Conservation of cofitness between BPHYT_RS17380 and BPHYT_RS17690 in Burkholderia phytofirmans PsJN

101 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS17380 ribulose-phosphate 3-epimerase 1.0 BPHYT_RS17690 imidazole glycerol phosphate synthase 0.71 19
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_05717 ribulose-5-phosphate 3-epimerase 0.96 H281DRAFT_05657 imidazole glycerol phosphate synthase subunit hisH
Paraburkholderia graminis OAS925 0.96 ABIE53_003638 ribulose-phosphate 3-epimerase 0.99 ABIE53_003697 glutamine amidotransferase
Paraburkholderia sabiae LMG 24235 0.91 QEN71_RS27540 ribulose-phosphate 3-epimerase 0.96 QEN71_RS27845 imidazole glycerol phosphate synthase subunit HisH
Cupriavidus basilensis FW507-4G11 0.80 RR42_RS18285 ribulose-phosphate 3-epimerase 0.78 RR42_RS18895 imidazole glycerol phosphate synthase
Ralstonia solanacearum IBSBF1503 0.77 RALBFv3_RS06475 ribulose-phosphate 3-epimerase 0.70 RALBFv3_RS06825 imidazole glycerol phosphate synthase subunit HisH
Ralstonia solanacearum UW163 0.77 UW163_RS07150 ribulose-phosphate 3-epimerase 0.70 UW163_RS06790 imidazole glycerol phosphate synthase subunit HisH
Herbaspirillum seropedicae SmR1 0.77 HSERO_RS19425 ribulose-phosphate 3-epimerase 0.78 HSERO_RS20325 IGP synthase, amidotransferase subunit (EC 4.3.2.10) (from data)
Ralstonia solanacearum PSI07 0.77 RPSI07_RS10765 ribulose-phosphate 3-epimerase 0.71 RPSI07_RS10410 imidazole glycerol phosphate synthase subunit HisH
Ralstonia solanacearum GMI1000 0.77 RS_RS14420 ribulose-phosphate 3-epimerase 0.70 RS_RS14770 imidazole glycerol phosphate synthase subunit HisH
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS02130 ribulose-phosphate 3-epimerase 0.72 ABZR87_RS02480 imidazole glycerol phosphate synthase subunit HisH
Dechlorosoma suillum PS 0.75 Dsui_0221 ribulose-phosphate 3-epimerase 0.55 Dsui_1416 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Klebsiella michiganensis M5al 0.74 BWI76_RS26070 ribulose-phosphate 3-epimerase 0.28 BWI76_RS18940 imidazole glycerol phosphate synthase subunit HisH
Serratia liquefaciens MT49 0.74 IAI46_23685 ribulose-phosphate 3-epimerase 0.30 IAI46_08195 imidazole glycerol phosphate synthase subunit HisH low > 86
Dickeya dianthicola ME23 0.73 DZA65_RS20745 ribulose-phosphate 3-epimerase 0.28 DZA65_RS10040 imidazole glycerol phosphate synthase subunit HisH
Dickeya dianthicola 67-19 0.73 HGI48_RS19660 ribulose-phosphate 3-epimerase 0.27 HGI48_RS09730 imidazole glycerol phosphate synthase subunit HisH
Escherichia coli ECRC98 0.73 JDDGAC_20760 dam adenine-specific DNA-methyltransferase 0.27 JDDGAC_28610 hisH imidazole glycerol phosphate synthase subunit HisH
Dickeya dadantii 3937 0.73 DDA3937_RS19530 ribulose-phosphate 3-epimerase 0.28 DDA3937_RS09720 imidazole glycerol phosphate synthase subunit HisH
Escherichia coli BW25113 0.73 b3386 rpe ribulose-phosphate 3-epimerase (NCBI) 0.27 b2023 hisH imidazole glycerol phosphate synthase subunit HisH (NCBI) low > 76
Escherichia coli ECRC62 0.73 BNILDI_02600 dam adenine-specific DNA-methyltransferase 0.27 BNILDI_14725 hisH imidazole glycerol phosphate synthase subunit HisH
