Conservation of cofitness between BT1860 and BT2077 in Bacteroides thetaiotaomicron VPI-5482

101 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT1860 3-isopropylmalate dehydratase large subunit (NCBI ptt file) 1.0 BT2077 acetolactate synthase large subunit (NCBI ptt file) 0.91 5
Bacteroides ovatus ATCC 8483 0.95 BACOVA_04603 3-isopropylmalate dehydratase, large subunit 0.92 BACOVA_03303 acetolactate synthase, large subunit, biosynthetic type 0.98 3
Bacteroides stercoris CC31F 0.89 HMPREF1181_RS14145 3-isopropylmalate dehydratase large subunit 0.87 HMPREF1181_RS08330 biosynthetic-type acetolactate synthase large subunit 0.94 8
Phocaeicola dorei CL03T12C01 0.88 ABI39_RS10200 3-isopropylmalate dehydratase large subunit 0.85 ABI39_RS12720 biosynthetic-type acetolactate synthase large subunit 0.94 1
Phocaeicola vulgatus CL09T03C04 0.88 HMPREF1058_RS14550 3-isopropylmalate dehydratase large subunit 0.84 HMPREF1058_RS16820 biosynthetic-type acetolactate synthase large subunit low > 67
Parabacteroides merdae CL09T00C40 0.85 HMPREF1078_RS16660 3-isopropylmalate dehydratase large subunit 0.66 HMPREF1078_RS16690 biosynthetic-type acetolactate synthase large subunit 0.92 53
Echinicola vietnamensis KMM 6221, DSM 17526 0.68 Echvi_2059 3-isopropylmalate dehydratase, large subunit 0.56 Echvi_2056 acetolactate synthase, large subunit, biosynthetic type 0.75 8
Pedobacter sp. GW460-11-11-14-LB5 0.65 CA265_RS15830 3-isopropylmalate dehydratase large subunit 0.57 CA265_RS15805 acetolactate synthase, large subunit, biosynthetic type 0.94 13
Pontibacter actiniarum KMM 6156, DSM 19842 0.65 CA264_09435 3-isopropylmalate dehydratase large subunit 0.57 CA264_06930 acetolactate synthase, large subunit, biosynthetic type low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.65 ABZR88_RS11595 3-isopropylmalate dehydratase large subunit 0.58 ABZR88_RS11580 biosynthetic-type acetolactate synthase large subunit
Azospirillum sp. SherDot2 0.56 MPMX19_01998 3-isopropylmalate dehydratase large subunit 0.38 MPMX19_01776 Acetolactate synthase isozyme 3 large subunit
Azospirillum brasilense Sp245 0.56 AZOBR_RS03545 isopropylmalate isomerase 0.37 AZOBR_RS06560 acetolactate synthase low > 97
Rhodospirillum rubrum S1H 0.53 Rru_A1189 3-isopropylmalate dehydratase large subunit region (NCBI) 0.37 Rru_A0467 Acetolactate synthase, large subunit, biosynthetic type (NCBI) 0.95 10
Rhodopseudomonas palustris CGA009 0.53 TX73_001245 3-isopropylmalate dehydratase large subunit 0.37 TX73_010465 acetolactate synthase 3 large subunit
Magnetospirillum magneticum AMB-1 0.53 AMB_RS20560 3-isopropylmalate dehydratase large subunit 0.39 AMB_RS17740 acetolactate synthase 3 large subunit
Rahnella sp. WP5 0.52 EX31_RS03690 3-isopropylmalate dehydratase large subunit 0.41 EX31_RS14990 acetolactate synthase 2 catalytic subunit 0.82 84
Pantoea sp. MT58 0.52 IAI47_16010 3-isopropylmalate dehydratase large subunit 0.41 IAI47_01020 acetolactate synthase 2 catalytic subunit low > 76
Marinobacter adhaerens HP15 0.52 HP15_1834 protein containing 3-isopropylmalate dehydratase, large subunit region domain 0.37 HP15_531 acetolactate synthase, large subunit, biosynthetic type 0.84 16
Pseudomonas syringae pv. syringae B728a 0.52 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.37 Psyr_0846 acetolactate synthase, large subunit 0.93 9
Dickeya dianthicola 67-19 0.52 HGI48_RS18065 3-isopropylmalate dehydratase large subunit 0.42 HGI48_RS20310 acetolactate synthase 2 catalytic subunit low > 71
Pseudomonas syringae pv. syringae B728a ΔmexB 0.52 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.37 Psyr_0846 acetolactate synthase, large subunit 0.89 17
Dickeya dianthicola ME23 0.52 DZA65_RS19210 3-isopropylmalate dehydratase large subunit 0.41 DZA65_RS21350 acetolactate synthase 2 catalytic subunit 0.65 59
Bosea sp. OAE506 0.51 ABIE41_RS11660 3-isopropylmalate dehydratase large subunit 0.37 ABIE41_RS12890 acetolactate synthase 3 large subunit
Dickeya dadantii 3937 0.51 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit 0.42 DDA3937_RS20170 acetolactate synthase 2 catalytic subunit 0.63 64
Sinorhizobium meliloti 1021 0.51 SMc03823 isopropylmalate isomerase large subunit 0.37 SMc01431 acetolactate synthase 3 catalytic subunit 0.97 9
