Homologs of PP_1906 from Pseudomonas putida KT2440

ribosomal large subunit pseudouridine synthase C
SEED: Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase C

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_1906 ribosomal large subunit pseudouridine synthase C strong 100 100
o Pseudomonas sp. BP01 JOY50_RS16830 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 99 100
o Pseudomonas sp. SVBP6 COO64_RS05845 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 94 100
o Pseudomonas syringae pv. syringae B728a Psyr_1639 ribosomal large subunit pseudouridine synthase C sig. 87 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1639 ribosomal large subunit pseudouridine synthase C insig. 87 100
o Pseudomonas sp. DMC3 GFF4765 Ribosomal large subunit pseudouridine synthase C cofit 87 100
o Pseudomonas sp. RS175 PFR28_03018 Ribosomal large subunit pseudouridine synthase C sig. 87 100
o Pseudomonas fluorescens FW300-N2C3 AO356_20125 23S rRNA pseudouridylate synthase strong 87 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5944 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 87 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04440 Ribosomal large subunit pseudouridine synthase C cofit 86 99
o Pseudomonas simiae WCS417 PS417_21480 23S rRNA pseudouridylate synthase strong 85 99
o Pseudomonas segetis P6 ACVTMO_RS10270 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 86 99
o Pseudomonas orientalis W4I3 QF045_RS23560 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 85 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_459 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) no data 85 100
o Pseudomonas fluorescens SBW25 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 85 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 85 99
o Pseudomonas fluorescens FW300-N2E3 AO353_01405 23S rRNA pseudouridylate synthase strong 84 100
o Pseudomonas stutzeri RCH2 Psest_1680 pseudouridine synthase, RluA family no data 86 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2097 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 86 97
o Pseudomonas sp. S08-1 OH686_22095 LSU rRNA pseudouridine(955/2504/2580) synthase cofit 84 99
o Pseudomonas aeruginosa PA14 IKLFDK_15135 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 82 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS33485 rluC;go_function=RNA 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 82 99
o Pseudomonas aeruginosa MRSN321 DY961_RS02100 rluC;go_function=RNA 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 81 99
o Pantoea sp. MT58 IAI47_12105 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 61 99
o Erwinia amylovora T8 OLJFJH_15565 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 62 96
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05230 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 60 99
o Pectobacterium carotovorum WPP14 HER17_RS08615 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 60 96
o Rahnella sp. WP5 EX31_RS24400 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 61 96
o Erwinia tracheiphila SCR3 LU632_RS14855 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 60 96
o Enterobacter sp. TBS_079 MPMX20_01766 Ribosomal large subunit pseudouridine synthase C sig. 60 95
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_00715 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 59 96
o Klebsiella pneumoniae MKP103 KDGMDA_18660 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 60 96
o Alteromonas macleodii MIT1002 MIT1002_01725 Ribosomal large subunit pseudouridine synthase C insig. 59 96
o Escherichia coli BL21 ECD_01082 23S rRNA pseudouridine(955,2504,2580) synthase strong 58 99
o Escherichia fergusonii Becca EFB2_02889 Ribosomal large subunit pseudouridine synthase C insig. 58 99
o Escherichia coli ECOR27 NOLOHH_21145 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 58 99
o Escherichia coli ECOR38 HEPCGN_23865 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 58 99
o Escherichia coli ECRC62 BNILDI_19305 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 58 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02580 Ribosomal large subunit pseudouridine synthase C strong 58 99
