Conservation of cofitness between b4005 and b0033 in Escherichia coli BW25113

103 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b4005 purD phosphoribosylamine--glycine ligase (NCBI) 1.0 b0033 carB carbamoyl-phosphate synthase large subunit (NCBI) 0.85 14
Escherichia coli ECOR27 0.99 NOLOHH_05460 purD Phosphoribosylamine--glycine ligase 1.00 NOLOHH_03270 carB carbamoyl-phosphate synthase large subunit low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04044 Phosphoribosylamine--glycine ligase 1.00 OHPLBJKB_03624 Carbamoyl-phosphate synthase large chain 0.64 4
Escherichia coli ECRC62 0.99 BNILDI_06060 purD Phosphoribosylamine--glycine ligase 1.00 BNILDI_08330 carB carbamoyl-phosphate synthase large subunit
Escherichia coli BL21 0.98 ECD_03882 phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase 1.00 ECD_00037 carbamoyl-phosphate synthase large subunit 0.82 5
Escherichia coli ECRC99 0.98 KEDOAH_14845 purD Phosphoribosylamine--glycine ligase 1.00 KEDOAH_17215 carB carbamoyl-phosphate synthase large subunit
Escherichia fergusonii Becca 0.98 EFB2_04605 Phosphoribosylamine--glycine ligase 1.00 EFB2_04012 Carbamoyl-phosphate synthase large chain low > 86
Escherichia coli ECRC101 0.98 MCAODC_03815 purD Phosphoribosylamine--glycine ligase 1.00 MCAODC_01455 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECRC98 0.98 JDDGAC_16940 purD Phosphoribosylamine--glycine ligase 1.00 JDDGAC_14535 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECRC101 0.98 OKFHMN_13315 purD Phosphoribosylamine--glycine ligase 1.00 OKFHMN_10940 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECOR38 0.98 HEPCGN_11955 purD Phosphoribosylamine--glycine ligase 1.00 HEPCGN_08925 carB carbamoyl-phosphate synthase large subunit low > 85
Escherichia coli ECRC102 0.98 NIAGMN_11065 purD Phosphoribosylamine--glycine ligase 1.00 NIAGMN_08790 carB carbamoyl-phosphate synthase large subunit
Escherichia coli Nissle 1917 0.98 ECOLIN_RS23095 phosphoribosylamine--glycine ligase 0.99 ECOLIN_RS00180 carbamoyl-phosphate synthase large subunit low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF4187 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.98 GFF213 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) low > 78
Klebsiella michiganensis M5al 0.92 BWI76_RS01610 phosphoribosylamine--glycine ligase 0.98 BWI76_RS04470 carbamoyl phosphate synthase large subunit 0.65 71
Enterobacter asburiae PDN3 0.92 EX28DRAFT_4544 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.98 EX28DRAFT_3638 carbamoyl-phosphate synthase, large subunit
Enterobacter sp. TBS_079 0.92 MPMX20_00225 Phosphoribosylamine--glycine ligase 0.98 MPMX20_00740 Carbamoyl-phosphate synthase large chain 0.90 8
Pantoea sp. MT58 0.84 IAI47_18045 phosphoribosylamine--glycine ligase 0.93 IAI47_16115 carbamoyl-phosphate synthase large subunit 0.87 14
Dickeya dadantii 3937 0.83 DDA3937_RS01215 phosphoribosylamine--glycine ligase 0.94 DDA3937_RS18305 carbamoyl-phosphate synthase large subunit 0.92 3
Dickeya dianthicola 67-19 0.83 HGI48_RS01210 phosphoribosylamine--glycine ligase 0.94 HGI48_RS18240 carbamoyl-phosphate synthase large subunit 0.81 9
Dickeya dianthicola ME23 0.83 DZA65_RS01255 phosphoribosylamine--glycine ligase 0.94 DZA65_RS19380 carbamoyl-phosphate synthase large subunit 0.87 7
Rahnella sp. WP5 0.82 EX31_RS16855 phosphoribosylamine--glycine ligase 0.94 EX31_RS03830 carbamoyl-phosphate synthase large subunit 0.93 37
Pectobacterium carotovorum WPP14 0.82 HER17_RS20340 phosphoribosylamine--glycine ligase 0.95 HER17_RS02900 carbamoyl-phosphate synthase large subunit 0.94 15
Erwinia tracheiphila SCR3 0.81 LU632_RS01015 purD phosphoribosylamine--glycine ligase 0.91 LU632_RS02750 carB carbamoyl-phosphate synthase large subunit 0.93 5
Serratia liquefaciens MT49 0.81 IAI46_01360 phosphoribosylamine--glycine ligase 0.94 IAI46_03195 carbamoyl-phosphate synthase large subunit 0.63 9