Escherichia coli Nissle 1917 0.73 ECOLIN_RS19345 ribulose-phosphate 3-epimerase 0.27 ECOLIN_RS11960 imidazole glycerol phosphate synthase subunit HisH
Escherichia coli ECOR27 0.73 NOLOHH_08920 dam adenine-specific DNA-methyltransferase 0.27 NOLOHH_15815 hisH imidazole glycerol phosphate synthase subunit HisH
Escherichia coli ECRC101 0.73 MCAODC_07660 dam adenine-specific DNA-methyltransferase 0.27 MCAODC_20440 hisH imidazole glycerol phosphate synthase subunit HisH
Escherichia coli ECRC99 0.73 KEDOAH_11010 dam adenine-specific DNA-methyltransferase 0.27 KEDOAH_03650 hisH imidazole glycerol phosphate synthase subunit HisH
Enterobacter asburiae PDN3 0.73 EX28DRAFT_4156 ribulose-phosphate 3-epimerase 0.28 EX28DRAFT_0536 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit low > 76
Escherichia coli ECRC102 0.73 NIAGMN_14900 dam adenine-specific DNA-methyltransferase 0.27 NIAGMN_22445 hisH imidazole glycerol phosphate synthase subunit HisH
Escherichia coli ECRC100 0.73 OKFHMN_17130 dam adenine-specific DNA-methyltransferase 0.27 OKFHMN_24500 hisH imidazole glycerol phosphate synthase subunit HisH
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_00317 Ribulose-phosphate 3-epimerase 0.27 OHPLBJKB_01677 Imidazole glycerol phosphate synthase subunit HisH
Escherichia coli BL21 0.73 ECD_03238 D-ribulose-5-phosphate 3-epimerase 0.27 ECD_01925 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit low > 61
Escherichia fergusonii Becca 0.73 EFB2_00442 Ribulose-phosphate 3-epimerase 0.27 EFB2_01833 Imidazole glycerol phosphate synthase subunit HisH
Escherichia coli ECOR38 0.73 HEPCGN_15950 rpe ribulose-phosphate 3-epimerase 0.27 HEPCGN_03205 hisH imidazole glycerol phosphate synthase subunit HisH 0.58 37
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF633 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.27 GFF3909 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) low > 78
Enterobacter sp. TBS_079 0.72 MPMX20_04275 Ribulose-phosphate 3-epimerase 0.27 MPMX20_03005 Imidazole glycerol phosphate synthase subunit HisH low > 85
Shewanella amazonensis SB2B 0.71 Sama_3362 ribulose-phosphate 3-epimerase (RefSeq) 0.27 Sama_1945 hisH imidazole glycerol phosphate synthase subunit HisH (RefSeq)
Shewanella oneidensis MR-1 0.71 SO0292 rpe ribulose-phosphate 3-epimerase (NCBI ptt file) 0.29 SO2070 hisH amidotransferase HisH (NCBI ptt file)
Shewanella sp. ANA-3 0.71 Shewana3_3888 ribulose-5-phosphate 3-epimerase (RefSeq) 0.29 Shewana3_1850 hisH imidazole glycerol phosphate synthase subunit HisH (RefSeq)
Pectobacterium carotovorum WPP14 0.71 HER17_RS01795 ribulose-phosphate 3-epimerase 0.27 HER17_RS12245 imidazole glycerol phosphate synthase subunit HisH low > 75
Erwinia tracheiphila SCR3 0.71 LU632_RS22850 rpe ribulose-phosphate 3-epimerase 0.30 LU632_RS08930 hisH imidazole glycerol phosphate synthase subunit HisH
Shewanella loihica PV-4 0.70 Shew_0219 ribulose-phosphate 3-epimerase (RefSeq) 0.31 Shew_2201 hisH imidazole glycerol phosphate synthase subunit HisH (RefSeq)
Pantoea sp. MT58 0.70 IAI47_01910 ribulose-phosphate 3-epimerase 0.29 IAI47_07075 imidazole glycerol phosphate synthase subunit HisH
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_4611 ribulose-5-phosphate 3-epimerase 0.42 Psyr_4896 imidazole glycerol phosphate synthase subunit hisH