o Escherichia coli BW25113 b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) strong 58 99
o Klebsiella pneumoniae MRSN742743 KFA93_RS00230 rluC;go_function=RNA 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 60 96
o Escherichia coli Nissle 1917 ECOLIN_RS06280 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 58 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3366 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) cofit 58 99
o Escherichia coli ECRC100 OKFHMN_03615 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 58 99
o Escherichia coli ECRC101 MCAODC_22975 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 58 99
o Escherichia coli ECRC102 NIAGMN_24215 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 58 99
o Escherichia coli ECRC98 JDDGAC_07275 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 58 99
o Escherichia coli ECRC99 KEDOAH_24140 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC no data 58 99
o Enterobacter asburiae PDN3 EX28DRAFT_1844 pseudouridine synthase, RluA family insig. 58 99
o Shewanella loihica PV-4 Shew_1594 RluA family pseudouridine synthase (RefSeq) sig. 56 99
o Klebsiella michiganensis M5al BWI76_RS11050 23S rRNA pseudouridine(955/2504/2580) synthase strong 57 100
o Shewanella amazonensis SB2B Sama_1988 pseudouridylate synthase (RefSeq) strong 60 96
o Kangiella aquimarina DSM 16071 B158DRAFT_1770 ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) insig. 57 98
o Serratia liquefaciens MT49 IAI46_09755 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 62 96
o Dickeya dadantii 3937 DDA3937_RS13155 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 62 96
o Dickeya dianthicola ME23 DZA65_RS13690 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 59 99
o Dickeya dianthicola 67-19 HGI48_RS13220 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 59 99
o Shewanella sp. ANA-3 Shewana3_2566 ribosomal large subunit pseudouridine synthase C (RefSeq) sig. 55 99
o Marinobacter adhaerens HP15 HP15_2221 pseudouridine synthase, RluA family sig. 54 97
o Vibrio cholerae E7946 ATCC 55056 CSW01_10130 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 56 93
o Herbaspirillum seropedicae SmR1 HSERO_RS09415 ribosomal large subunit pseudouridine synthase C strong 51 93
o Rhodanobacter denitrificans MT42 LRK55_RS17750 RluA family pseudouridine synthase strong 51 95
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS17895 RluA family pseudouridine synthase strong 51 95
o Lysobacter sp. OAE881 ABIE51_RS11800 RluA family pseudouridine synthase cofit 54 93
o Paraburkholderia graminis OAS925 ABIE53_003058 23S rRNA pseudouridine955/2504/2580 synthase sig. 50 95
o Rhodanobacter sp. FW510-T8 OKGIIK_07405 rluA 23S rRNA pseudouridine(955/2504/2580) synthase sig. 50 90
o Paraburkholderia sabiae LMG 24235 QEN71_RS04500 RluA family pseudouridine synthase cofit 49 96
o Cupriavidus basilensis FW507-4G11 RR42_RS14155 pseudouridine synthase strong 51 92
o Dechlorosoma suillum PS Dsui_2437 pseudouridine synthase, RluA family strong 51 93
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2616.1 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) sig. 48 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04340 23S rRNA pseudouridine955/2504/2580 synthase insig. 49 95
o Ralstonia solanacearum PSI07 RPSI07_RS19085 RluA family pseudouridine synthase strong 49 92
o Ralstonia sp. UNC404CL21Col ABZR87_RS10090 RluA family pseudouridine synthase sig. 48 97
o Ralstonia solanacearum GMI1000 RS_RS05155 RluA family pseudouridine synthase strong 48 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14375 RluA family pseudouridine synthase strong 49 92
o Ralstonia solanacearum UW163 UW163_RS11840 RluA family pseudouridine synthase insig. 49 92
o Burkholderia phytofirmans PsJN BPHYT_RS14480 ribosomal large subunit pseudouridine synthase C sig. 48 96
o Variovorax sp. SCN45 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) insig. 50 92
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS02725 RluA family pseudouridine synthase sig. 52 87
o Variovorax sp. OAS795 ABID97_RS08250 RluA family pseudouridine synthase strong 52 92
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS11465 RluA family pseudouridine synthase no data 51 83
o Acidovorax sp. GW101-3H11 Ac3H11_1590 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 50 90
