Conservation of cofitness between b4005 and b0032 in Escherichia coli BW25113

103 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b4005 purD phosphoribosylamine--glycine ligase (NCBI) 1.0 b0032 carA carbamoyl-phosphate synthase small subunit (NCBI) 0.85 15
Escherichia coli ECOR27 0.99 NOLOHH_05460 purD Phosphoribosylamine--glycine ligase 1.00 NOLOHH_03275 carA carbamoyl phosphate synthase small subunit low > 57
Escherichia coli ECRC62 0.99 BNILDI_06060 purD Phosphoribosylamine--glycine ligase 1.00 BNILDI_08325 carA carbamoyl phosphate synthase small subunit
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04044 Phosphoribosylamine--glycine ligase 1.00 OHPLBJKB_03625 Carbamoyl-phosphate synthase small chain 0.64 6
Escherichia coli BL21 0.98 ECD_03882 phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase 1.00 ECD_00036 carbamoyl phosphate synthetase small subunit, glutamine amidotransferase 0.73 10
Escherichia coli ECOR38 0.98 HEPCGN_11955 purD Phosphoribosylamine--glycine ligase 0.99 HEPCGN_08930 carA carbamoyl phosphate synthase small subunit low > 85
Escherichia coli Nissle 1917 0.98 ECOLIN_RS23095 phosphoribosylamine--glycine ligase 0.99 ECOLIN_RS00175 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 52
Escherichia coli ECRC101 0.98 OKFHMN_13315 purD Phosphoribosylamine--glycine ligase 1.00 OKFHMN_10945 carA carbamoyl phosphate synthase small subunit
Escherichia coli ECRC99 0.98 KEDOAH_14845 purD Phosphoribosylamine--glycine ligase 1.00 KEDOAH_17210 carA carbamoyl phosphate synthase small subunit
Escherichia fergusonii Becca 0.98 EFB2_04605 Phosphoribosylamine--glycine ligase 0.99 EFB2_04013 Carbamoyl-phosphate synthase small chain low > 86
Escherichia coli ECRC101 0.98 MCAODC_03815 purD Phosphoribosylamine--glycine ligase 1.00 MCAODC_01460 carA carbamoyl phosphate synthase small subunit
Escherichia coli ECRC102 0.98 NIAGMN_11065 purD Phosphoribosylamine--glycine ligase 1.00 NIAGMN_08795 carA carbamoyl phosphate synthase small subunit
Escherichia coli ECRC98 0.98 JDDGAC_16940 purD Phosphoribosylamine--glycine ligase 1.00 JDDGAC_14540 carA carbamoyl phosphate synthase small subunit
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF4187 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.96 GFF214 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) low > 78
Klebsiella michiganensis M5al 0.92 BWI76_RS01610 phosphoribosylamine--glycine ligase 0.96 BWI76_RS04465 carbamoyl-phosphate synthase small subunit 0.58 76
Enterobacter asburiae PDN3 0.92 EX28DRAFT_4544 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.96 EX28DRAFT_3637 carbamoyl-phosphate synthase, small subunit
Enterobacter sp. TBS_079 0.92 MPMX20_00225 Phosphoribosylamine--glycine ligase 0.92 MPMX20_00739 Carbamoyl-phosphate synthase small chain 0.88 15
Pantoea sp. MT58 0.84 IAI47_18045 phosphoribosylamine--glycine ligase 0.86 IAI47_16120 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.86 15
Dickeya dadantii 3937 0.83 DDA3937_RS01215 phosphoribosylamine--glycine ligase 0.86 DDA3937_RS18310 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.92 4
Dickeya dianthicola 67-19 0.83 HGI48_RS01210 phosphoribosylamine--glycine ligase 0.85 HGI48_RS18245 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.85 6
Dickeya dianthicola ME23 0.83 DZA65_RS01255 phosphoribosylamine--glycine ligase 0.85 DZA65_RS19385 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.84 8
Rahnella sp. WP5 0.82 EX31_RS16855 phosphoribosylamine--glycine ligase 0.89 EX31_RS03835 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.92 42
Pectobacterium carotovorum WPP14 0.82 HER17_RS20340 phosphoribosylamine--glycine ligase 0.88 HER17_RS02895 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.92 31
Erwinia tracheiphila SCR3 0.81 LU632_RS01015 purD phosphoribosylamine--glycine ligase 0.84 LU632_RS02755 carA glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.92 7
Serratia liquefaciens MT49 0.81 IAI46_01360 phosphoribosylamine--glycine ligase 0.86 IAI46_03190 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.63 8
