Homologs of PP_5313 from Pseudomonas putida KT2440

DNA-binding protein HU-alpha
KEGG: DNA-binding protein HU-alpha

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_5313 DNA-binding protein HU-alpha strong 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS29695 HU family DNA-binding protein no data 84 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29695 HU family DNA-binding protein no data 84 91
o Pseudomonas simiae WCS417 PS417_28005 integration host factor no data 84 91
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2051 DNA-binding protein HU-alpha no data 84 90
o Pseudomonas fluorescens FW300-N2C3 AO356_10970 integration host factor no data 83 90
o Pseudomonas fluorescens GW456-L13 PfGW456L13_769 DNA-binding protein HU-alpha insig. 83 90
o Pseudomonas fluorescens FW300-N2E3 AO353_09825 integration host factor no data 83 90
o Pseudomonas sp. RS175 PFR28_04473 DNA-binding protein HU-beta sig. 83 90
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4059 DNA-binding protein HU-alpha insig. 83 90
o Pseudomonas sp. S08-1 OH686_13485 DNA-binding protein HU no data 82 90
o Pseudomonas syringae pv. syringae B728a Psyr_5027 bacterial nucleoid protein HU alpha subunit no data 82 90
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_5027 bacterial nucleoid protein HU alpha subunit insig. 82 90
o Pseudomonas stutzeri RCH2 Psest_3833 Bacterial nucleoid DNA-binding protein no data 79 90
o Marinobacter adhaerens HP15 HP15_3504 histone-like bacterial DNA-binding protein insig. 56 89
  Pseudomonas sp. S08-1 OH686_03630 DNA-binding protein HU-beta no data 53 90
  Marinobacter adhaerens HP15 HP15_2182 histone-like bacterial DNA-binding protein no data 55 89
  Dickeya dianthicola 67-19 HGI48_RS01200 DNA-binding protein HU-alpha no data 56 89
  Dickeya dianthicola ME23 DZA65_RS01245 DNA-binding protein HU-alpha no data 56 89
  Vibrio cholerae E7946 ATCC 55056 CSW01_01405 DNA-binding protein HU-alpha cofit 54 89
  Lysobacter sp. OAE881 ABIE51_RS14140 HU family DNA-binding protein no data 52 90
  Pseudomonas stutzeri RCH2 Psest_2284 Bacterial nucleoid DNA-binding protein no data 52 90
  Acinetobacter radioresistens SK82 MPMX26_01331 DNA-binding protein HU-beta no data 56 89
  Dickeya dadantii 3937 DDA3937_RS01205 DNA-binding protein HU-alpha no data 55 89
  Shewanella loihica PV-4 Shew_2505 histone family protein DNA-binding protein (RefSeq) no data 51 90
  Lysobacter sp. OAE881 ABIE51_RS05120 HU family DNA-binding protein no data 51 89
  Erwinia tracheiphila SCR3 LU632_RS01000 hupA DNA-binding protein HU-alpha insig. 54 89
  Klebsiella michiganensis M5al BWI76_RS01585 transcriptional regulator strong 54 89
  Pantoea sp. MT58 IAI47_18055 DNA-binding protein HU-alpha strong 54 89
  Rahnella sp. WP5 EX31_RS16845 DNA-binding protein HU-alpha cofit 54 89
  Enterobacter asburiae PDN3 EX28DRAFT_4542 Bacterial nucleoid DNA-binding protein strong 54 89
  Enterobacter sp. TBS_079 MPMX20_00223 DNA-binding protein HU-alpha strong 54 89
  Pectobacterium carotovorum WPP14 HER17_RS20350 DNA-binding protein HU-alpha strong 54 89
  Alteromonas macleodii MIT1002 MIT1002_02756 hypothetical protein no data 51 90
  Serratia liquefaciens MT49 IAI46_01350 DNA-binding protein HU-alpha insig. 54 89
  Pseudomonas putida KT2440 PP_2303 DNA binding regulator, beta subunit B no data 51 90
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4045.1 DNA-binding protein HU-beta no data 52 90
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0103 Bacterial nucleoid DNA-binding protein no data 53 90
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4192 DNA-binding protein HU-alpha strong 53 89
  Shewanella amazonensis SB2B Sama_3158 histone-like DNA-binding protein (RefSeq) insig. 50 90
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07315 HU family DNA-binding protein no data 52 90
  Shewanella oneidensis MR-1 SO1797 DNA-binding protein, HU family (NCBI ptt file) no data 50 90
  Escherichia coli BL21 ECD_03877 HU, DNA-binding transcriptional regulator, alpha subunit cofit 52 89
  Escherichia fergusonii Becca EFB2_04611 DNA-binding protein HU-alpha cofit 52 89
  Escherichia coli ECOR27 NOLOHH_05490 hupA DNA-binding protein HU-alpha no data 52 89
  Escherichia coli ECOR38 HEPCGN_11980 hupA DNA-binding protein HU-alpha cofit 52 89
  Escherichia coli ECRC101 OKFHMN_13345 hupA DNA-binding protein HU-alpha strong 52 89
  Escherichia coli ECRC101 MCAODC_03845 hupA DNA-binding protein HU-alpha strong 52 89
  Escherichia coli ECRC102 NIAGMN_11095 hupA DNA-binding protein HU-alpha sig. 52 89
  Escherichia coli ECRC62 BNILDI_06035 hupA DNA-binding protein HU-alpha insig. 52 89
