Homologs of MMP_RS03885 from Methanococcus maripaludis S2

tyrosine-type recombinase/integrase
SEED: Probable integrase/recombinase
KEGG: integrase/recombinase XerD

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Methanococcus maripaludis S2 MMP_RS03885 tyrosine-type recombinase/integrase insig. 100 100
  Methanococcus maripaludis JJ MMJJ_RS02430 tyrosine-type recombinase/integrase no data 51 99
  Methanococcus maripaludis S2 MMP_RS02510 site-specific integrase sig. 52 100
  Methanococcus maripaludis JJ MMJJ_RS04325 tyrosine-type recombinase/integrase insig. 50 96
  Methanococcus maripaludis JJ MMJJ_RS02375 site-specific integrase insig. 48 92
  Methanococcus maripaludis JJ MMJJ_RS01095 site-specific integrase insig. 32 90
o Paraburkholderia sabiae LMG 24235 QEN71_RS44390 site-specific integrase insig. 27 84
o Shewanella oneidensis MR-1 SO2037 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 24 87
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3270 Site-specific recombinase XerD insig. 25 87
o Bacteroides thetaiotaomicron VPI-5482 BT2843 integrase (NCBI ptt file) strong 24 89
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09520 site-specific tyrosine recombinase XerD sig. 27 87
o Bacteroides stercoris CC31F HMPREF1181_RS01250 site-specific tyrosine recombinase XerD insig. 25 89
  Bacteroides ovatus ATCC 8483 BACOVA_01050 site-specific recombinase, phage integrase family/ribosomal subunit interface protein insig. 29 52
  Cellulophaga baltica 18 M666_RS09150 tyrosine-type recombinase/integrase sig. 26 68
  Bacteroides ovatus ATCC 8483 BACOVA_02123 tyrosine recombinase XerD strong 24 88
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00850 site-specific tyrosine recombinase XerD no data 27 73
  Paraburkholderia sabiae LMG 24235 QEN71_RS44605 tyrosine-type recombinase/integrase insig. 24 83
  Acinetobacter radioresistens SK82 MPMX26_00169 Tyrosine recombinase XerD no data 30 50
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS04705 site-specific tyrosine recombinase XerD strong 24 83
  Bifidobacterium breve UCC2003 BBR_RS16655 tyrosine recombinase XerC strong 32 48
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1809 tyrosine recombinase XerD insig. 25 87
o Methylophilus sp. DMC18 GFF2342 Tyrosine recombinase XerD insig. 23 85
  Klebsiella pneumoniae MKP103 KDGMDA_00325 class 1 integron integrase IntI1 no data 23 76
  Sphingobium sp. HT1-2 GFF5327 Integron integrase IntI1 cofit 23 76
o Kangiella aquimarina DSM 16071 B158DRAFT_2265 tyrosine recombinase XerD strong 25 85
o Rahnella sp. WP5 EX31_RS13480 site-specific tyrosine recombinase XerD strong 24 90
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS10885 tyrosine recombinase XerC strong 29 48
  Vibrio cholerae E7946 ATCC 55056 CSW01_15405 integron integrase insig. 26 77
o Desulfovibrio vulgaris Miyazaki F DvMF_0359 tyrosine recombinase XerD (RefSeq) strong 27 70
o Escherichia coli BL21 ECD_03687 site-specific tyrosine recombinase sig. 24 87
  Bacteroides thetaiotaomicron VPI-5482 BT2742 integrase, site-specific recombinase (NCBI ptt file) insig. 29 48
  Kangiella aquimarina DSM 16071 B158DRAFT_0342 integron integrase insig. 25 76
  Synechocystis sp000284455 PCC 6803 SGL_RS00045 site-specific integrase no data 28 47
  Synechocystis sp000284455 PCC 6803 SGL_RS01870 site-specific integrase insig. 28 47
  Cellulophaga baltica 18 M666_RS11310 site-specific tyrosine recombinase XerD sig. 27 69
o Escherichia coli ECOR27 NOLOHH_06550 xerC tyrosine recombinase XerC insig. 24 87
o Escherichia coli ECOR38 HEPCGN_13125 xerC tyrosine recombinase XerC cofit 24 87
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04239 Tyrosine recombinase XerC insig. 24 87
o Escherichia coli Nissle 1917 ECOLIN_RS21875 tyrosine recombinase XerC strong 24 87
o Escherichia coli BW25113 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) strong 24 87
o Escherichia coli ECRC62 BNILDI_04985 xerC tyrosine recombinase XerC insig. 24 87
o Klebsiella pneumoniae MKP103 KDGMDA_09700 tyrosine recombinase XerC sig. 24 87
  Acinetobacter baumannii LAC-4 RR41_RS17765 site-specific tyrosine recombinase XerD no data 31 48
  Klebsiella pneumoniae MKP103 KDGMDA_04300 site-specific tyrosine recombinase XerD sig. 30 48
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02835 integrase strong 28 49
  Dinoroseobacter shibae DFL-12 Dshi_3629 integrase family protein (RefSeq) no data 25 89
  Dinoroseobacter shibae DFL-12 Dshi_3661 integrase family protein (RefSeq) no data 25 89
  Pseudomonas sp. RS175 PFR28_00331 Tyrosine recombinase XerD strong 25 69
  Paraburkholderia sabiae LMG 24235 QEN71_RS39870 tyrosine-type recombinase/integrase insig. 22 92