o Acinetobacter radioresistens SK82 MPMX26_00317 Ribosomal large subunit pseudouridine synthase C insig. 49 96
o Acinetobacter baumannii LAC-4 RR41_RS16980 RluA family pseudouridine synthase sig. 48 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF121 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) cofit 48 92
o Methylophilus sp. DMC18 GFF1177 Ribosomal large subunit pseudouridine synthase C insig. 46 94
o Castellaniella sp019104865 MT123 ABCV34_RS08415 RluA family pseudouridine synthase sig. 46 96
o Agrobacterium fabrum C58 Atu1471 ribosomal large subunit pseudouridine synthase C no data 38 93
o Rhizobium sp. OAE497 ABIE40_RS09915 RluA family pseudouridine synthase sig. 39 93
o Sinorhizobium meliloti 1021 SMc01275 ribosomal large subunit pseudouridine synthase C protein strong 35 93
o Rhodospirillum rubrum S1H Rru_A2659 Pseudouridine synthase, RluD (NCBI) no data 39 92
o Magnetospirillum magneticum AMB-1 AMB_RS15620 RluA family pseudouridine synthase cofit 38 93
  Rhodopseudomonas palustris CGA009 TX73_016595 RluA family pseudouridine synthase insig. 35 95
  Phaeobacter inhibens DSM 17395 PGA1_c01950 ribosomal large subunit pseudouridine synthase C no data 36 89
  Azospirillum sp. SherDot2 MPMX19_01718 Ribosomal large subunit pseudouridine synthase C insig. 36 95
  Bosea sp. OAE506 ABIE41_RS14710 RluA family pseudouridine synthase insig. 35 93
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07865 RluA family pseudouridine synthase cofit 35 95
  Sphingobium sp. HT1-2 GFF3074 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) cofit 35 93
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1033 pseudouridine synthase, RluA family no data 33 97
  Dinoroseobacter shibae DFL-12 Dshi_0315 pseudouridine synthase, RluA family (RefSeq) insig. 36 97
  Caulobacter crescentus NA1000 CCNA_02059 ribosomal large subunit pseudouridine synthase C strong 35 89
  Caulobacter crescentus NA1000 Δfur CCNA_02059 ribosomal large subunit pseudouridine synthase C cofit 35 89
  Azospirillum brasilense Sp245 AZOBR_RS06905 pseudouridine synthase strong 33 96
  Fusobacterium nucleatum SB010 HUW76_04985 RluA family pseudouridine synthase cofit 31 91
  Rhizobium sp. OAE497 ABIE40_RS14790 RluA family pseudouridine synthase sig. 33 93
  Desulfovibrio vulgaris Hildenborough JW710 DVU3191 rluC ribosomal large subunit pseudouridine synthase C (TIGR) sig. 34 88
  Xanthobacter sp. DMC5 GFF1347 Ribosomal large subunit pseudouridine synthase C insig. 31 93
  Sinorhizobium meliloti 1021 SMc00647 ribosomal large subunit pseudouridine synthase strong 33 93
  Cellulophaga baltica 18 M666_RS09010 RluA family pseudouridine synthase sig. 35 77
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0642 pseudouridine synthase, RluA family strong 32 82
  Bacteroides stercoris CC31F HMPREF1181_RS03250 RluA family pseudouridine synthase strong 34 76
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12640 RluA family pseudouridine synthase strong 32 84
  Lysobacter sp. OAE881 ABIE51_RS04885 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 33 96
  Phocaeicola dorei CL03T12C01 ABI39_RS18705 RluA family pseudouridine synthase insig. 37 67
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14415 pseudouridine synthase strong 32 76
  Phocaeicola dorei CL03T12C01 ABI39_RS02845 RluA family pseudouridine synthase strong 30 92
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08615 RluA family pseudouridine synthase strong 30 92
  Paraburkholderia sabiae LMG 24235 QEN71_RS22215 RluA family pseudouridine synthase no data 33 90
  Agrobacterium fabrum C58 Atu2443 ribosomal large subunit pseudouridine synthase, RluD subfamily no data 33 89
  Caulobacter crescentus NA1000 CCNA_01343 ribosomal large subunit pseudouridine synthase C sig. 36 71
  Caulobacter crescentus NA1000 Δfur CCNA_01343 ribosomal large subunit pseudouridine synthase C cofit 36 71
  Bacteroides thetaiotaomicron VPI-5482 BT3712 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) strong 34 76
  Azospirillum sp. SherDot2 MPMX19_05442 Ribosomal large subunit pseudouridine synthase D strong 33 93
  Bacteroides ovatus ATCC 8483 BACOVA_03528 pseudouridine synthase, RluA family strong 34 76