Vibrio cholerae E7946 ATCC 55056 0.79 CSW01_01415 phosphoribosylamine--glycine ligase 0.87 CSW01_12100 carbamoyl-phosphate synthase large chain 0.57 3
Marinobacter adhaerens HP15 0.75 HP15_3228 phosphoribosylamine-glycine ligase 0.74 HP15_3077 carbamoyl-phosphate synthase, large subunit
Pseudomonas putida KT2440 0.74 PP_4823 Phosphoribosylamine--glycine ligase 0.75 PP_4723 Carbamoyl-phosphate synthase large chain
Pseudomonas sp. RS175 0.73 PFR28_05213 Phosphoribosylamine--glycine ligase 0.76 PFR28_00077 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_3520 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.76 Pf6N2E2_3364 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_08230 phosphoribosylamine--glycine ligase 0.76 AO356_07480 carbamoyl phosphate synthase large subunit
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_13645 phosphoribosylamine--glycine ligase 0.75 AO353_05630 carbamoyl phosphate synthase large subunit
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_4407 phosphoribosylamine--glycine ligase 0.76 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens SBW25 0.73 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.75 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.75 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_4407 phosphoribosylamine--glycine ligase 0.76 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_1316 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.76 Pf1N1B4_1172 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas stutzeri RCH2 0.73 Psest_1013 phosphoribosylamine--glycine ligase 0.76 Psest_0968 carbamoyl-phosphate synthase, large subunit
Pseudomonas sp. S08-1 0.72 OH686_07625 Phosphoribosylamine--glycine ligase 0.75 OH686_17080 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_58 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.76 PfGW456L13_5099 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Alteromonas macleodii MIT1002 0.72 MIT1002_03961 Phosphoribosylamine--glycine ligase 0.80 MIT1002_01467 Carbamoyl-phosphate synthase large chain 0.96 36
Pseudomonas simiae WCS417 0.72 PS417_02935 phosphoribosylamine--glycine ligase 0.76 PS417_24040 carbamoyl phosphate synthase large subunit
Shewanella amazonensis SB2B 0.71 Sama_0394 phosphoribosylamine--glycine ligase (RefSeq) 0.85 Sama_2503 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.76 58
Kangiella aquimarina DSM 16071 0.71 B158DRAFT_0167 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.74 B158DRAFT_0616 carbamoyl-phosphate synthase, large subunit
Shewanella sp. ANA-3 0.70 Shewana3_0440 phosphoribosylamine--glycine ligase (RefSeq) 0.85 Shewana3_0968 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.93 7
Shewanella oneidensis MR-1 0.68 SO0441 purD phosphoribosylamine--glycine ligase (NCBI ptt file) 0.85 SO1142 carB carbamoyl-phosphate synthase, large subunit (NCBI ptt file) 0.93 8
Shewanella loihica PV-4 0.67 Shew_3413 phosphoribosylamine--glycine ligase (RefSeq) 0.84 Shew_2838 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.89 10
Xanthomonas campestris pv. campestris strain 8004 0.66 Xcc-8004.657.1 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.69 Xcc-8004.2912.1 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS13850 phosphoribosylamine--glycine ligase 0.70 ABZR86_RS05600 carbamoyl-phosphate synthase large subunit
Acinetobacter radioresistens SK82 0.64 MPMX26_01140 Phosphoribosylamine--glycine ligase 0.73 MPMX26_00766 Carbamoyl-phosphate synthase large chain low > 36
Rhodanobacter denitrificans FW104-10B01 0.63 LRK54_RS10165 phosphoribosylamine--glycine ligase 0.70 LRK54_RS18000 carbamoyl-phosphate synthase large subunit
Rhodanobacter denitrificans MT42 0.63 LRK55_RS09805 phosphoribosylamine--glycine ligase 0.70 LRK55_RS17855 carbamoyl-phosphate synthase large subunit
Lysobacter sp. OAE881 0.63 ABIE51_RS17770 phosphoribosylamine--glycine ligase 0.69 ABIE51_RS11615 carbamoyl-phosphate synthase large subunit low > 62
Rhodanobacter sp. FW510-T8 0.62 OKGIIK_13750 purD phosphoribosylamine--glycine ligase 0.70 OKGIIK_07295 carB carbamoyl-phosphate synthase large subunit 0.76 5
