Conservation of cofitness between BPHYT_RS06405 and BPHYT_RS14190 in Burkholderia phytofirmans PsJN

103 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS06405 phosphoribosylamine--glycine ligase 1.0 BPHYT_RS14190 carbamoyl phosphate synthase large subunit 0.89 2
Paraburkholderia graminis OAS925 0.98 ABIE53_001545 phosphoribosylamine--glycine ligase 0.99 ABIE53_003004 carbamoyl-phosphate synthase large subunit
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_04521 phosphoribosylamine--glycine ligase 0.99 H281DRAFT_04403 carbamoyl-phosphate synthase large subunit
Paraburkholderia sabiae LMG 24235 0.92 QEN71_RS24400 phosphoribosylamine--glycine ligase 0.94 QEN71_RS04780 carbamoyl-phosphate synthase large subunit
Herbaspirillum seropedicae SmR1 0.80 HSERO_RS17755 phosphoribosylamine--glycine ligase 0.80 HSERO_RS06925 carbamoyl phosphate synthase large subunit
Ralstonia solanacearum GMI1000 0.78 RS_RS10995 phosphoribosylamine--glycine ligase 0.86 RS_RS07630 carbamoyl-phosphate synthase large chain
Ralstonia sp. UNC404CL21Col 0.78 ABZR87_RS15410 phosphoribosylamine--glycine ligase 0.87 ABZR87_RS14140 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum PSI07 0.77 RPSI07_RS13680 phosphoribosylamine--glycine ligase 0.86 RPSI07_RS15255 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum IBSBF1503 0.76 RALBFv3_RS03545 phosphoribosylamine--glycine ligase 0.87 RALBFv3_RS02190 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum UW163 0.76 UW163_RS10125 phosphoribosylamine--glycine ligase 0.87 UW163_RS15500 carbamoyl-phosphate synthase large subunit
Cupriavidus basilensis FW507-4G11 0.74 RR42_RS04730 phosphoribosylamine--glycine ligase 0.86 RR42_RS13510 carbamoyl phosphate synthase large subunit
Dechlorosoma suillum PS 0.73 Dsui_1596 phosphoribosylamine--glycine ligase 0.78 Dsui_3064 carbamoyl-phosphate synthase, large subunit
Variovorax sp. SCN45 0.72 GFF302 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.77 GFF376 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Variovorax sp. OAS795 0.70 ABID97_RS16735 phosphoribosylamine--glycine ligase 0.78 ABID97_RS17080 carbamoyl-phosphate synthase large subunit
Acidovorax sp. GW101-3H11 0.68 Ac3H11_2421 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.78 Ac3H11_436 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Castellaniella sp019104865 MT123 0.68 ABCV34_RS02550 phosphoribosylamine--glycine ligase 0.76 ABCV34_RS15510 carbamoyl-phosphate synthase large subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF4524 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.77 GFF4898 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_04044 Phosphoribosylamine--glycine ligase 0.68 OHPLBJKB_03624 Carbamoyl-phosphate synthase large chain 0.64 4
Escherichia coli BL21 0.60 ECD_03882 phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase 0.68 ECD_00037 carbamoyl-phosphate synthase large subunit 0.90 7
Escherichia coli Nissle 1917 0.60 ECOLIN_RS23095 phosphoribosylamine--glycine ligase 0.68 ECOLIN_RS00180 carbamoyl-phosphate synthase large subunit 0.79 16
Escherichia fergusonii Becca 0.60 EFB2_04605 Phosphoribosylamine--glycine ligase 0.68 EFB2_04012 Carbamoyl-phosphate synthase large chain low > 86
Pantoea sp. MT58 0.59 IAI47_18045 phosphoribosylamine--glycine ligase 0.68 IAI47_16115 carbamoyl-phosphate synthase large subunit 0.87 14
Escherichia coli ECRC62 0.59 BNILDI_06060 purD Phosphoribosylamine--glycine ligase 0.68 BNILDI_08330 carB carbamoyl-phosphate synthase large subunit 0.93 18
Pseudomonas putida KT2440 0.59 PP_4823 Phosphoribosylamine--glycine ligase 0.69 PP_4723 Carbamoyl-phosphate synthase large chain
Escherichia coli ECOR27 0.59 NOLOHH_05460 purD Phosphoribosylamine--glycine ligase 0.68 NOLOHH_03270 carB carbamoyl-phosphate synthase large subunit 0.97 2
Escherichia coli ECRC100 0.59 OKFHMN_13315 purD Phosphoribosylamine--glycine ligase 0.68 OKFHMN_10940 carB carbamoyl-phosphate synthase large subunit 0.96 5