Rahnella sp. WP5 0.70 EX31_RS04705 ribulose-phosphate 3-epimerase 0.29 EX31_RS11455 imidazole glycerol phosphate synthase subunit HisH
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_13285 ribulose-phosphate 3-epimerase 0.30 CSW01_05765 imidazole glycerol phosphate synthase subunit HisH low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_4611 ribulose-5-phosphate 3-epimerase 0.42 Psyr_4896 imidazole glycerol phosphate synthase subunit hisH
Pseudomonas stutzeri RCH2 0.69 Psest_3652 ribulose-phosphate 3-epimerase 0.42 Psest_0153 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Dyella japonica UNC79MFTsu3.2 0.69 ABZR86_RS12200 ribulose-phosphate 3-epimerase 0.33 ABZR86_RS06715 imidazole glycerol phosphate synthase subunit HisH 0.67 15
Pseudomonas sp. RS175 0.69 PFR28_04049 Ribulose-phosphate 3-epimerase 0.43 PFR28_04930 Imidazole glycerol phosphate synthase subunit HisH
Hydrogenophaga sp. GW460-11-11-14-LB1 0.69 GFF2197 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.60 GFF1311 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
Pseudomonas fluorescens SBW25 0.69 PFLU_RS27390 ribulose-phosphate 3-epimerase 0.43 PFLU_RS01610 imidazole glycerol phosphate synthase subunit HisH
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS27390 ribulose-phosphate 3-epimerase 0.43 PFLU_RS01610 imidazole glycerol phosphate synthase subunit HisH
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_2543 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.43 Pf1N1B4_1626 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
Lysobacter sp. OAE881 0.69 ABIE51_RS04135 ribulose-phosphate 3-epimerase 0.26 ABIE51_RS13310 imidazole glycerol phosphate synthase subunit HisH
Pseudomonas simiae WCS417 0.69 PS417_25735 ribulose-phosphate 3-epimerase 0.43 PS417_01565 imidazole glycerol phosphate synthase
Pseudomonas putida KT2440 0.69 PP_0415 ribulose-5-phosphate 3-epimerase 0.42 PP_0290 Imidazole glycerol phosphate synthase subunit HisH
Castellaniella sp019104865 MT123 0.68 ABCV34_RS10270 ribulose-phosphate 3-epimerase 0.58 ABCV34_RS11240 imidazole glycerol phosphate synthase subunit HisH
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_1215 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.43 PfGW456L13_361 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
Kangiella aquimarina DSM 16071 0.68 B158DRAFT_0267 ribulose-phosphate 3-epimerase 0.21 B158DRAFT_2290 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_14410 ribulose phosphate epimerase 0.43 AO356_09810 imidazole glycerol phosphate synthase subunit HisH
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_4820 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.42 Pf6N2E2_3841 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
Pseudomonas sp. S08-1 0.68 OH686_15115 ribulose-phosphate 3-epimerase 0.42 OH686_14580 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_07240 ribulose phosphate epimerase 0.42 AO353_12075 imidazole glycerol phosphate synthase subunit HisH
Marinobacter adhaerens HP15 0.66 HP15_3286 ribulose-phosphate 3-epimerase-like protein 0.48 HP15_3011 imidazole glycerol phosphate synthase subunit HisH