Dechlorosoma suillum PS 0.62 Dsui_1596 phosphoribosylamine--glycine ligase 0.69 Dsui_3064 carbamoyl-phosphate synthase, large subunit
Herbaspirillum seropedicae SmR1 0.60 HSERO_RS17755 phosphoribosylamine--glycine ligase 0.67 HSERO_RS06925 carbamoyl phosphate synthase large subunit
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_04521 phosphoribosylamine--glycine ligase 0.67 H281DRAFT_04403 carbamoyl-phosphate synthase large subunit
Paraburkholderia graminis OAS925 0.59 ABIE53_001545 phosphoribosylamine--glycine ligase 0.67 ABIE53_003004 carbamoyl-phosphate synthase large subunit
Burkholderia phytofirmans PsJN 0.59 BPHYT_RS06405 phosphoribosylamine--glycine ligase 0.67 BPHYT_RS14190 carbamoyl phosphate synthase large subunit 0.89 2
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS24400 phosphoribosylamine--glycine ligase 0.67 QEN71_RS04780 carbamoyl-phosphate synthase large subunit
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS15410 phosphoribosylamine--glycine ligase 0.67 ABZR87_RS14140 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum GMI1000 0.58 RS_RS10995 phosphoribosylamine--glycine ligase 0.67 RS_RS07630 carbamoyl-phosphate synthase large chain
Ralstonia solanacearum PSI07 0.58 RPSI07_RS13680 phosphoribosylamine--glycine ligase 0.67 RPSI07_RS15255 carbamoyl-phosphate synthase large subunit
Acidovorax sp. GW101-3H11 0.58 Ac3H11_2421 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.68 Ac3H11_436 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.57 GFF4524 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.66 GFF4898 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS03545 phosphoribosylamine--glycine ligase 0.67 RALBFv3_RS02190 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum UW163 0.57 UW163_RS10125 phosphoribosylamine--glycine ligase 0.67 UW163_RS15500 carbamoyl-phosphate synthase large subunit
Castellaniella sp019104865 MT123 0.57 ABCV34_RS02550 phosphoribosylamine--glycine ligase 0.67 ABCV34_RS15510 carbamoyl-phosphate synthase large subunit
Variovorax sp. SCN45 0.56 GFF302 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.67 GFF376 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Variovorax sp. OAS795 0.56 ABID97_RS16735 phosphoribosylamine--glycine ligase 0.67 ABID97_RS17080 carbamoyl-phosphate synthase large subunit
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS04730 phosphoribosylamine--glycine ligase 0.67 RR42_RS13510 carbamoyl phosphate synthase large subunit
Rhizobium sp. OAE497 0.54 ABIE40_RS05430 phosphoribosylamine--glycine ligase 0.59 ABIE40_RS12815 carbamoyl-phosphate synthase large subunit
Agrobacterium fabrum C58 0.54 Atu0647 phosphoribosylamine--glycine ligase 0.59 Atu2178 carbamoylphosphate synthase large subunit
Rhodopseudomonas palustris CGA009 0.53 TX73_005965 phosphoribosylamine--glycine ligase 0.60 TX73_021090 carbamoyl-phosphate synthase large subunit
Azospirillum brasilense Sp245 0.53 AZOBR_RS04470 phosphoribosylamine--glycine ligase 0.60 AZOBR_RS12895 carbamoyl phosphate synthase large subunit
Azospirillum sp. SherDot2 0.53 MPMX19_01630 Phosphoribosylamine--glycine ligase 0.59 MPMX19_02299 Carbamoyl-phosphate synthase large chain
Magnetospirillum magneticum AMB-1 0.53 AMB_RS01075 phosphoribosylamine--glycine ligase 0.61 AMB_RS03605 carbamoyl-phosphate synthase large subunit
Sinorhizobium meliloti 1021 0.52 SMc00993 phosphoribosylamine--glycine ligase 0.59 SMc01215 carbamoyl phosphate synthase large subunit 0.71 85
Desulfovibrio vulgaris Miyazaki F 0.49 DvMF_1722 phosphoribosylamine--glycine ligase (RefSeq) 0.58 DvMF_2306 carbamoyl-phosphate synthase, large subunit (RefSeq) 0.86 3
Bosea sp. OAE506 0.49 ABIE41_RS23160 phosphoribosylamine--glycine ligase 0.58 ABIE41_RS11910 carbamoyl-phosphate synthase large subunit
Desulfovibrio vulgaris Hildenborough JW710 0.48 DVU0488 purD phosphoribosylamine--glycine ligase (TIGR) 0.59 DVU0162 carB carbamoyl-phosphate synthase, large subunit (TIGR)