  Shewanella loihica PV-4 Shew_2950 RluA family pseudouridine synthase (RefSeq) strong 33 92
  Pseudomonas sp. DMC3 GFF4004 Ribosomal large subunit pseudouridine synthase D cofit 32 94
  Marinobacter adhaerens HP15 HP15_527 pseudouridine synthase, RluA family strong 33 94
  Azospirillum brasilense Sp245 AZOBR_RS08300 pseudouridine synthase insig. 37 64
  Burkholderia phytofirmans PsJN BPHYT_RS09135 ribosomal large subunit pseudouridine synthase D sig. 32 92
  Magnetospirillum magneticum AMB-1 AMB_RS16095 RluA family pseudouridine synthase insig. 35 79
  Acinetobacter baumannii LAC-4 RR41_RS15070 23S rRNA pseudouridine(1911/1915/1917) synthase RluD insig. 31 99
  Ralstonia sp. UNC404CL21Col ABZR87_RS13315 RluA family pseudouridine synthase strong 35 79
  Sphingobium sp. HT1-2 GFF4062 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 34 87
  Rhodospirillum rubrum S1H Rru_A1111 Pseudouridine synthase, RluD (NCBI) strong 33 89
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4870 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 33 92
  Pseudomonas sp. BP01 JOY50_RS27130 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 32 92
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03985 RluA family pseudouridine synthase sig. 31 76
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05180 RluA family pseudouridine synthase insig. 35 69
  Pseudomonas syringae pv. syringae B728a Psyr_0726 ribosomal large subunit pseudouridine synthase D strong 33 79
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0726 ribosomal large subunit pseudouridine synthase D strong 33 79
  Pseudomonas fluorescens FW300-N2E3 AO353_14220 ribosomal large subunit pseudouridine synthase D strong 33 79
  Pseudomonas putida KT2440 PP_0623 23S rRNA pseudouridine(1911,1915,1917) synthase no data 32 92
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00969 Ribosomal large subunit pseudouridine synthase D cofit 31 92
  Pseudomonas orientalis W4I3 QF045_RS06805 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 31 92
  Pseudomonas fluorescens FW300-N2C3 AO356_15925 ribosomal large subunit pseudouridine synthase D strong 31 94
  Dechlorosoma suillum PS Dsui_2530 pseudouridine synthase, RluA family sig. 32 96
  Paraburkholderia graminis OAS925 ABIE53_002062 23S rRNA pseudouridine1911/1915/1917 synthase strong 32 91
  Ralstonia solanacearum PSI07 RPSI07_RS15970 RluA family pseudouridine synthase insig. 35 79
  Pseudomonas sp. SVBP6 COO64_RS11055 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 33 79
  Pseudomonas aeruginosa MRSN321 DY961_RS23730 rluD;go_function=RNA 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 31 94
  Pseudomonas aeruginosa PA14 IKLFDK_00810 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 31 94
  Pseudomonas aeruginosa PUPa3 DQ20_RS56195 rluD;go_function=RNA 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 31 94
  Pseudomonas simiae WCS417 PS417_03820 ribosomal large subunit pseudouridine synthase D no data 33 79
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15205 RNA pseudouridine synthase strong 32 76
  Pseudomonas fluorescens SBW25 PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD insig. 31 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 31 92
  Ralstonia solanacearum GMI1000 RS_RS08205 RluA family pseudouridine synthase sig. 34 79
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00848 ribosomal large subunit pseudouridine synthase D (EC 5.4.99.-) insig. 32 89
  Azospirillum sp. SherDot2 MPMX19_03163 hypothetical protein insig. 35 63
  Xanthobacter sp. DMC5 GFF2508 Ribosomal large subunit pseudouridine synthase D insig. 33 79
  Desulfovibrio vulgaris Miyazaki F DvMF_0912 pseudouridine synthase, RluA family (RefSeq) no data 32 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2822 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 33 77
  Rahnella sp. WP5 EX31_RS07570 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 32 97
  Bosea sp. OAE506 ABIE41_RS05635 RluA family pseudouridine synthase sig. 32 89
  Fusobacterium nucleatum SB010 HUW76_08575 RluA family pseudouridine synthase strong 29 88
  Synechocystis sp000284455 PCC 6803 SGL_RS11530 RluA family pseudouridine synthase strong 33 89