Escherichia fergusonii Becca 0.51 EFB2_03973 3-isopropylmalate dehydratase large subunit 0.43 EFB2_04868 Acetolactate synthase isozyme 2 large subunit low > 86
Pectobacterium carotovorum WPP14 0.51 HER17_RS03075 3-isopropylmalate dehydratase large subunit 0.40 HER17_RS01060 acetolactate synthase 2 catalytic subunit low > 75
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS17605 3-isopropylmalate dehydratase large subunit 0.37 QEN71_RS24225 acetolactate synthase 3 catalytic subunit 0.86 9
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit 0.43 OHPLBJKB_04285 Acetolactate synthase isozyme 2 large subunit low > 73
Escherichia coli ECOR38 0.51 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1 0.43 HEPCGN_13365 ilvG acetolactate synthase 2 catalytic subunit low > 85
Escherichia coli ECOR27 0.51 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1 0.43 NOLOHH_06790 ilvG acetolactate synthase 2 catalytic subunit low > 57
Escherichia coli Nissle 1917 0.51 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit 0.43 ECOLIN_RS21650 acetolactate synthase 2 catalytic subunit low > 52
Escherichia coli BL21 0.51 ECD_00074 3-isopropylmalate dehydratase large subunit 0.42 ECD_03646 acetolactate synthase II, valine insensitive, large subunit low > 60
Escherichia coli BW25113 0.51 b0072 leuC isopropylmalate isomerase large subunit (NCBI) 0.38 b0077 ilvI acetolactate synthase III large subunit (NCBI) low > 76
Escherichia coli ECRC62 0.51 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1 0.43 BNILDI_04735 ilvG acetolactate synthase 2 catalytic subunit
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS14400 isopropylmalate isomerase 0.38 RR42_RS05435 acetolactate synthase 3 catalytic subunit
Serratia liquefaciens MT49 0.51 IAI46_03345 3-isopropylmalate dehydratase large subunit 0.40 IAI46_24360 acetolactate synthase 2 catalytic subunit low > 86
Escherichia coli ECRC101 0.51 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1 0.43 MCAODC_05160 ilvG acetolactate synthase 2 catalytic subunit
Escherichia coli ECRC98 0.51 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1 0.43 JDDGAC_18275 ilvG acetolactate synthase 2 catalytic subunit
Escherichia coli ECRC102 0.51 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1 0.43 NIAGMN_12410 ilvG acetolactate synthase 2 catalytic subunit
Phaeobacter inhibens DSM 17395 0.51 PGA1_c29780 3-isopropylmalate dehydratase large subunit 0.35 PGA1_c20210 acetolactate synthase isozyme 3 large subunit 0.90 8
Escherichia coli ECRC101 0.51 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1 0.43 OKFHMN_14655 ilvG acetolactate synthase 2 catalytic subunit
Escherichia coli ECRC99 0.51 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1 0.43 KEDOAH_13495 ilvG acetolactate synthase 2 catalytic subunit
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS14540 3-isopropylmalate dehydratase large subunit 0.38 ABZR87_RS14955 acetolactate synthase 3 catalytic subunit 0.59 49
Mycobacterium tuberculosis H37Rv 0.51 Rv2988c Probable 3-isopropylmalate dehydratase (large subunit) LeuC (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI) 0.37 Rv3003c Acetolactate synthase (large subunit) IlvB1 (acetohydroxy-acid synthase)
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit 0.39 H281DRAFT_04551 acetolactate synthase, large subunit
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF166 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.43 GFF2904 Acetolactate synthase large subunit (EC 2.2.1.6) low > 78
Castellaniella sp019104865 MT123 0.51 ABCV34_RS04290 3-isopropylmalate dehydratase large subunit 0.38 ABCV34_RS01210 acetolactate synthase 3 catalytic subunit 0.64 4
Pseudomonas simiae WCS417 0.51 PS417_18600 isopropylmalate isomerase 0.36 PS417_23810 acetolactate synthase 3 catalytic subunit 0.90 9
Enterobacter asburiae PDN3 0.51 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit 0.43 EX28DRAFT_4440 acetolactate synthase, large subunit (EC 2.2.1.6) 0.91 15
Shewanella loihica PV-4 0.51 Shew_3470 isopropylmalate isomerase large subunit (RefSeq) 0.40 Shew_0289 acetolactate synthase 2 catalytic subunit (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.51 MIT1002_00947 3-isopropylmalate dehydratase large subunit 0.38 MIT1002_00503 Acetolactate synthase isozyme 3 large subunit 0.99 6