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09695 integrase strong 29 48
  Serratia liquefaciens MT49 IAI46_20730 site-specific tyrosine recombinase XerD insig. 29 48
  Escherichia coli ECRC102 NIAGMN_17335 xerD site-specific tyrosine recombinase XerD no data 26 65
  Dickeya dianthicola 67-19 HGI48_RS03440 site-specific tyrosine recombinase XerD insig. 24 82
  Dickeya dianthicola ME23 DZA65_RS03485 site-specific tyrosine recombinase XerD no data 24 82
o Escherichia coli ECRC100 OKFHMN_14420 xerC tyrosine recombinase XerC insig. 23 87
o Escherichia coli ECRC101 MCAODC_04925 xerC tyrosine recombinase XerC no data 23 87
o Escherichia coli ECRC102 NIAGMN_12175 xerC tyrosine recombinase XerC no data 23 87
o Escherichia coli ECRC98 JDDGAC_18045 xerC tyrosine recombinase XerC no data 23 87
o Escherichia coli ECRC99 KEDOAH_13730 xerC tyrosine recombinase XerC no data 23 87
  Klebsiella michiganensis M5al BWI76_RS23815 site-specific tyrosine recombinase XerD no data 30 48
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1721 Tyrosine recombinase XerD strong 24 80
  Ralstonia solanacearum UW163 UW163_RS23220 recombinase XerC insig. 23 82
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08890 site-specific integrase insig. 22 90
o Escherichia fergusonii Becca EFB2_04826 Tyrosine recombinase XerC strong 23 87
  Alteromonas macleodii MIT1002 MIT1002_00786 Tyrosine recombinase XerD insig. 30 50
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17800 tyrosine-type recombinase/integrase insig. 21 88
  Sinorhizobium meliloti 1021 SMc00691 site-specific tyrosine recombinase XerD sig. 27 72
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00821 Tyrosine recombinase XerD sig. 26 65
  Escherichia coli BL21 ECD_02726 site-specific tyrosine recombinase strong 26 65
  Escherichia fergusonii Becca EFB2_01007 Tyrosine recombinase XerD strong 26 65
  Escherichia coli Nissle 1917 ECOLIN_RS16125 site-specific tyrosine recombinase XerD strong 26 65
  Escherichia coli BW25113 b2894 xerD site-specific tyrosine recombinase XerD (NCBI) strong 26 65
  Escherichia coli ECOR38 HEPCGN_18860 xerD site-specific tyrosine recombinase XerD strong 26 65
  Pectobacterium carotovorum WPP14 HER17_RS17890 site-specific tyrosine recombinase XerD strong 29 48
  Bifidobacterium breve UCC2003 BBR_RS16755 site-specific tyrosine recombinase XerD strong 27 55
  Escherichia coli ECOR27 NOLOHH_11495 xerD site-specific tyrosine recombinase XerD insig. 26 65
  Escherichia coli ECRC100 OKFHMN_19570 xerD site-specific tyrosine recombinase XerD no data 26 65
  Escherichia coli ECRC101 MCAODC_10090 xerD site-specific tyrosine recombinase XerD no data 26 65
  Escherichia coli ECRC62 BNILDI_10025 xerD site-specific tyrosine recombinase XerD insig. 26 65
  Escherichia coli ECRC98 JDDGAC_23210 xerD site-specific tyrosine recombinase XerD no data 26 65
  Escherichia coli ECRC99 KEDOAH_08570 xerD site-specific tyrosine recombinase XerD no data 26 65
  Pseudomonas fluorescens FW300-N2C3 AO356_06385 recombinase XerD strong 25 69
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3011 Tyrosine recombinase XerD insig. 24 80
  Erwinia amylovora T8 OLJFJH_08835 site-specific tyrosine recombinase XerD strong 27 48
  Vibrio cholerae E7946 ATCC 55056 CSW01_12250 site-specific tyrosine recombinase XerD strong 27 49
  Pseudomonas fluorescens SBW25 PFLU_RS24560 site-specific tyrosine recombinase XerD sig. 25 69
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24560 site-specific tyrosine recombinase XerD strong 25 69
  Azospirillum brasilense Sp245 AZOBR_RS24420 integrase insig. 23 92
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2991 Tyrosine recombinase XerD cofit 30 48
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19035 integrase no data 23 88
  Pseudomonas segetis P6 MPMX49_01575 Tyrosine recombinase XerD cofit 28 48
  Bacteroides stercoris CC31F HMPREF1181_RS09900 site-specific integrase insig. 25 86
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0028 Site-specific recombinase XerD no data 25 76
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2549 Site-specific recombinase XerD no data 25 76
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4348 Site-specific recombinase XerD no data 25 76
o Enterobacter asburiae PDN3 EX28DRAFT_4480 tyrosine recombinase XerC no data 23 87
  Enterobacter asburiae PDN3 EX28DRAFT_2945 tyrosine recombinase XerD insig. 29 48
  Enterobacter sp. TBS_079 MPMX20_03753 Tyrosine recombinase XerD strong 29 48
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04729 Tyrosine recombinase XerD cofit 29 47
  Pseudomonas sp. DMC3 GFF1987 Tyrosine recombinase XerD insig. 24 69