Escherichia coli ECRC98 0.59 JDDGAC_16940 purD Phosphoribosylamine--glycine ligase 0.68 JDDGAC_14535 carB carbamoyl-phosphate synthase large subunit low > 86
Escherichia coli ECRC102 0.59 NIAGMN_11065 purD Phosphoribosylamine--glycine ligase 0.68 NIAGMN_08790 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECRC101 0.59 MCAODC_03815 purD Phosphoribosylamine--glycine ligase 0.68 MCAODC_01455 carB carbamoyl-phosphate synthase large subunit low > 87
Escherichia coli ECRC99 0.59 KEDOAH_14845 purD Phosphoribosylamine--glycine ligase 0.68 KEDOAH_17215 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECOR38 0.59 HEPCGN_11955 purD Phosphoribosylamine--glycine ligase 0.68 HEPCGN_08925 carB carbamoyl-phosphate synthase large subunit 0.89 22
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF4187 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.68 GFF213 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) low > 78
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0167 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.68 B158DRAFT_0616 carbamoyl-phosphate synthase, large subunit
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_3520 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.70 Pf6N2E2_3364 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_1316 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.69 Pf1N1B4_1172 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Escherichia coli BW25113 0.59 b4005 purD phosphoribosylamine--glycine ligase (NCBI) 0.68 b0033 carB carbamoyl-phosphate synthase large subunit (NCBI) 0.85 14
Klebsiella michiganensis M5al 0.59 BWI76_RS01610 phosphoribosylamine--glycine ligase 0.68 BWI76_RS04470 carbamoyl phosphate synthase large subunit 0.65 71
Pseudomonas sp. RS175 0.59 PFR28_05213 Phosphoribosylamine--glycine ligase 0.70 PFR28_00077 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.70 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_08230 phosphoribosylamine--glycine ligase 0.70 AO356_07480 carbamoyl phosphate synthase large subunit
Pseudomonas fluorescens SBW25 0.58 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.70 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Enterobacter sp. TBS_079 0.58 MPMX20_00225 Phosphoribosylamine--glycine ligase 0.68 MPMX20_00740 Carbamoyl-phosphate synthase large chain 0.90 8
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_01415 phosphoribosylamine--glycine ligase 0.68 CSW01_12100 carbamoyl-phosphate synthase large chain 0.57 3
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_58 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.70 PfGW456L13_5099 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Erwinia tracheiphila SCR3 0.58 LU632_RS01015 purD phosphoribosylamine--glycine ligase 0.68 LU632_RS02750 carB carbamoyl-phosphate synthase large subunit 0.93 5
Acinetobacter radioresistens SK82 0.58 MPMX26_01140 Phosphoribosylamine--glycine ligase 0.69 MPMX26_00766 Carbamoyl-phosphate synthase large chain low > 36
Pseudomonas sp. S08-1 0.58 OH686_07625 Phosphoribosylamine--glycine ligase 0.70 OH686_17080 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_13645 phosphoribosylamine--glycine ligase 0.70 AO353_05630 carbamoyl phosphate synthase large subunit
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_4407 phosphoribosylamine--glycine ligase 0.70 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_4407 phosphoribosylamine--glycine ligase 0.70 Psyr_4191 carbamoyl-phosphate synthase large subunit
Enterobacter asburiae PDN3 0.58 EX28DRAFT_4544 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.68 EX28DRAFT_3638 carbamoyl-phosphate synthase, large subunit
Dickeya dadantii 3937 0.58 DDA3937_RS01215 phosphoribosylamine--glycine ligase 0.69 DDA3937_RS18305 carbamoyl-phosphate synthase large subunit 0.92 3
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.657.1 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.69 Xcc-8004.2912.1 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas stutzeri RCH2 0.58 Psest_1013 phosphoribosylamine--glycine ligase 0.69 Psest_0968 carbamoyl-phosphate synthase, large subunit
