Homologs of Psyr_4761 from Pseudomonas syringae pv. syringae B728a

DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase
SEED: Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
KEGG: formamidopyrimidine-DNA glycosylase

150 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas syringae pv. syringae B728a Psyr_4761 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase insig. 100 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4761 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase insig. 100 100
o Pseudomonas sp. RS175 PFR28_04272 Formamidopyrimidine-DNA glycosylase insig. 90 100
o Pseudomonas sp. DMC3 GFF239 Formamidopyrimidine-DNA glycosylase insig. 91 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2309 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 91 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_979 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 91 100
o Pseudomonas protegens RBAN4 FABNJH_29590 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 90 100
o Pseudomonas fluorescens FW300-N2E3 AO353_08320 5-hydroxymethyluracil DNA glycosylase insig. 90 100
o Pseudomonas sp. SVBP6 COO64_RS12835 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 89 100
o Pseudomonas sp. BP01 JOY50_RS20760 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 91 100
o Pseudomonas putida KT2440 PP_5125 Formamidopyrimidine-DNA glycosylase insig. 91 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4569 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 90 100
o Pseudomonas fluorescens FW300-N2C3 AO356_13270 5-hydroxymethyluracil DNA glycosylase insig. 90 100
o Pseudomonas simiae WCS417 PS417_26870 5-hydroxymethyluracil DNA glycosylase insig. 89 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05511 Formamidopyrimidine-DNA glycosylase cofit 89 100
o Pseudomonas orientalis W4I3 QF045_RS01270 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 88 100
o Pseudomonas fluorescens SBW25 PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 88 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 88 100
o Pseudomonas aeruginosa PA14 IKLFDK_23650 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 83 100
o Pseudomonas aeruginosa PUPa3 NPBIFN_00368 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 83 100
o Pseudomonas segetis P6 ACVTMO_RS22040 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 83 100
o Pseudomonas aeruginosa MRSN321 PFGADD_00364 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 83 100
o Pseudomonas sp. S08-1 OH686_14125 DNA-formamidopyrimidine glycosylase cofit 86 100
o Pseudomonas stutzeri RCH2 Psest_0239 formamidopyrimidine-DNA glycosylase (fpg) insig. 79 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13335 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 64 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS03605 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 63 100
o Rhodanobacter sp. FW510-T8 OKGIIK_13060 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 63 100
o Rhodanobacter denitrificans MT42 LRK55_RS10505 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 62 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10815 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 62 100
o Alteromonas macleodii MIT1002 MIT1002_00057 Formamidopyrimidine-DNA glycosylase insig. 57 100
o Lysobacter sp. OAE881 ABIE51_RS00335 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 59 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5281.1 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 58 100
o Pantoea sp. MT58 IAI47_00635 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 56 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS00625 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 56 100
o Shewanella amazonensis SB2B Sama_0117 formamidopyrimidine-DNA glycosylase (RefSeq) sig. 57 100
o Escherichia coli BL21 ECD_03492 formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase insig. 56 100
o Escherichia coli ECRC62 BNILDI_04000 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 56 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00067 Formamidopyrimidine-DNA glycosylase cofit 56 100
o Escherichia coli Nissle 1917 ECOLIN_RS20715 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 56 100
o Escherichia coli BW25113 b3635 mutM formamidopyrimidine-DNA glycosylase (NCBI) insig. 56 100
o Escherichia fergusonii Becca EFB2_00178 Formamidopyrimidine-DNA glycosylase insig. 56 100
o Escherichia coli ECRC100 OKFHMN_15635 Formamidopyrimidine-DNA glycosylase cofit 56 100
o Escherichia coli ECRC101 MCAODC_06145 Formamidopyrimidine-DNA glycosylase insig. 56 100
o Escherichia coli ECRC102 NIAGMN_13395 Formamidopyrimidine-DNA glycosylase insig. 56 100
o Escherichia coli ECRC98 JDDGAC_19260 Formamidopyrimidine-DNA glycosylase insig. 56 100
o Escherichia coli ECRC99 KEDOAH_12515 Formamidopyrimidine-DNA glycosylase no data 56 100
o Serratia liquefaciens MT49 IAI46_24810 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 56 100