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS05045 23S rRNA pseudouridine(1911/1915/1917) synthase RluD insig. 32 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1493 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 30 92
  Pseudomonas segetis P6 ACVTMO_RS19440 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 31 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5127 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 30 92
  Methylophilus sp. DMC18 GFF1213 Ribosomal large subunit pseudouridine synthase D insig. 33 90
  Herbaspirillum seropedicae SmR1 HSERO_RS15070 ribosomal large subunit pseudouridine synthase D insig. 32 78
  Synechococcus elongatus PCC 7942 Synpcc7942_1112 ribosomal large subunit pseudouridine synthase D strong 32 90
  Pseudomonas sp. S08-1 OH686_16410 LSU rRNA pseudouridine(1911/1915/1917) synthase cofit 31 94
  Bacteroides stercoris CC31F HMPREF1181_RS13725 RNA pseudouridine synthase insig. 38 63
  Magnetospirillum magneticum AMB-1 AMB_RS17255 RNA pseudouridine synthase insig. 37 67
  Pseudomonas stutzeri RCH2 Psest_2948 pseudouridine synthase, RluA family sig. 37 65
  Shewanella sp. ANA-3 Shewana3_0799 ribosomal large subunit pseudouridine synthase A (RefSeq) insig. 36 63
  Rhodanobacter sp. FW510-T8 OKGIIK_13270 pseudouridylate synthase insig. 35 69
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01520 RluA family pseudouridine synthase insig. 34 79
  Ralstonia solanacearum UW163 UW163_RS14830 RluA family pseudouridine synthase insig. 34 79
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07880 RluA family pseudouridine synthase insig. 33 72
  Pseudomonas stutzeri RCH2 Psest_0709 pseudouridine synthase, RluA family strong 31 97
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0664 pseudouridine synthase, RluA family strong 33 93
  Pseudomonas sp. RS175 PFR28_03748 Ribosomal large subunit pseudouridine synthase D strong 30 92
  Alteromonas macleodii MIT1002 MIT1002_02679 Ribosomal large subunit pseudouridine synthase D cofit 32 95
  Rhodanobacter sp. FW510-T8 OKGIIK_01790 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 32 90
  Synechococcus elongatus PCC 7942 Synpcc7942_1374 rluA ribosomal large subunit pseudouridine synthase D sig. 36 67
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19675 RNA pseudouridine synthase strong 33 69
  Pseudomonas sp. S08-1 OH686_19760 LSU rRNA pseudouridine(746) synthase or tRNA pseudouridine(32) synthase insig. 36 65
  Xanthobacter sp. DMC5 GFF3765 hypothetical protein insig. 34 69
  Rhodanobacter denitrificans MT42 LRK55_RS04745 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 31 87
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 31 87
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1362.1 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 31 96
  Bacteroides ovatus ATCC 8483 BACOVA_05306 pseudouridine synthase, RluA family insig. 35 68
  Escherichia fergusonii Becca EFB2_01296 Ribosomal large subunit pseudouridine synthase D sig. 32 93
  Escherichia coli Nissle 1917 ECOLIN_RS14675 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 32 93
  Shewanella sp. ANA-3 Shewana3_3171 ribosomal large subunit pseudouridine synthase D (RefSeq) strong 36 68
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS10965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 33 77
  Variovorax sp. SCN45 GFF988 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 33 86
  Acidovorax sp. GW101-3H11 Ac3H11_1787 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 32 92
  Vibrio cholerae E7946 ATCC 55056 CSW01_03695 ribosomal large subunit pseudouridine synthase D strong 32 89
  Escherichia coli ECOR27 NOLOHH_12925 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 32 93
  Escherichia coli ECOR38 HEPCGN_20375 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 32 93
  Escherichia coli ECRC62 BNILDI_11730 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 32 93
  Escherichia coli BL21 ECD_02484 23S rRNA pseudouridine(1911,1915,1917) synthase strong 31 93
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01112 Ribosomal large subunit pseudouridine synthase D sig. 31 93
  Escherichia coli BW25113 b2594 rluD 23S rRNA pseudouridine synthase (NCBI) no data 31 93
  Pectobacterium carotovorum WPP14 HER17_RS05400 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 32 92
