Homologs of LRK53_RS03400 from Rhodanobacter sp000427505 FW510-R12

pseudouridine synthase
KEGG: tRNA pseudouridine synthase C

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS03400 pseudouridine synthase insig. 100 100
o Rhodanobacter sp. FW510-T8 OKGIIK_13270 pseudouridylate synthase insig. 89 97
o Rhodanobacter denitrificans MT42 LRK55_RS10270 pseudouridine synthase insig. 83 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10630 pseudouridine synthase insig. 84 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13460 pseudouridine synthase insig. 78 97
o Dechlorosoma suillum PS Dsui_3127 23S RNA-specific pseudouridylate synthase insig. 50 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_04555 tRNA pseudouridine(65) synthase TruC insig. 44 99
o Klebsiella pneumoniae MKP103 KDGMDA_03375 tRNA pseudouridine(65) synthase TruC insig. 46 97
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.296.1 tRNA pseudouridine synthase C (EC 4.2.1.70) insig. 47 98
o Escherichia coli ECOR27 NOLOHH_12090 truC tRNA pseudouridine(65) synthase TruC insig. 46 97
o Escherichia coli ECRC62 BNILDI_10595 truC tRNA pseudouridine(65) synthase TruC insig. 46 97
o Pectobacterium carotovorum WPP14 HER17_RS16365 tRNA pseudouridine(65) synthase TruC insig. 45 99
o Lysobacter sp. OAE881 ABIE51_RS00215 pseudouridine synthase insig. 48 97
o Escherichia coli BL21 ECD_02636 tRNA(Ile1,Asp) pseudouridine(65) synthase insig. 46 97
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00940 tRNA pseudouridine synthase C insig. 46 97
o Escherichia coli BW25113 b2791 yqcB tRNA pseudouridine synthase (NCBI) insig. 46 97
o Klebsiella michiganensis M5al BWI76_RS22850 tRNA pseudouridine synthase TruC insig. 46 97
o Escherichia coli ECRC100 OKFHMN_20210 truC tRNA pseudouridine(65) synthase TruC insig. 46 97
o Escherichia coli ECRC101 MCAODC_10735 truC tRNA pseudouridine(65) synthase TruC insig. 46 97
o Escherichia coli ECRC102 NIAGMN_17980 truC tRNA pseudouridine(65) synthase TruC insig. 46 97
o Escherichia coli ECRC98 JDDGAC_23875 truC tRNA pseudouridine(65) synthase TruC insig. 46 97
o Escherichia coli ECRC99 KEDOAH_07920 truC tRNA pseudouridine(65) synthase TruC no data 46 97
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18680 pseudouridine synthase no data 48 97
o Escherichia coli Nissle 1917 ECOLIN_RS15550 tRNA pseudouridine(65) synthase TruC insig. 46 97
o Pantoea sp. MT58 IAI47_04065 tRNA pseudouridine(65) synthase TruC insig. 45 97
o Escherichia coli ECOR38 HEPCGN_19465 truC tRNA pseudouridine(65) synthase TruC insig. 46 97
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16905 tRNA pseudouridine(65) synthase TruC cofit 45 97
o Rahnella sp. WP5 EX31_RS13065 tRNA pseudouridine(65) synthase TruC insig. 45 97
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09310 pseudouridylate synthase insig. 45 95
o Escherichia fergusonii Becca EFB2_01126 tRNA pseudouridine synthase C insig. 46 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4846 tRNA pseudouridine synthase C (EC 4.2.1.70) strong 44 100
o Enterobacter asburiae PDN3 EX28DRAFT_2872 Pseudouridylate synthases, 23S RNA-specific no data 43 97
o Serratia liquefaciens MT49 IAI46_20290 tRNA pseudouridine(65) synthase TruC insig. 43 99
o Erwinia amylovora T8 OLJFJH_09220 tRNA pseudouridine(65) synthase TruC insig. 42 100
o Dickeya dianthicola 67-19 HGI48_RS05085 tRNA pseudouridine(65) synthase TruC insig. 44 99
o Dickeya dianthicola ME23 DZA65_RS05425 tRNA pseudouridine(65) synthase TruC insig. 44 99
o Dickeya dadantii 3937 DDA3937_RS05085 tRNA pseudouridine(65) synthase TruC insig. 43 100
o Enterobacter sp. TBS_079 MPMX20_03661 tRNA pseudouridine synthase C insig. 42 97
o Shewanella amazonensis SB2B Sama_1131 pseudouridylate synthase (RefSeq) insig. 42 97
o Shewanella loihica PV-4 Shew_2643 pseudouridylate synthase (RefSeq) insig. 42 97