Vibrio cholerae E7946 ATCC 55056 0.79 CSW01_01415 phosphoribosylamine--glycine ligase 0.84 CSW01_12105 carbamoyl-phosphate synthase small subunit low > 62
Marinobacter adhaerens HP15 0.75 HP15_3228 phosphoribosylamine-glycine ligase 0.70 HP15_3078 carbamoyl-phosphate synthase small chain
Pseudomonas putida KT2440 0.74 PP_4823 Phosphoribosylamine--glycine ligase 0.69 PP_4724 Carbamoyl-phosphate synthase small chain
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_08230 phosphoribosylamine--glycine ligase 0.69 AO356_07485 carbamoyl phosphate synthase small subunit
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_3520 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.69 Pf6N2E2_3365 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Pseudomonas sp. RS175 0.73 PFR28_05213 Phosphoribosylamine--glycine ligase 0.69 PFR28_00076 Carbamoyl-phosphate synthase small chain
Pseudomonas fluorescens SBW25 0.73 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.68 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_13645 phosphoribosylamine--glycine ligase 0.70 AO353_05635 carbamoyl phosphate synthase small subunit
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.68 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_4407 phosphoribosylamine--glycine ligase 0.69 Psyr_4192 carbamoyl-phosphate synthase small subunit
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_4407 phosphoribosylamine--glycine ligase 0.69 Psyr_4192 carbamoyl-phosphate synthase small subunit
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_1316 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.69 Pf1N1B4_1173 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Pseudomonas stutzeri RCH2 0.73 Psest_1013 phosphoribosylamine--glycine ligase 0.69 Psest_0967 carbamoyl-phosphate synthase, small subunit
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_58 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.70 PfGW456L13_5100 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Pseudomonas sp. S08-1 0.72 OH686_07625 Phosphoribosylamine--glycine ligase 0.70 OH686_17075 Carbamoyl-phosphate synthase small chain
Alteromonas macleodii MIT1002 0.72 MIT1002_03961 Phosphoribosylamine--glycine ligase 0.74 MIT1002_01466 Carbamoyl-phosphate synthase small chain 0.96 35
Pseudomonas simiae WCS417 0.72 PS417_02935 phosphoribosylamine--glycine ligase 0.69 PS417_24045 carbamoyl phosphate synthase small subunit
Kangiella aquimarina DSM 16071 0.71 B158DRAFT_0167 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.73 B158DRAFT_0615 carbamoyl-phosphate synthase, small subunit
Shewanella amazonensis SB2B 0.71 Sama_0394 phosphoribosylamine--glycine ligase (RefSeq) 0.80 Sama_2504 carbamoyl phosphate synthase small subunit (RefSeq) 0.78 38
Shewanella sp. ANA-3 0.70 Shewana3_0440 phosphoribosylamine--glycine ligase (RefSeq) 0.77 Shewana3_0967 carbamoyl phosphate synthase small subunit (RefSeq) 0.92 10
Shewanella oneidensis MR-1 0.68 SO0441 purD phosphoribosylamine--glycine ligase (NCBI ptt file) 0.78 SO1141 carA carbamoyl-phosphate synthase, small subunit (NCBI ptt file) 0.92 9
Shewanella loihica PV-4 0.67 Shew_3413 phosphoribosylamine--glycine ligase (RefSeq) 0.77 Shew_2839 carbamoyl phosphate synthase small subunit (RefSeq) 0.90 9
Xanthomonas campestris pv. campestris strain 8004 0.66 Xcc-8004.657.1 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.64 Xcc-8004.2914.1 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS13850 phosphoribosylamine--glycine ligase 0.64 ABZR86_RS05605 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Acinetobacter radioresistens SK82 0.64 MPMX26_01140 Phosphoribosylamine--glycine ligase 0.69 MPMX26_00767 Carbamoyl-phosphate synthase small chain low > 36
Rhodanobacter denitrificans FW104-10B01 0.63 LRK54_RS10165 phosphoribosylamine--glycine ligase 0.65 LRK54_RS17995 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Rhodanobacter denitrificans MT42 0.63 LRK55_RS09805 phosphoribosylamine--glycine ligase 0.65 LRK55_RS17850 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Lysobacter sp. OAE881 0.63 ABIE51_RS17770 phosphoribosylamine--glycine ligase 0.65 ABIE51_RS11625 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 62