Shewanella oneidensis MR-1 0.51 SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) 0.39 SO4347 ilvG acetolactate synthase II, large subunit (NCBI ptt file) 0.91 50
Shewanella sp. ANA-3 0.51 Shewana3_3759 isopropylmalate isomerase large subunit (RefSeq) 0.39 Shewana3_0356 acetolactate synthase 2 catalytic subunit (RefSeq) low > 73
Pseudomonas sp. RS175 0.50 PFR28_02824 3-isopropylmalate dehydratase large subunit 0.36 PFR28_03699 Acetolactate synthase isozyme 3 large subunit 0.61 16
Ralstonia solanacearum GMI1000 0.50 RS_RS10000 3-isopropylmalate dehydratase large subunit 0.38 RS_RS10420 acetolactate synthase 3 large subunit
Acidovorax sp. GW101-3H11 0.50 Ac3H11_1525 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.35 Ac3H11_525 Acetolactate synthase large subunit (EC 2.2.1.6) 0.80 37
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_4223 3-isopropylmalate dehydratase, large subunit 0.37 Ga0059261_0068 acetolactate synthase, large subunit (EC 2.2.1.6) 0.99 7
Paraburkholderia graminis OAS925 0.50 ABIE53_004801 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit 0.37 ABIE53_001574 acetolactate synthase-1/2/3 large subunit
Enterobacter sp. TBS_079 0.50 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1 0.43 MPMX20_04502 Acetolactate synthase isozyme 2 large subunit 0.62 76
Ralstonia solanacearum UW163 0.50 UW163_RS11105 3-isopropylmalate dehydratase large subunit 0.38 UW163_RS10675 acetolactate synthase 3 large subunit
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS02620 3-isopropylmalate dehydratase large subunit 0.38 RALBFv3_RS03050 acetolactate synthase 3 large subunit
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS20580 3-isopropylmalate dehydratase large subunit 0.37 PFLU_RS25650 acetolactate synthase 3 large subunit
Erwinia tracheiphila SCR3 0.50 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit 0.41 LU632_RS24415 ilvG acetolactate synthase 2 catalytic subunit low > 74
Pseudomonas fluorescens SBW25 0.50 PFLU_RS20580 3-isopropylmalate dehydratase large subunit 0.37 PFLU_RS25650 acetolactate synthase 3 large subunit
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS33915 isopropylmalate isomerase 0.38 BPHYT_RS06545 acetolactate synthase 0.94 4
Pseudomonas stutzeri RCH2 0.50 Psest_2591 3-isopropylmalate dehydratase, large subunit 0.38 Psest_1036 acetolactate synthase, large subunit, biosynthetic type
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF3363 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.37 GFF4276 Acetolactate synthase large subunit (EC 2.2.1.6)
Agrobacterium fabrum C58 0.50 Atu2709 3-isopropylmalate dehydratase, large subunit 0.36 Atu2036 acetolactate synthase III, large subunit 0.88 34
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_21400 isopropylmalate isomerase 0.36 AO356_16170 acetolactate synthase 3 catalytic subunit 0.95 9
Rhizobium sp. OAE497 0.50 ABIE40_RS18380 3-isopropylmalate dehydratase large subunit 0.37 ABIE40_RS11495 acetolactate synthase 3 large subunit 0.90 48
Ralstonia solanacearum PSI07 0.50 RPSI07_RS14695 3-isopropylmalate dehydratase large subunit 0.38 RPSI07_RS14255 acetolactate synthase, large subunit, biosynthetic type
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.36 Pf6N2E2_5175 Acetolactate synthase large subunit (EC 2.2.1.6) 0.80 15
Lysobacter sp. OAE881 0.50 ABIE51_RS17575 3-isopropylmalate dehydratase large subunit 0.41 ABIE51_RS17550 acetolactate synthase 2 catalytic subunit 0.95 8
Klebsiella michiganensis M5al 0.50 BWI76_RS04670 3-isopropylmalate dehydratase large subunit 0.43 BWI76_RS00960 acetolactate synthase 2 catalytic subunit 0.73 64
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_15 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.36 Pf1N1B4_2878 Acetolactate synthase large subunit (EC 2.2.1.6) 0.82 29
Acinetobacter radioresistens SK82 0.50 MPMX26_00345 3-isopropylmalate dehydratase large subunit 0.36 MPMX26_00472 Acetolactate synthase isozyme 3 large subunit 0.99 4
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_3948 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.36 PfGW456L13_1538 Acetolactate synthase large subunit (EC 2.2.1.6) 0.95 7
