Homologs of PP_1906 from Pseudomonas putida KT2440

ribosomal large subunit pseudouridine synthase C
SEED: Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase C

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_1906 ribosomal large subunit pseudouridine synthase C strong 100 100
o Pseudomonas sp. BP01 JOY50_RS16830 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 99 100
o Pseudomonas sp. SVBP6 COO64_RS05845 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 94 100
o Pseudomonas syringae pv. syringae B728a Psyr_1639 ribosomal large subunit pseudouridine synthase C sig. 87 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1639 ribosomal large subunit pseudouridine synthase C insig. 87 100
o Pseudomonas sp. DMC3 GFF4765 Ribosomal large subunit pseudouridine synthase C cofit 87 100
o Pseudomonas sp. RS175 PFR28_03018 Ribosomal large subunit pseudouridine synthase C sig. 87 100
o Pseudomonas fluorescens FW300-N2C3 AO356_20125 23S rRNA pseudouridylate synthase strong 87 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5944 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 87 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04440 Ribosomal large subunit pseudouridine synthase C cofit 86 99
o Pseudomonas simiae WCS417 PS417_21480 23S rRNA pseudouridylate synthase strong 85 99
o Pseudomonas segetis P6 ACVTMO_RS10270 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 86 99
o Pseudomonas orientalis W4I3 QF045_RS23560 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 85 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_459 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) no data 85 100
o Pseudomonas fluorescens SBW25 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 85 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 85 99
o Pseudomonas fluorescens FW300-N2E3 AO353_01405 23S rRNA pseudouridylate synthase strong 84 100
o Pseudomonas stutzeri RCH2 Psest_1680 pseudouridine synthase, RluA family no data 86 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2097 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 86 97
o Pseudomonas sp. S08-1 OH686_22095 LSU rRNA pseudouridine(955/2504/2580) synthase cofit 84 99
o Pseudomonas aeruginosa PA14 IKLFDK_15135 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 82 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS33485 rluC;go_function=RNA 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 82 99
o Pseudomonas aeruginosa MRSN321 DY961_RS02100 rluC;go_function=RNA 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 81 99
o Pantoea sp. MT58 IAI47_12105 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 61 99
o Erwinia amylovora T8 OLJFJH_15565 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 62 96
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05230 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 60 99
o Pectobacterium carotovorum WPP14 HER17_RS08615 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 60 96
o Rahnella sp. WP5 EX31_RS24400 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 61 96
o Erwinia tracheiphila SCR3 LU632_RS14855 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 60 96
o Enterobacter sp. TBS_079 MPMX20_01766 Ribosomal large subunit pseudouridine synthase C sig. 60 95
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_00715 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 59 96
o Klebsiella pneumoniae MKP103 KDGMDA_18660 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 60 96
o Alteromonas macleodii MIT1002 MIT1002_01725 Ribosomal large subunit pseudouridine synthase C insig. 59 96
o Escherichia coli BL21 ECD_01082 23S rRNA pseudouridine(955,2504,2580) synthase strong 58 99
o Escherichia fergusonii Becca EFB2_02889 Ribosomal large subunit pseudouridine synthase C insig. 58 99
o Escherichia coli ECOR27 NOLOHH_21145 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 58 99
o Escherichia coli ECOR38 HEPCGN_23865 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 58 99
o Escherichia coli ECRC62 BNILDI_19305 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 58 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02580 Ribosomal large subunit pseudouridine synthase C strong 58 99
o Escherichia coli BW25113 b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) strong 58 99
o Escherichia coli Nissle 1917 ECOLIN_RS06280 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 58 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3366 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) cofit 58 99
o Escherichia coli ECRC100 OKFHMN_03615 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 58 99
o Escherichia coli ECRC101 MCAODC_22975 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 58 99
o Escherichia coli ECRC102 NIAGMN_24215 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 58 99
o Escherichia coli ECRC98 JDDGAC_07275 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 58 99
o Escherichia coli ECRC99 KEDOAH_24140 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC no data 58 99
o Enterobacter asburiae PDN3 EX28DRAFT_1844 pseudouridine synthase, RluA family insig. 58 99