Marinobacter adhaerens HP15 0.58 HP15_3228 phosphoribosylamine-glycine ligase 0.70 HP15_3077 carbamoyl-phosphate synthase, large subunit
Pseudomonas simiae WCS417 0.57 PS417_02935 phosphoribosylamine--glycine ligase 0.70 PS417_24040 carbamoyl phosphate synthase large subunit
Dickeya dianthicola ME23 0.57 DZA65_RS01255 phosphoribosylamine--glycine ligase 0.68 DZA65_RS19380 carbamoyl-phosphate synthase large subunit 0.87 7
Dickeya dianthicola 67-19 0.57 HGI48_RS01210 phosphoribosylamine--glycine ligase 0.68 HGI48_RS18240 carbamoyl-phosphate synthase large subunit 0.81 9
Rahnella sp. WP5 0.57 EX31_RS16855 phosphoribosylamine--glycine ligase 0.69 EX31_RS03830 carbamoyl-phosphate synthase large subunit 0.93 37
Lysobacter sp. OAE881 0.57 ABIE51_RS17770 phosphoribosylamine--glycine ligase 0.69 ABIE51_RS11615 carbamoyl-phosphate synthase large subunit low > 62
Pectobacterium carotovorum WPP14 0.57 HER17_RS20340 phosphoribosylamine--glycine ligase 0.68 HER17_RS02900 carbamoyl-phosphate synthase large subunit 0.94 15
Alteromonas macleodii MIT1002 0.56 MIT1002_03961 Phosphoribosylamine--glycine ligase 0.68 MIT1002_01467 Carbamoyl-phosphate synthase large chain 0.96 36
Serratia liquefaciens MT49 0.56 IAI46_01360 phosphoribosylamine--glycine ligase 0.68 IAI46_03195 carbamoyl-phosphate synthase large subunit 0.63 9
Shewanella amazonensis SB2B 0.56 Sama_0394 phosphoribosylamine--glycine ligase (RefSeq) 0.68 Sama_2503 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.76 58
Shewanella sp. ANA-3 0.55 Shewana3_0440 phosphoribosylamine--glycine ligase (RefSeq) 0.68 Shewana3_0968 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.93 7
Shewanella oneidensis MR-1 0.54 SO0441 purD phosphoribosylamine--glycine ligase (NCBI ptt file) 0.68 SO1142 carB carbamoyl-phosphate synthase, large subunit (NCBI ptt file) 0.93 8
Shewanella loihica PV-4 0.53 Shew_3413 phosphoribosylamine--glycine ligase (RefSeq) 0.68 Shew_2838 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.89 10
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS13850 phosphoribosylamine--glycine ligase 0.69 ABZR86_RS05600 carbamoyl-phosphate synthase large subunit
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_13750 purD phosphoribosylamine--glycine ligase 0.69 OKGIIK_07295 carB carbamoyl-phosphate synthase large subunit 0.76 5
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS10165 phosphoribosylamine--glycine ligase 0.70 LRK54_RS18000 carbamoyl-phosphate synthase large subunit
Rhodanobacter denitrificans MT42 0.51 LRK55_RS09805 phosphoribosylamine--glycine ligase 0.70 LRK55_RS17855 carbamoyl-phosphate synthase large subunit
Agrobacterium fabrum C58 0.48 Atu0647 phosphoribosylamine--glycine ligase 0.60 Atu2178 carbamoylphosphate synthase large subunit
Bosea sp. OAE506 0.47 ABIE41_RS23160 phosphoribosylamine--glycine ligase 0.59 ABIE41_RS11910 carbamoyl-phosphate synthase large subunit
Rhizobium sp. OAE497 0.47 ABIE40_RS05430 phosphoribosylamine--glycine ligase 0.59 ABIE40_RS12815 carbamoyl-phosphate synthase large subunit
Azospirillum sp. SherDot2 0.47 MPMX19_01630 Phosphoribosylamine--glycine ligase 0.59 MPMX19_02299 Carbamoyl-phosphate synthase large chain
Rhodopseudomonas palustris CGA009 0.46 TX73_005965 phosphoribosylamine--glycine ligase 0.61 TX73_021090 carbamoyl-phosphate synthase large subunit
Azospirillum brasilense Sp245 0.46 AZOBR_RS04470 phosphoribosylamine--glycine ligase 0.60 AZOBR_RS12895 carbamoyl phosphate synthase large subunit
Sinorhizobium meliloti 1021 0.45 SMc00993 phosphoribosylamine--glycine ligase 0.59 SMc01215 carbamoyl phosphate synthase large subunit 0.71 85
Desulfovibrio vulgaris Hildenborough JW710 0.44 DVU0488 purD phosphoribosylamine--glycine ligase (TIGR) 0.57 DVU0162 carB carbamoyl-phosphate synthase, large subunit (TIGR)
Magnetospirillum magneticum AMB-1 0.44 AMB_RS01075 phosphoribosylamine--glycine ligase 0.62 AMB_RS03605 carbamoyl-phosphate synthase large subunit
Desulfovibrio vulgaris Miyazaki F 0.44 DvMF_1722 phosphoribosylamine--glycine ligase (RefSeq) 0.57 DvMF_2306 carbamoyl-phosphate synthase, large subunit (RefSeq) 0.86 3