o Escherichia coli ECOR27 NOLOHH_07515 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 56 100
o Erwinia tracheiphila SCR3 LU632_RS21975 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 54 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_01175 formamidopyrimidine-DNA glycosylase insig. 54 100
o Escherichia coli ECOR38 HEPCGN_14460 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 56 100
o Shewanella loihica PV-4 Shew_3690 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 57 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF374 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 55 100
o Klebsiella pneumoniae MKP103 KDGMDA_08015 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 54 100
o Shewanella oneidensis MR-1 SO4726 mutM formamidopyrimidine-DNA glycosylase (NCBI ptt file) insig. 57 100
o Klebsiella pneumoniae MRSN742743 GJGHJB_00138 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 54 100
o Klebsiella michiganensis M5al BWI76_RS27330 DNA-formamidopyrimidine glycosylase insig. 54 100
o Rahnella sp. WP5 EX31_RS14455 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 54 100
o Enterobacter sp. TBS_079 MPMX20_00100 Formamidopyrimidine-DNA glycosylase insig. 54 100
o Marinobacter adhaerens HP15 HP15_3493 formamidopyrimidine-DNA glycosylase insig. 56 91
o Erwinia amylovora T8 OLJFJH_05810 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 54 100
o Dickeya dianthicola 67-19 HGI48_RS00715 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 54 100
o Dickeya dianthicola ME23 DZA65_RS00770 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase sig. 54 100
o Pectobacterium carotovorum WPP14 HER17_RS20815 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 54 100
o Dickeya dadantii 3937 DDA3937_RS20500 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 54 100
o Enterobacter asburiae PDN3 EX28DRAFT_3885 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) insig. 54 100
o Shewanella sp. ANA-3 Shewana3_4084 formamidopyrimidine-DNA glycosylase (RefSeq) cofit 56 100
o Herbaspirillum seropedicae SmR1 HSERO_RS19545 formamidopyrimidine-DNA glycosylase insig. 51 100
o Acinetobacter radioresistens SK82 MPMX26_02486 Formamidopyrimidine-DNA glycosylase insig. 51 100
o Cupriavidus basilensis FW507-4G11 RR42_RS02040 formamidopyrimidine-DNA glycosylase insig. 49 100
o Kangiella aquimarina DSM 16071 B158DRAFT_0778 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) cofit 50 100
o Methylophilus sp. DMC18 GFF1917 Formamidopyrimidine-DNA glycosylase cofit 50 100
o Paraburkholderia graminis OAS925 ABIE53_000711 formamidopyrimidine-DNA glycosylase insig. 51 100
o Ralstonia solanacearum PSI07 RPSI07_RS22175 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 49 100
o Ralstonia solanacearum GMI1000 RS_RS01975 formamidopyrimidine-DNA glycosylase insig. 50 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS11125 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 50 100
o Ralstonia solanacearum UW163 UW163_RS02455 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 50 100
o Acinetobacter baumannii LAC-4 RR41_RS03325 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 51 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01934 DNA-(apurinic or apyrimidinic site) lyase insig. 51 100
o Burkholderia phytofirmans PsJN BPHYT_RS02870 formamidopyrimidine-DNA glycosylase insig. 50 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS01720 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 50 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS07015 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase cofit 48 100
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_07805 Formamidopyrimidine-DNA glycosylase cofit 53 78
o Castellaniella sp019104865 MT123 ABCV34_RS09265 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 47 100
o Dechlorosoma suillum PS Dsui_1031 formamidopyrimidine-DNA glycosylase Fpg insig. 46 100
o Variovorax sp. SCN45 GFF2353 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 48 100
o Phaeobacter inhibens DSM 17395 PGA1_c36490 formamidopyrimidine-DNA glycosylase MutM insig. 43 100
o Dinoroseobacter shibae DFL-12 Dshi_3369 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 44 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14505 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 45 100
o Variovorax sp. OAS795 ABID97_RS23725 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 49 100
o Azospirillum brasilense Sp245 AZOBR_RS01270 5-hydroxymethyluracil DNA glycosylase insig. 43 100
o Rhodospirillum rubrum S1H Rru_A3799 DNA-formamidopyrimidine glycosylase (NCBI) insig. 44 100
o Rhodopseudomonas palustris CGA009 TX73_000435 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 40 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF825 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 42 100
o Caulobacter crescentus NA1000 CCNA_03822 formamidopyrimidine-DNA glycosylase insig. 42 100