Rhodanobacter sp. FW510-T8 0.62 OKGIIK_13750 purD phosphoribosylamine--glycine ligase 0.64 OKGIIK_07300 carbamoyl phosphate synthase small subunit 0.66 41
Dechlorosoma suillum PS 0.62 Dsui_1596 phosphoribosylamine--glycine ligase 0.66 Dsui_3065 carbamoyl-phosphate synthase, small subunit
Herbaspirillum seropedicae SmR1 0.60 HSERO_RS17755 phosphoribosylamine--glycine ligase 0.65 HSERO_RS06920 carbamoyl phosphate synthase small subunit
Paraburkholderia graminis OAS925 0.59 ABIE53_001545 phosphoribosylamine--glycine ligase 0.63 ABIE53_003005 carbamoyl-phosphate synthase small subunit
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_04521 phosphoribosylamine--glycine ligase 0.62 H281DRAFT_04402 carbamoyl-phosphate synthase small subunit
Burkholderia phytofirmans PsJN 0.59 BPHYT_RS06405 phosphoribosylamine--glycine ligase 0.62 BPHYT_RS14195 carbamoyl phosphate synthase small subunit 0.74 35
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS24400 phosphoribosylamine--glycine ligase 0.64 QEN71_RS04775 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS15410 phosphoribosylamine--glycine ligase 0.66 ABZR87_RS14150 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Ralstonia solanacearum GMI1000 0.58 RS_RS10995 phosphoribosylamine--glycine ligase 0.65 RS_RS07620 carbamoyl-phosphate synthase small subunit
Ralstonia solanacearum PSI07 0.58 RPSI07_RS13680 phosphoribosylamine--glycine ligase 0.66 RPSI07_RS15245 carbamoyl-phosphate synthase small subunit
Acidovorax sp. GW101-3H11 0.58 Ac3H11_2421 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.64 Ac3H11_435 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.57 GFF4524 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.63 GFF4899 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Castellaniella sp019104865 MT123 0.57 ABCV34_RS02550 phosphoribosylamine--glycine ligase 0.60 ABCV34_RS15505 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Ralstonia solanacearum UW163 0.57 UW163_RS10125 phosphoribosylamine--glycine ligase 0.66 UW163_RS15510 carbamoyl-phosphate synthase small subunit
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS03545 phosphoribosylamine--glycine ligase 0.66 RALBFv3_RS02200 carbamoyl-phosphate synthase small subunit
Variovorax sp. SCN45 0.56 GFF302 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.63 GFF377 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Variovorax sp. OAS795 0.56 ABID97_RS16735 phosphoribosylamine--glycine ligase 0.63 ABID97_RS17090 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS04730 phosphoribosylamine--glycine ligase 0.66 RR42_RS13520 carbamoyl phosphate synthase small subunit
Rhizobium sp. OAE497 0.54 ABIE40_RS05430 phosphoribosylamine--glycine ligase 0.47 ABIE40_RS12765 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Agrobacterium fabrum C58 0.54 Atu0647 phosphoribosylamine--glycine ligase 0.47 Atu2170 carbamoylphosphate synthase small chain
Rhodopseudomonas palustris CGA009 0.53 TX73_005965 phosphoribosylamine--glycine ligase 0.51 TX73_006555 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Azospirillum brasilense Sp245 0.53 AZOBR_RS04470 phosphoribosylamine--glycine ligase 0.52 AZOBR_RS10920 carbamoyl phosphate synthase small subunit
Azospirillum sp. SherDot2 0.53 MPMX19_01630 Phosphoribosylamine--glycine ligase 0.52 MPMX19_00757 Carbamoyl-phosphate synthase small chain
Magnetospirillum magneticum AMB-1 0.53 AMB_RS01075 phosphoribosylamine--glycine ligase 0.53 AMB_RS03600 carbamoyl-phosphate synthase small subunit
Sinorhizobium meliloti 1021 0.52 SMc00993 phosphoribosylamine--glycine ligase 0.48 SMc01569 carbamoyl phosphate synthase small subunit 0.65 96
Desulfovibrio vulgaris Miyazaki F 0.49 DvMF_1722 phosphoribosylamine--glycine ligase (RefSeq) 0.38 DvMF_2370 carbamoyl phosphate synthase small subunit (RefSeq) 0.79 14
Bosea sp. OAE506 0.49 ABIE41_RS23160 phosphoribosylamine--glycine ligase 0.48 ABIE41_RS11975 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Desulfovibrio vulgaris Hildenborough JW710 0.48 DVU0488 purD phosphoribosylamine--glycine ligase (TIGR) 0.40 DVU3113 carA carbamoyl-phosphate synthase, small subunit (TIGR)