Rhodospirillum rubrum S1H 0.43 Rru_A0646 Phosphoribosylamine--glycine ligase (NCBI) 0.62 Rru_A2886 Carbamoyl-phosphate synthase, large subunit, glutamine-dependent (NCBI)
Phaeobacter inhibens DSM 17395 0.43 PGA1_c23610 phosphoribosylamine--glycine ligase PurD 0.58 PGA1_c24560 carbamoyl-phosphate synthase large chain 0.69 37
Caulobacter crescentus NA1000 0.42 CCNA_00299 phosphoribosylamine--glycine ligase 0.60 CCNA_02994 carbamoyl-phosphate synthase large chain
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_00299 phosphoribosylamine--glycine ligase 0.60 CCNA_02994 carbamoyl-phosphate synthase large chain low > 67
Bacteroides stercoris CC31F 0.42 HMPREF1181_RS01580 phosphoribosylamine--glycine ligase 0.35 HMPREF1181_RS16075 carbamoyl-phosphate synthase large subunit low > 56
Dinoroseobacter shibae DFL-12 0.42 Dshi_2728 phosphoribosylamine--glycine ligase (RefSeq) 0.58 Dshi_2639 carbamoyl-phosphate synthase, large subunit (RefSeq) 0.78 19
Bifidobacterium breve UCC2003 0.41 BBR_RS13370 phosphoribosylamine--glycine ligase 0.49 BBR_RS13635 carbamoyl-phosphate synthase large subunit low > 34
Synechococcus elongatus PCC 7942 0.41 Synpcc7942_0925 purD phosphoribosylamine--glycine ligase 0.58 Synpcc7942_0711 carB carbamoyl phosphate synthase large subunit
Echinicola vietnamensis KMM 6221, DSM 17526 0.41 Echvi_0167 phosphoribosylamine--glycine ligase 0.42 Echvi_0768 carbamoyl-phosphate synthase, large subunit
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS10995 phosphoribosylamine--glycine ligase 0.36 HMPREF1058_RS06870 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 67
Bacteroides ovatus ATCC 8483 0.41 BACOVA_01348 phosphoribosylamine--glycine ligase 0.36 BACOVA_03752 carbamoyl-phosphate synthase, large subunit low > 94
Phocaeicola dorei CL03T12C01 0.40 ABI39_RS06055 phosphoribosylamine--glycine ligase 0.36 ABI39_RS20665 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 72
Bacteroides thetaiotaomicron VPI-5482 0.40 BT3253 phosphoribosylamine--glycine ligase (NCBI ptt file) 0.36 BT0557 carbamyl phosphate synthetase (NCBI ptt file) 0.44 64
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_20115 phosphoribosylamine--glycine ligase 0.43 CA264_15430 carbamoyl phosphate synthase large subunit low > 74
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS06805 phosphoribosylamine--glycine ligase 0.36 HMPREF1078_RS01300 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 61
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS09255 phosphoribosylamine--glycine ligase 0.60 A4249_RS00725 carbamoyl-phosphate synthase large subunit
Fusobacterium nucleatum SB010 0.40 HUW76_05205 phosphoribosylamine--glycine ligase 0.47 HUW76_08750 carbamoyl-phosphate synthase large subunit 0.95 16
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_1441 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.60 Ga0059261_0007 carbamoyl-phosphate synthase, large subunit
Mucilaginibacter yixingensis YX-36 DSM 26809 0.39 ABZR88_RS01620 phosphoribosylamine--glycine ligase 0.44 ABZR88_RS20475 carbamoyl-phosphate synthase large subunit
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS22605 phosphoribosylamine--glycine ligase 0.43 CA265_RS20080 carbamoyl phosphate synthase large subunit
Mycobacterium tuberculosis H37Rv 0.32 Rv0772 Probable phosphoribosylamine--glycine ligase PurD (GARS) (glycinamide ribonucleotide synthetase) (phosphoribosylglycinamide synthetase) (5'-phosphoribosylglycinamide synthetase) 0.50 Rv1384 Probable carbamoyl-phosphate synthase large chain CarB (carbamoyl-phosphate synthetase ammonia chain)
Methanococcus maripaludis JJ 0.24 MMJJ_RS03210 phosphoribosylamine--glycine ligase 0.49 MMJJ_RS09140 carbamoyl-phosphate synthase large subunit
Methanococcus maripaludis S2 0.24 MMP_RS02095 phosphoribosylamine--glycine ligase 0.49 MMP_RS05240 carbamoyl-phosphate synthase large subunit

Not shown: 0 genomes with orthologs for BPHYT_RS06405 only; 0 genomes with orthologs for BPHYT_RS14190 only