Rhodospirillum rubrum S1H 0.48 Rru_A0646 Phosphoribosylamine--glycine ligase (NCBI) 0.61 Rru_A2886 Carbamoyl-phosphate synthase, large subunit, glutamine-dependent (NCBI)
Phaeobacter inhibens DSM 17395 0.47 PGA1_c23610 phosphoribosylamine--glycine ligase PurD 0.57 PGA1_c24560 carbamoyl-phosphate synthase large chain 0.69 37
Dinoroseobacter shibae DFL-12 0.45 Dshi_2728 phosphoribosylamine--glycine ligase (RefSeq) 0.59 Dshi_2639 carbamoyl-phosphate synthase, large subunit (RefSeq) 0.78 19
Bacteroides stercoris CC31F 0.44 HMPREF1181_RS01580 phosphoribosylamine--glycine ligase 0.34 HMPREF1181_RS16075 carbamoyl-phosphate synthase large subunit low > 56
Parabacteroides merdae CL09T00C40 0.44 HMPREF1078_RS06805 phosphoribosylamine--glycine ligase 0.35 HMPREF1078_RS01300 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 61
Sphingomonas koreensis DSMZ 15582 0.44 Ga0059261_1441 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.61 Ga0059261_0007 carbamoyl-phosphate synthase, large subunit
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_0167 phosphoribosylamine--glycine ligase 0.43 Echvi_0768 carbamoyl-phosphate synthase, large subunit
Phocaeicola vulgatus CL09T03C04 0.43 HMPREF1058_RS10995 phosphoribosylamine--glycine ligase 0.35 HMPREF1058_RS06870 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 67
Fusobacterium nucleatum SB010 0.43 HUW76_05205 phosphoribosylamine--glycine ligase 0.47 HUW76_08750 carbamoyl-phosphate synthase large subunit 0.95 16
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS09255 phosphoribosylamine--glycine ligase 0.59 A4249_RS00725 carbamoyl-phosphate synthase large subunit
Bacteroides thetaiotaomicron VPI-5482 0.43 BT3253 phosphoribosylamine--glycine ligase (NCBI ptt file) 0.36 BT0557 carbamyl phosphate synthetase (NCBI ptt file) 0.44 64
Phocaeicola dorei CL03T12C01 0.43 ABI39_RS06055 phosphoribosylamine--glycine ligase 0.35 ABI39_RS20665 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 72
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS01620 phosphoribosylamine--glycine ligase 0.44 ABZR88_RS20475 carbamoyl-phosphate synthase large subunit
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_00299 phosphoribosylamine--glycine ligase 0.59 CCNA_02994 carbamoyl-phosphate synthase large chain low > 67
Caulobacter crescentus NA1000 0.43 CCNA_00299 phosphoribosylamine--glycine ligase 0.59 CCNA_02994 carbamoyl-phosphate synthase large chain
Synechococcus elongatus PCC 7942 0.42 Synpcc7942_0925 purD phosphoribosylamine--glycine ligase 0.58 Synpcc7942_0711 carB carbamoyl phosphate synthase large subunit
Bacteroides ovatus ATCC 8483 0.42 BACOVA_01348 phosphoribosylamine--glycine ligase 0.35 BACOVA_03752 carbamoyl-phosphate synthase, large subunit low > 94
Pontibacter actiniarum KMM 6156, DSM 19842 0.42 CA264_20115 phosphoribosylamine--glycine ligase 0.43 CA264_15430 carbamoyl phosphate synthase large subunit low > 74
Bifidobacterium breve UCC2003 0.42 BBR_RS13370 phosphoribosylamine--glycine ligase 0.50 BBR_RS13635 carbamoyl-phosphate synthase large subunit low > 34
Pedobacter sp. GW460-11-11-14-LB5 0.39 CA265_RS22605 phosphoribosylamine--glycine ligase 0.43 CA265_RS20080 carbamoyl phosphate synthase large subunit
Mycobacterium tuberculosis H37Rv 0.34 Rv0772 Probable phosphoribosylamine--glycine ligase PurD (GARS) (glycinamide ribonucleotide synthetase) (phosphoribosylglycinamide synthetase) (5'-phosphoribosylglycinamide synthetase) 0.50 Rv1384 Probable carbamoyl-phosphate synthase large chain CarB (carbamoyl-phosphate synthetase ammonia chain)
Methanococcus maripaludis JJ 0.23 MMJJ_RS03210 phosphoribosylamine--glycine ligase 0.49 MMJJ_RS09140 carbamoyl-phosphate synthase large subunit
Methanococcus maripaludis S2 0.23 MMP_RS02095 phosphoribosylamine--glycine ligase 0.49 MMP_RS05240 carbamoyl-phosphate synthase large subunit

Not shown: 0 genomes with orthologs for b4005 only; 0 genomes with orthologs for b0033 only