Azospirillum sp. SherDot2 0.65 MPMX19_02946 Ribulose-phosphate 3-epimerase 0.38 MPMX19_02545 Imidazole glycerol phosphate synthase subunit HisH
Variovorax sp. OAS795 0.65 ABID97_RS04905 ribulose-phosphate 3-epimerase 0.67 ABID97_RS23135 imidazole glycerol phosphate synthase subunit HisH
Variovorax sp. SCN45 0.65 GFF6246 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.67 GFF5350 Imidazole glycerol phosphate synthase amidotransferase subunit HisH
Alteromonas macleodii MIT1002 0.65 MIT1002_00441 Ribulose-phosphate 3-epimerase 0.32 MIT1002_02636 Imidazole glycerol phosphate synthase subunit HisH
Xanthomonas campestris pv. campestris strain 8004 0.64 Xcc-8004.605.1 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.27 Xcc-8004.2945.1 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
Acinetobacter radioresistens SK82 0.64 MPMX26_02569 Ribulose-phosphate 3-epimerase 0.46 MPMX26_02846 Imidazole glycerol phosphate synthase subunit HisH
Rhodanobacter denitrificans MT42 0.64 LRK55_RS11120 ribulose-phosphate 3-epimerase 0.25 LRK55_RS01370 imidazole glycerol phosphate synthase subunit HisH
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS11390 ribulose-phosphate 3-epimerase 0.25 LRK54_RS01590 imidazole glycerol phosphate synthase subunit HisH
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_12435 rpe ribulose-phosphate 3-epimerase 0.25 OKGIIK_04965 hisH imidazole glycerol phosphate synthase subunit HisH
Acidovorax sp. GW101-3H11 0.62 Ac3H11_757 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.67 Ac3H11_4731 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
Rhodospirillum rubrum S1H 0.57 Rru_A2402 Ribulose-phosphate 3-epimerase (NCBI) 0.36 Rru_A3596 Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (NCBI)
Sphingomonas koreensis DSMZ 15582 0.52 Ga0059261_2240 ribulose-phosphate 3-epimerase 0.34 Ga0059261_3124 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Synechococcus elongatus PCC 7942 0.51 Synpcc7942_0604 rpe ribulose-phosphate 3-epimerase 0.38 Synpcc7942_1481 hisH imidazole glycerol phosphate synthase subunit HisH
Brevundimonas sp. GW460-12-10-14-LB2 0.51 A4249_RS13160 ribulose-phosphate 3-epimerase 0.31 A4249_RS10705 imidazole glycerol phosphate synthase subunit HisH
Magnetospirillum magneticum AMB-1 0.50 AMB_RS06980 ribulose-phosphate 3-epimerase 0.36 AMB_RS22935 imidazole glycerol phosphate synthase subunit HisH
Caulobacter crescentus NA1000 0.50 CCNA_00100 Ribulose-5-phosphate 3-epimerase 0.34 CCNA_03851 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_00100 Ribulose-5-phosphate 3-epimerase 0.34 CCNA_03851 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Rhizobium sp. OAE497 0.46 ABIE40_RS10105 ribulose-phosphate 3-epimerase 0.39 ABIE40_RS19450 imidazole glycerol phosphate synthase subunit HisH
Sinorhizobium meliloti 1021 0.46 SMc00511 D-ribulose-5-phosphate 3-epimerase 0.38 SMc02572 imidazole glycerol phosphate synthase subunit HisH low > 103
Agrobacterium fabrum C58 0.46 Atu1839 ribulose-phosphate 3-epimerase 0.36 Atu0041 glutamine amidotransferase
Azospirillum brasilense Sp245 0.45 AZOBR_RS06755 ribulose-phosphate 3-epimerase 0.34 AZOBR_RS01670 imidazole glycerol phosphate synthase
