pf6N2E2_477 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.76 Pf6N2E2_5268 Thioredoxin reductase (EC 1.8.1.9) — —
Pseudomonas fluorescens SBW25 0.17 PFLU_RS19375 branched-chain amino acid aminotransferase 0.75 PFLU_RS25330 thioredoxin-disulfide reductase — —
Pseudomonas fluorescens SBW25-INTG 0.17 PFLU_RS19375 branched-chain amino acid aminotransferase 0.75 PFLU_RS25330 thioredoxin-disulfide reductase — —
Bacteroides stercoris CC31F 0.17 HMPREF1181_RS06865 branched-chain amino acid aminotransferase 0.46 HMPREF1181_RS05900 thioredoxin-disulfide reductase — —
Xanthomonas campestris pv. campestris strain 8004 0.17 Xcc-8004.4199.1 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.73 Xcc-8004.2750.1 Thioredoxin reductase (EC 1.8.1.9) — —
Pseudomonas fluorescens FW300-N2C3 0.17 AO356_22970 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.76 AO356_16715 thioredoxin reductase — —
Pseudomonas sp. RS175 0.17 PFR28_02449 putative branched-chain-amino-acid aminotransferase 0.76 PFR28_00202 Glucosaminate ammonia-lyase — —
Agrobacterium fabrum C58 0.17 Atu0871 branched-chain-amino-acid aminotransferase 0.53 Atu2185 thioredoxin reductase — —
Azospirillum sp. SherDot2 0.17 MPMX19_02406 Branched-chain-amino-acid aminotransferase 0.53 MPMX19_00232 Thioredoxin reductase — —
Pseudomonas simiae WCS417 0.17 PS417_17565 branched-chain amino acid aminotransferase 0.76 PS417_23515 thioredoxin reductase — —
Pseudomonas orientalis W4I3 0.16 QF045_RS19115 branched-chain amino acid aminotransferase 0.76 QF045_RS25765 thioredoxin-disulfide reductase — —
Pseudomonas lactucae CFBP13502 0.16 GEMAOFIL_03807 Branched-chain-amino-acid aminotransferase 0.76 GEMAOFIL_04854 Glucosaminate ammonia-lyase — —
Pseudomonas sp. BP01 0.16 JOY50_RS06005 branched-chain amino acid aminotransferase 0.75 JOY50_RS19350 trxB thioredoxin-disulfide reductase — —
Bifidobacterium breve UCC2003 0.16 BBR_RS15210 branched-chain amino acid aminotransferase 0.39 BBR_RS20455 thioredoxin-disulfide reductase low > 34
Pseudomonas putida KT2440 0.16 PP_3511 Branched-chain-amino-acid aminotransferase 0.75 PP_0786 thioredoxin reductase — —
Bacteroides thetaiotaomicron VPI-5482 0.16 BT3892 branched-chain amino acid aminotransferase (NCBI ptt file) 0.47 BT4336 thioredoxin reductase (NCBI ptt file) — —
Pseudomonas sp. DMC3 0.16 GFF1604 putative branched-chain-amino-acid aminotransferase 0.75 GFF1857 Glucosaminate ammonia-lyase — —
Rhodopseudomonas palustris CGA009 0.16 TX73_022650 branched-chain amino acid aminotransferase 0.49 TX73_021110 thioredoxin-disulfide reductase — —
Cellulophaga baltica 18 0.16 M666_RS19255 branched-chain amino acid aminotransferase 0.48 M666_RS10735 thioredoxin-disulfide reductase — —
Pseudomonas sp. SVBP6 0.16 COO64_RS09990 branched-chain amino acid aminotransferase 0.75 COO64_RS03515 trxB thioredoxin-disulfide reductase — —
Pseudomonas fluorescens FW300-N2E3 0.16 AO353_26655 branched-chain amino acid aminotransferase 0.76 AO353_05015 thioredoxin reductase — —
Kangiella aquimarina DSM 16071 0.16 B158DRAFT_0078 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 0.78 B158DRAFT_1829 thioredoxin-disulfide reductase — —
Phocaeicola dorei CL03T12C01 0.15 ABI39_RS01415 branched-chain amino acid aminotransferase 0.47 ABI39_RS18240 thioredoxin-disulfide reductase — —
Shewanella sp. ANA-3 0.15 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) 0.84 Shewana3_2047 thioredoxin reductase (RefSeq) low > 73
Phocaeicola vulgatus CL09T03C04 0.15 HMPREF1058_RS02220 branched-chain amino acid aminotransferase 0.47 HMPREF1058_RS05865 thioredoxin-disulfide reductase — —
Shewanella oneidensis MR-1 0.15 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) 0.85 SO2303 trxB thioredoxin reductase (NCBI ptt file) — —
Alteromonas macleodii MIT1002 0.15 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 0.82 MIT1002_01838 Thioredoxin reductase — —

Not shown: 4 genomes with orthologs for CSW01_00145 only; 3 genomes with orthologs for CSW01_05985 only