  Escherichia coli ECRC100 OKFHMN_21250 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 31 93
  Escherichia coli ECRC101 MCAODC_11780 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 31 93
  Escherichia coli ECRC102 NIAGMN_19020 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 31 93
  Escherichia coli ECRC98 JDDGAC_24915 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 31 93
  Escherichia coli ECRC99 KEDOAH_06970 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD no data 31 93
  Phaeobacter inhibens DSM 17395 PGA1_c33080 ribosomal large subunit pseudouridine synthase A sig. 37 65
  Shewanella loihica PV-4 Shew_0783 pseudouridylate synthase (RefSeq) no data 37 62
  Shewanella amazonensis SB2B Sama_2605 pseudouridylate synthase (RefSeq) no data 35 67
  Serratia liquefaciens MT49 IAI46_03985 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 31 91
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16540 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 31 97
  Klebsiella pneumoniae MKP103 KDGMDA_02140 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 31 93
  Klebsiella pneumoniae MRSN742743 KFA93_RS24575 rluD;go_function=RNA 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 31 93
  Dickeya dadantii 3937 DDA3937_RS16110 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 31 97
  Dickeya dianthicola ME23 DZA65_RS17330 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 31 97
  Erwinia amylovora T8 OLJFJH_09725 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 31 95
  Dickeya dianthicola 67-19 HGI48_RS16235 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 31 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4182 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) strong 31 93
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04097 Dual-specificity RNA pseudouridine synthase RluA cofit 35 65
  Pseudomonas simiae WCS417 PS417_19475 pseudouridine synthase sig. 35 65
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4194 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 35 65
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13460 pseudouridine synthase insig. 35 69
  Vibrio cholerae E7946 ATCC 55056 CSW01_04555 tRNA pseudouridine(65) synthase TruC insig. 34 67
  Pantoea sp. MT58 IAI47_16060 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 34 66
  Desulfovibrio vulgaris Hildenborough JW710 DVU1024 rluD/coaE ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase (TIGR) insig. 34 88
  Magnetospirillum magneticum AMB-1 AMB_RS19265 RNA pseudouridine synthase cofit 33 66
  Pantoea sp. MT58 IAI47_04425 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 31 97
  Pseudomonas fluorescens SBW25 PFLU_RS21445 RluA family pseudouridine synthase insig. 35 65
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21445 RluA family pseudouridine synthase sig. 35 65
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3753 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) sig. 35 65
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09185 RNA pseudouridine synthase no data 34 69
  Klebsiella michiganensis M5al BWI76_RS21450 23S rRNA pseudouridine(1911/1915/1917) synthase sig. 31 93
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_17320 truC tRNA pseudouridine(65) synthase TruC cofit 32 68
  Erwinia tracheiphila SCR3 LU632_RS06295 truC tRNA pseudouridine(65) synthase TruC insig. 32 68
  Shewanella amazonensis SB2B Sama_2197 pseudouridylate synthase (RefSeq) insig. 37 62
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS03400 pseudouridine synthase insig. 34 69
  Klebsiella michiganensis M5al BWI76_RS04565 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA sig. 35 66
  Pseudomonas fluorescens FW300-N2C3 AO356_19405 pseudouridine synthase insig. 34 65
  Enterobacter asburiae PDN3 EX28DRAFT_2695 pseudouridine synthase, RluA family cofit 30 93
  Escherichia coli ECRC62 BNILDI_08455 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 35 66
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03600 Ribosomal large subunit pseudouridine synthase A insig. 35 66
  Escherichia coli BW25113 b0058 rluA pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) (NCBI) sig. 35 66