Dinoroseobacter shibae DFL-12 0.45 Dshi_3006 Ribulose-phosphate 3-epimerase (RefSeq) 0.34 Dshi_0795 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (RefSeq)
Desulfovibrio vulgaris Hildenborough JW710 0.44 DVU2531 rpe ribulose-phosphate 3-epimerase (TIGR) 0.32 DVU0285 hisH IGP synthase, amidotransferase subunit (EC 4.3.2.10) (from data)
Rhodopseudomonas palustris CGA009 0.44 TX73_019755 ribulose-phosphate 3-epimerase 0.30 TX73_001615 imidazole glycerol phosphate synthase subunit HisH
Phaeobacter inhibens DSM 17395 0.44 PGA1_c04170 ribulose-phosphate 3-epimerase Rpe 0.33 PGA1_c09320 imidazole glycerol phosphate synthase subunit HisH
Pedobacter sp. GW460-11-11-14-LB5 0.42 CA265_RS08990 ribulose-phosphate 3-epimerase 0.32 CA265_RS19265 imidazole glycerol phosphate synthase subunit HisH
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_21180 ribulose-phosphate 3-epimerase 0.26 CA264_05100 imidazole glycerol phosphate synthase subunit HisH low > 74
Mycobacterium tuberculosis H37Rv 0.39 Rv1408 Probable ribulose-phosphate 3-epimerase Rpe (PPE) (R5P3E) (pentose-5-phosphate 3-epimerase) 0.28 Rv1602 Probable amidotransferase HisH
Desulfovibrio vulgaris Miyazaki F 0.39 DvMF_0977 Ribulose-phosphate 3-epimerase (RefSeq) 0.31 DvMF_2305 hisH IGP synthase, amidotransferase subunit (EC 4.3.2.10) (from data)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.38 ABZR88_RS06500 ribulose-phosphate 3-epimerase 0.29 ABZR88_RS06865 imidazole glycerol phosphate synthase subunit HisH
Echinicola vietnamensis KMM 6221, DSM 17526 0.37 Echvi_3575 ribulose-phosphate 3-epimerase 0.29 Echvi_2514 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.78 41
Bacteroides thetaiotaomicron VPI-5482 0.37 BT3946 ribulose-phosphate 3-epimerase (NCBI ptt file) 0.32 BT1380 imidazole glycerol phosphate synthase subunit hisH (NCBI ptt file)
Bacteroides ovatus ATCC 8483 0.37 BACOVA_01203 ribulose-phosphate 3-epimerase 0.31 BACOVA_00221 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Parabacteroides merdae CL09T00C40 0.37 HMPREF1078_RS00800 ribulose-phosphate 3-epimerase 0.32 HMPREF1078_RS13575 imidazole glycerol phosphate synthase subunit HisH
Bifidobacterium breve UCC2003 0.36 BBR_RS15800 ribulose-phosphate 3-epimerase 0.25 BBR_RS17035 imidazole glycerol phosphate synthase subunit HisH
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS06505 ribulose-phosphate 3-epimerase 0.31 HMPREF1181_RS11080 imidazole glycerol phosphate synthase subunit HisH 0.42 42
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS07710 ribulose-phosphate 3-epimerase 0.30 HMPREF1058_RS06165 imidazole glycerol phosphate synthase subunit HisH
Phocaeicola dorei CL03T12C01 0.35 ABI39_RS00225 ribulose-phosphate 3-epimerase 0.30 ABI39_RS19920 imidazole glycerol phosphate synthase subunit HisH
Methanococcus maripaludis S2 0.35 MMP_RS05755 ribulose-phosphate 3-epimerase 0.39 MMP_RS01385 imidazole glycerol phosphate synthase subunit HisH
Methanococcus maripaludis JJ 0.35 MMJJ_RS08595 ribulose-phosphate 3-epimerase 0.40 MMJJ_RS03990 imidazole glycerol phosphate synthase subunit HisH

Not shown: 1 genomes with orthologs for BPHYT_RS17380 only; 1 genomes with orthologs for BPHYT_RS17690 only