o Shewanella loihica PV-4 Shew_1594 RluA family pseudouridine synthase (RefSeq) sig. 56 99
o Klebsiella michiganensis M5al BWI76_RS11050 23S rRNA pseudouridine(955/2504/2580) synthase strong 57 100
o Shewanella amazonensis SB2B Sama_1988 pseudouridylate synthase (RefSeq) strong 60 96
o Kangiella aquimarina DSM 16071 B158DRAFT_1770 ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) insig. 57 98
o Serratia liquefaciens MT49 IAI46_09755 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 62 96
o Dickeya dadantii 3937 DDA3937_RS13155 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 62 96
o Dickeya dianthicola ME23 DZA65_RS13690 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 59 99
o Dickeya dianthicola 67-19 HGI48_RS13220 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 59 99
o Shewanella sp. ANA-3 Shewana3_2566 ribosomal large subunit pseudouridine synthase C (RefSeq) sig. 55 99
o Marinobacter adhaerens HP15 HP15_2221 pseudouridine synthase, RluA family sig. 54 97
o Vibrio cholerae E7946 ATCC 55056 CSW01_10130 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 56 93
o Herbaspirillum seropedicae SmR1 HSERO_RS09415 ribosomal large subunit pseudouridine synthase C strong 51 93
o Rhodanobacter denitrificans MT42 LRK55_RS17750 RluA family pseudouridine synthase strong 51 95
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS17895 RluA family pseudouridine synthase strong 51 95
o Lysobacter sp. OAE881 ABIE51_RS11800 RluA family pseudouridine synthase cofit 54 93
o Paraburkholderia graminis OAS925 ABIE53_003058 23S rRNA pseudouridine955/2504/2580 synthase sig. 50 95
o Rhodanobacter sp. FW510-T8 OKGIIK_07405 rluA 23S rRNA pseudouridine(955/2504/2580) synthase sig. 50 90
o Paraburkholderia sabiae LMG 24235 QEN71_RS04500 RluA family pseudouridine synthase cofit 49 96
o Cupriavidus basilensis FW507-4G11 RR42_RS14155 pseudouridine synthase strong 51 92
o Dechlorosoma suillum PS Dsui_2437 pseudouridine synthase, RluA family strong 51 93
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2616.1 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) sig. 48 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04340 23S rRNA pseudouridine955/2504/2580 synthase insig. 49 95
o Ralstonia solanacearum PSI07 RPSI07_RS19085 RluA family pseudouridine synthase strong 49 92
o Ralstonia sp. UNC404CL21Col ABZR87_RS10090 RluA family pseudouridine synthase sig. 48 97
o Ralstonia solanacearum GMI1000 RS_RS05155 RluA family pseudouridine synthase strong 48 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14375 RluA family pseudouridine synthase strong 49 92
o Ralstonia solanacearum UW163 UW163_RS11840 RluA family pseudouridine synthase insig. 49 92
o Burkholderia phytofirmans PsJN BPHYT_RS14480 ribosomal large subunit pseudouridine synthase C sig. 48 96
o Variovorax sp. SCN45 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) insig. 50 92
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS02725 RluA family pseudouridine synthase sig. 52 87
o Variovorax sp. OAS795 ABID97_RS08250 RluA family pseudouridine synthase strong 52 92
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS11465 RluA family pseudouridine synthase no data 51 83
o Acidovorax sp. GW101-3H11 Ac3H11_1590 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 50 90
o Acinetobacter radioresistens SK82 MPMX26_00317 Ribosomal large subunit pseudouridine synthase C insig. 49 96
o Acinetobacter baumannii LAC-4 RR41_RS16980 RluA family pseudouridine synthase sig. 48 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF121 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) cofit 48 92
o Methylophilus sp. DMC18 GFF1177 Ribosomal large subunit pseudouridine synthase C insig. 46 94
o Castellaniella sp019104865 MT123 ABCV34_RS08415 RluA family pseudouridine synthase sig. 46 96
o Agrobacterium fabrum C58 Atu1471 ribosomal large subunit pseudouridine synthase C no data 38 93
o Rhizobium sp. OAE497 ABIE40_RS09915 RluA family pseudouridine synthase sig. 39 93
o Sinorhizobium meliloti 1021 SMc01275 ribosomal large subunit pseudouridine synthase C protein strong 35 93
o Rhodospirillum rubrum S1H Rru_A2659 Pseudouridine synthase, RluD (NCBI) no data 39 92
o Magnetospirillum magneticum AMB-1 AMB_RS15620 RluA family pseudouridine synthase cofit 38 93
  Rhodopseudomonas palustris CGA009 TX73_016595 RluA family pseudouridine synthase insig. 35 95
o Phaeobacter inhibens DSM 17395 PGA1_c01950 ribosomal large subunit pseudouridine synthase C no data 36 89
o Azospirillum sp. SherDot2 MPMX19_01718 Ribosomal large subunit pseudouridine synthase C insig. 36 95
  Bosea sp. OAE506 ABIE41_RS14710 RluA family pseudouridine synthase insig. 35 93
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07865 RluA family pseudouridine synthase cofit 35 95
  Sphingobium sp. HT1-2 GFF3074 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) cofit 35 93
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1033 pseudouridine synthase, RluA family no data 33 97
o Dinoroseobacter shibae DFL-12 Dshi_0315 pseudouridine synthase, RluA family (RefSeq) insig. 36 97
o Caulobacter crescentus NA1000 CCNA_02059 ribosomal large subunit pseudouridine synthase C strong 35 89