Pseudomonas putida KT2440 0.50 PP_1985 3-isopropylmalate dehydratase large subunit 0.37 PP_4680 acetohydroxybutanoate synthase / acetolactate synthase 0.92 2
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_20620 isopropylmalate isomerase 0.36 AO353_14495 acetolactate synthase 3 catalytic subunit 0.86 27
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS16515 isopropylmalate isomerase 0.36 HSERO_RS08650 acetolactate synthase 0.97 3
Shewanella amazonensis SB2B 0.50 Sama_0337 isopropylmalate isomerase large subunit (RefSeq) 0.39 Sama_3281 acetolactate synthase 2 catalytic subunit (RefSeq) low > 62
Pseudomonas sp. S08-1 0.50 OH686_04480 3-isopropylmalate dehydratase large subunit 0.37 OH686_08130 acetolactate synthase, large subunit, biosynthetic type 0.91 4
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_12605 3-isopropylmalate dehydratase large subunit 0.39 CSW01_12565 acetolactate synthase 3 large subunit low > 62
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.1049.1 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.39 Xcc-8004.1059.1 Acetolactate synthase large subunit (EC 2.2.1.6) 0.85 21
Dechlorosoma suillum PS 0.49 Dsui_3201 3-isopropylmalate dehydratase, large subunit 0.37 Dsui_1925 acetolactate synthase, large subunit, biosynthetic type
Dinoroseobacter shibae DFL-12 0.49 Dshi_0085 3-isopropylmalate dehydratase, large subunit (RefSeq) 0.37 Dshi_1779 acetolactate synthase, large subunit, biosynthetic type (RefSeq)
Rhodanobacter denitrificans MT42 0.49 LRK55_RS09975 3-isopropylmalate dehydratase large subunit 0.29 LRK55_RS09950 biosynthetic-type acetolactate synthase large subunit low > 63
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS10335 3-isopropylmalate dehydratase large subunit 0.29 LRK54_RS10310 biosynthetic-type acetolactate synthase large subunit 0.95 4
Variovorax sp. SCN45 0.49 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.38 GFF1597 Acetolactate synthase large subunit (EC 2.2.1.6) low > 127
Variovorax sp. OAS795 0.49 ABID97_RS08465 3-isopropylmalate dehydratase large subunit 0.37 ABID97_RS12545 biosynthetic-type acetolactate synthase large subunit
Synechococcus elongatus PCC 7942 0.48 Synpcc7942_1898 leuC isopropylmalate isomerase large subunit 0.40 Synpcc7942_0139 ilvB acetolactate synthase 3 catalytic subunit
Bifidobacterium breve UCC2003 0.48 BBR_RS19630 3-isopropylmalate dehydratase large subunit 0.35 BBR_RS12350 acetolactate synthase large subunit low > 34
Caulobacter crescentus NA1000 0.48 CCNA_00196 3-isopropylmalate dehydratase large subunit 0.38 CCNA_02185 acetolactate synthase large subunit 0.92 31
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_00196 3-isopropylmalate dehydratase large subunit 0.38 CCNA_02185 acetolactate synthase large subunit low > 67
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS15960 3-isopropylmalate dehydratase large subunit 0.31 ABZR86_RS15935 biosynthetic-type acetolactate synthase large subunit 0.97 10
Brevundimonas sp. GW460-12-10-14-LB2 0.47 A4249_RS10005 3-isopropylmalate dehydratase large subunit 0.39 A4249_RS10020 acetolactate synthase 2 catalytic subunit 0.99 17
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_13585 leuC 3-isopropylmalate dehydratase large subunit 0.28 OKGIIK_13610 ilvB biosynthetic-type acetolactate synthase large subunit 0.55 23
Methanococcus maripaludis JJ 0.22 MMJJ_RS08425 3-isopropylmalate dehydratase large subunit 0.39 MMJJ_RS01650 acetolactate synthase large subunit
Methanococcus maripaludis S2 0.22 MMP_RS05930 3-isopropylmalate dehydratase large subunit 0.39 MMP_RS03415 acetolactate synthase large subunit
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU2982 leuC 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) (from data) 0.43 DVU1376 ilvB-2 acetolactate synthase, large subunit, biosynthetic type (TIGR) 0.93 7
Desulfovibrio vulgaris Miyazaki F 0.20 DvMF_1792 3-isopropylmalate dehydratase large subunit (RefSeq) 0.43 DvMF_0153 acetolactate synthase, large subunit, biosynthetic type (RefSeq) 0.92 23

Not shown: 1 genomes with orthologs for BT1860 only; 0 genomes with orthologs for BT2077 only