  Escherichia coli ECRC98 JDDGAC_16970 hupA DNA-binding protein HU-alpha no data 52 89
  Escherichia coli ECRC99 KEDOAH_14815 hupA DNA-binding protein HU-alpha no data 52 89
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04050 DNA-binding protein HU-alpha strong 52 89
  Escherichia coli Nissle 1917 ECOLIN_RS23070 nucleoid-associated protein HU-alpha no data 52 89
  Escherichia coli BW25113 b4000 hupA HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) strong 52 89
  Kangiella aquimarina DSM 16071 B158DRAFT_1039 Bacterial nucleoid DNA-binding protein strong 50 90
  Shewanella sp. ANA-3 Shewana3_2658 histone family protein DNA-binding protein (RefSeq) no data 49 90
  Rhodanobacter denitrificans MT42 LRK55_RS16465 HU family DNA-binding protein no data 50 90
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16740 HU family DNA-binding protein sig. 50 90
  Rhodanobacter sp. FW510-T8 OKGIIK_08025 himA integration host factor subunit alpha no data 50 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5425 DNA-binding protein HU-beta insig. 48 90
  Dickeya dadantii 3937 DDA3937_RS05655 DNA-binding protein HU-beta insig. 51 90
  Dickeya dianthicola 67-19 HGI48_RS05700 DNA-binding protein HU-beta insig. 51 90
  Dickeya dianthicola ME23 DZA65_RS06025 DNA-binding protein HU-beta insig. 51 90
  Pectobacterium carotovorum WPP14 HER17_RS15835 DNA-binding protein HU-beta insig. 50 90
  Burkholderia phytofirmans PsJN BPHYT_RS09465 transcriptional regulator insig. 49 90
  Rhodospirillum rubrum S1H Rru_A1553 Histone-like DNA-binding protein (NCBI) no data 51 91
  Pseudomonas fluorescens SBW25 PFLU_RS19155 HU family DNA-binding protein no data 50 90
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19155 HU family DNA-binding protein no data 50 90
  Pseudomonas simiae WCS417 PS417_17220 transcriptional regulator HU subunit alpha no data 50 90
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09020 HU family DNA-binding protein no data 49 90
  Ralstonia solanacearum UW163 UW163_RS04575 HU family DNA-binding protein no data 49 90
  Rahnella sp. WP5 EX31_RS22260 DNA-binding protein HU-beta insig. 50 90
  Serratia liquefaciens MT49 IAI46_05025 DNA-binding protein HU-beta insig. 49 90
  Vibrio cholerae E7946 ATCC 55056 CSW01_09600 DNA-binding protein HU-beta cofit 47 90
  Erwinia tracheiphila SCR3 LU632_RS18330 hupB DNA-binding protein HU-beta insig. 48 90
  Cupriavidus basilensis FW507-4G11 RR42_RS20390 DNA-binding protein no data 49 90
  Shewanella oneidensis MR-1 SO0548 DNA-binding protein, HU family (NCBI ptt file) insig. 48 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS21970 HU family DNA-binding protein insig. 49 90
  Herbaspirillum seropedicae SmR1 HSERO_RS01615 DNA-binding protein no data 47 90
  Shewanella sp. ANA-3 Shewana3_0547 histone family protein DNA-binding protein (RefSeq) cofit 48 90
  Shewanella amazonensis SB2B Sama_1227 HU family DNA-binding protein (RefSeq) no data 48 90
  Ralstonia solanacearum GMI1000 RS_RS16830 HU family DNA-binding protein insig. 48 91
  Ralstonia sp. UNC404CL21Col ABZR87_RS04295 HU family DNA-binding protein strong 48 91
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00899 bacterial nucleoid protein Hbs no data 48 90
  Paraburkholderia graminis OAS925 ABIE53_002118 DNA-binding protein HU-beta sig. 48 90
  Pantoea sp. MT58 IAI47_14640 DNA-binding protein HU-beta sig. 49 90
  Pseudomonas syringae pv. syringae B728a Psyr_1750 bacterial nucleoid protein HU beta subunit no data 49 90
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1750 bacterial nucleoid protein HU beta subunit no data 49 90
  Desulfovibrio vulgaris Miyazaki F DvMF_0500 histone family protein DNA-binding protein (RefSeq) insig. 51 89
  Escherichia coli BL21 ECD_00392 HU, DNA-binding transcriptional regulator, beta subunit strong 48 90
  Escherichia fergusonii Becca EFB2_03617 DNA-binding protein HU-beta insig. 48 90
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03233 DNA-binding protein HU-beta strong 48 90
  Escherichia coli BW25113 b0440 hupB HU, DNA-binding transcriptional regulator, beta subunit (NCBI) strong 48 90
  Ralstonia sp. UNC404CL21Col ABZR87_RS00650 HU family DNA-binding protein no data 49 88
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS05030 HU family DNA-binding protein no data 49 88
  Ralstonia solanacearum GMI1000 RS_RS12640 HU family DNA-binding protein no data 49 88
  Ralstonia solanacearum PSI07 RPSI07_RS12265 HU family DNA-binding protein no data 49 88
  Ralstonia solanacearum UW163 UW163_RS08595 HU family DNA-binding protein no data 49 88
  Magnetospirillum magneticum AMB-1 AMB_RS11020 HU family DNA-binding protein insig. 47 90