o Caulobacter crescentus NA1000 Δfur CCNA_03822 formamidopyrimidine-DNA glycosylase cofit 42 100
o Sphingobium sp. HT1-2 GFF386 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) cofit 44 100
o Magnetospirillum magneticum AMB-1 AMB_RS03255 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 43 100
o Xanthobacter sp. DMC5 GFF2040 Formamidopyrimidine-DNA glycosylase insig. 40 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3586 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) insig. 43 100
o Azospirillum sp. SherDot2 MPMX19_02764 Formamidopyrimidine-DNA glycosylase insig. 41 100
o Agrobacterium fabrum C58 Atu0321 formamidopyrimidine-DNA glycosylase insig. 40 100
o Rhizobium sp. OAE497 ABIE40_RS01590 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 39 100
o Sinorhizobium meliloti 1021 SMc01154 formamidopyrimidine-DNA glycosylase insig. 39 100
o Bosea sp. OAE506 ABIE41_RS04205 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 38 100
  Variovorax sp. SCN45 GFF7985 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) no data 61 53
o Synechococcus elongatus PCC 7942 Synpcc7942_1323 fpg DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase insig. 36 100
o Synechocystis sp000284455 PCC 6803 SGL_RS11245 DNA-formamidopyrimidine glycosylase insig. 36 100
o Mycobacterium tuberculosis H37Rv Rv2924c Probable formamidopyrimidine-DNA glycosylase Fpg (FAPY-DNA glycosylase) insig. 35 100
  Desulfovibrio vulgaris Hildenborough JW710 DVU3256 mutM formamidopyrimidine-DNA glycosylase (TIGR) insig. 36 75
  Acidovorax sp. GW101-3H11 Ac3H11_3456 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 42 56
  Desulfovibrio vulgaris Miyazaki F DvMF_2449 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 35 74
  Mycobacterium tuberculosis H37Rv Rv3297 Probable endonuclease VIII Nei insig. 28 100
  Klebsiella pneumoniae MRSN742743 GJGHJB_03520 nei endonuclease VIII insig. 25 100
  Mycobacterium tuberculosis H37Rv Rv2464c Possible DNA glycosylase insig. 29 54
  Klebsiella pneumoniae MKP103 KDGMDA_16700 endonuclease VIII insig. 25 100
  Alteromonas macleodii MIT1002 MIT1002_02957 DNA glycosylase/AP lyase Nei insig. 24 100
  Escherichia fergusonii Becca EFB2_03389 Endonuclease 8 insig. 26 100
  Escherichia coli Nissle 1917 ECOLIN_RS03820 endonuclease VIII no data 26 100
  Mycobacterium tuberculosis H37Rv Rv0944 Possible formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase) insig. 32 52
  Escherichia coli BW25113 b0714 nei endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase (NCBI) insig. 26 100
  Escherichia coli BL21 ECD_00674 endonuclease VIII and 5-formyluracil/5-hydroxymethyluracil DNA glycosylase insig. 26 100
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03003 Endonuclease 8 insig. 26 100
  Pantoea sp. MT58 IAI47_13775 endonuclease VIII insig. 26 100
  Rahnella sp. WP5 EX31_RS23405 endonuclease VIII insig. 27 100
  Klebsiella michiganensis M5al BWI76_RS08380 endonuclease VIII insig. 27 100
  Erwinia amylovora T8 OLJFJH_16985 endonuclease VIII insig. 25 100
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS13885 nei endonuclease VIII insig. 25 100
  Pectobacterium carotovorum WPP14 HER17_RS14965 endonuclease VIII insig. 26 100
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4632 Endonuclease VIII insig. 24 100
  Escherichia coli ECOR38 HEPCGN_01220 nei endonuclease VIII insig. 25 100
  Escherichia coli ECRC100 OKFHMN_06990 nei endonuclease VIII insig. 24 100
  Escherichia coli ECRC102 NIAGMN_05045 nei endonuclease VIII cofit 24 100
  Escherichia coli ECRC99 KEDOAH_20975 nei endonuclease VIII no data 24 100
  Escherichia coli ECOR27 NOLOHH_23375 nei endonuclease VIII insig. 25 100
  Escherichia coli ECRC62 BNILDI_21370 nei endonuclease VIII insig. 25 100
  Escherichia coli ECRC98 JDDGAC_10645 nei endonuclease VIII insig. 24 100
  Serratia liquefaciens MT49 IAI46_06245 endonuclease VIII insig. 28 84
  Enterobacter sp. TBS_079 MPMX20_01348 Endonuclease 8 insig. 24 100
  Enterobacter asburiae PDN3 EX28DRAFT_2273 Formamidopyrimidine-DNA glycosylase insig. 23 100
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_07800 hypothetical protein no data 59 17
  Dickeya dadantii 3937 DDA3937_RS06430 endonuclease VIII insig. 23 100
  Marinobacter adhaerens HP15 HP15_4107 endonuclease 8 cofit 28 53
  Bacteroides thetaiotaomicron VPI-5482 BT2359 formamidopyrimidine-DNA glycosylase (NCBI ptt file) insig. 25 100
  Pseudomonas sp. S08-1 OH686_17610 Endonuclease insig. 25 84
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11980 formamidopyrimidine-DNA glycosylase insig. 25 79
  Bacteroides thetaiotaomicron VPI-5482 BT4488 formamidopyrimidine-DNA glycosylase (NCBI ptt file) sig. 23 100
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07525 DNA-formamidopyrimidine glycosylase family protein insig. 33 45
  Desulfovibrio vulgaris Hildenborough JW710 DVU3256 mutM formamidopyrimidine-DNA glycosylase (TIGR) insig. 40 27
  Desulfovibrio vulgaris Miyazaki F DvMF_2449 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 40 23