Rhodospirillum rubrum S1H 0.48 Rru_A0646 Phosphoribosylamine--glycine ligase (NCBI) 0.49 Rru_A2885 Carbamoyl-phosphate synthase, small subunit (NCBI)
Phaeobacter inhibens DSM 17395 0.47 PGA1_c23610 phosphoribosylamine--glycine ligase PurD 0.49 PGA1_c06670 carbamoyl-phosphate synthase small chain 0.62 52
Dinoroseobacter shibae DFL-12 0.45 Dshi_2728 phosphoribosylamine--glycine ligase (RefSeq) 0.49 Dshi_2387 carbamoyl-phosphate synthase, small subunit (RefSeq)
Parabacteroides merdae CL09T00C40 0.44 HMPREF1078_RS06805 phosphoribosylamine--glycine ligase 0.33 HMPREF1078_RS01295 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 61
Bacteroides stercoris CC31F 0.44 HMPREF1181_RS01580 phosphoribosylamine--glycine ligase 0.33 HMPREF1181_RS16070 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 56
Sphingomonas koreensis DSMZ 15582 0.44 Ga0059261_1441 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.49 Ga0059261_4243 carbamoyl-phosphate synthase, small subunit
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_0167 phosphoribosylamine--glycine ligase 0.38 Echvi_0226 carbamoyl-phosphate synthase, small subunit
Phocaeicola vulgatus CL09T03C04 0.43 HMPREF1058_RS10995 phosphoribosylamine--glycine ligase 0.33 HMPREF1058_RS06875 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 67
Fusobacterium nucleatum SB010 0.43 HUW76_05205 phosphoribosylamine--glycine ligase 0.39 HUW76_08755 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 35
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS09255 phosphoribosylamine--glycine ligase 0.48 A4249_RS16140 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Bacteroides thetaiotaomicron VPI-5482 0.43 BT3253 phosphoribosylamine--glycine ligase (NCBI ptt file) 0.32 BT0556 carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) 0.44 68
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS01620 phosphoribosylamine--glycine ligase 0.39 ABZR88_RS17830 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Phocaeicola dorei CL03T12C01 0.43 ABI39_RS06055 phosphoribosylamine--glycine ligase 0.34 ABI39_RS20670 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 72
Caulobacter crescentus NA1000 0.43 CCNA_00299 phosphoribosylamine--glycine ligase 0.47 CCNA_02925 carbamoyl-phosphate synthase small chain
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_00299 phosphoribosylamine--glycine ligase 0.47 CCNA_02925 carbamoyl-phosphate synthase small chain low > 67
Synechococcus elongatus PCC 7942 0.42 Synpcc7942_0925 purD phosphoribosylamine--glycine ligase 0.45 Synpcc7942_2122 carA carbamoyl phosphate synthase small subunit
Bacteroides ovatus ATCC 8483 0.42 BACOVA_01348 phosphoribosylamine--glycine ligase 0.33 BACOVA_03753 carbamoyl-phosphate synthase, small subunit low > 94
Pontibacter actiniarum KMM 6156, DSM 19842 0.42 CA264_20115 phosphoribosylamine--glycine ligase 0.39 CA264_19490 carbamoyl phosphate synthase small subunit low > 74
Bifidobacterium breve UCC2003 0.42 BBR_RS13370 phosphoribosylamine--glycine ligase 0.37 BBR_RS13630 carbamoyl-phosphate synthase small subunit low > 34
Pedobacter sp. GW460-11-11-14-LB5 0.39 CA265_RS22605 phosphoribosylamine--glycine ligase 0.40 CA265_RS15240 carbamoyl phosphate synthase small subunit
Mycobacterium tuberculosis H37Rv 0.34 Rv0772 Probable phosphoribosylamine--glycine ligase PurD (GARS) (glycinamide ribonucleotide synthetase) (phosphoribosylglycinamide synthetase) (5'-phosphoribosylglycinamide synthetase) 0.37 Rv1383 Probable carbamoyl-phosphate synthase small chain CarA (carbamoyl-phosphate synthetase glutamine chain)
Methanococcus maripaludis S2 0.23 MMP_RS02095 phosphoribosylamine--glycine ligase 0.37 MMP_RS08170 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Methanococcus maripaludis JJ 0.23 MMJJ_RS03210 phosphoribosylamine--glycine ligase 0.37 MMJJ_RS06195 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit

Not shown: 0 genomes with orthologs for b4005 only; 0 genomes with orthologs for b0032 only