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_17320 truC tRNA pseudouridine(65) synthase TruC cofit 42 99
o Erwinia tracheiphila SCR3 LU632_RS06295 truC tRNA pseudouridine(65) synthase TruC insig. 42 99
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06180 pseudouridylate synthase insig. 40 99
o Shewanella sp. ANA-3 Shewana3_2824 tRNA pseudouridine synthase C (RefSeq) insig. 41 98
o Marinobacter adhaerens HP15 HP15_1021 tRNA pseudouridine synthase C insig. 43 96
o Alteromonas macleodii MIT1002 MIT1002_00998 tRNA pseudouridine synthase C insig. 40 96
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3374 Pseudouridylate synthases, 23S RNA-specific insig. 42 97
o Acidovorax sp. GW101-3H11 Ac3H11_3112 tRNA pseudouridine synthase C (EC 4.2.1.70) insig. 40 91
  Dechlorosoma suillum PS Dsui_2437 pseudouridine synthase, RluA family strong 44 91
  Variovorax sp. SCN45 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) insig. 39 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS22215 RluA family pseudouridine synthase no data 38 90
  Burkholderia phytofirmans PsJN BPHYT_RS09135 ribosomal large subunit pseudouridine synthase D sig. 37 92
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00848 ribosomal large subunit pseudouridine synthase D (EC 5.4.99.-) insig. 37 90
  Paraburkholderia graminis OAS925 ABIE53_002062 23S rRNA pseudouridine1911/1915/1917 synthase strong 36 94
  Variovorax sp. OAS795 ABID97_RS08250 RluA family pseudouridine synthase strong 38 94
  Shewanella amazonensis SB2B Sama_2197 pseudouridylate synthase (RefSeq) insig. 37 89
  Rahnella sp. WP5 EX31_RS24400 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 37 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU1024 rluD/coaE ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase (TIGR) insig. 38 91
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08615 RluA family pseudouridine synthase strong 32 99
  Phocaeicola dorei CL03T12C01 ABI39_RS02845 RluA family pseudouridine synthase strong 32 99
  Erwinia tracheiphila SCR3 LU632_RS14855 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 35 98
  Xanthobacter sp. DMC5 GFF2508 Ribosomal large subunit pseudouridine synthase D insig. 36 91
  Paraburkholderia graminis OAS925 ABIE53_003058 23S rRNA pseudouridine955/2504/2580 synthase sig. 34 95
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_00715 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 35 98
  Rhizobium sp. OAE497 ABIE40_RS14790 RluA family pseudouridine synthase sig. 35 94
  Burkholderia phytofirmans PsJN BPHYT_RS14480 ribosomal large subunit pseudouridine synthase C sig. 33 96
  Shewanella loihica PV-4 Shew_1594 RluA family pseudouridine synthase (RefSeq) sig. 34 95
  Acidovorax sp. GW101-3H11 Ac3H11_1590 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 39 91
  Caulobacter crescentus NA1000 CCNA_01343 ribosomal large subunit pseudouridine synthase C sig. 34 94
  Caulobacter crescentus NA1000 Δfur CCNA_01343 ribosomal large subunit pseudouridine synthase C cofit 34 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04340 23S rRNA pseudouridine955/2504/2580 synthase insig. 34 95
  Phaeobacter inhibens DSM 17395 PGA1_c01950 ribosomal large subunit pseudouridine synthase C no data 32 97
  Erwinia amylovora T8 OLJFJH_15565 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 36 94
  Sphingobium sp. HT1-2 GFF4062 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 32 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF121 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) cofit 36 91
  Dechlorosoma suillum PS Dsui_3205 pseudouridine synthase, RluA family insig. 36 91
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07880 RluA family pseudouridine synthase insig. 33 93
  Serratia liquefaciens MT49 IAI46_09755 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 36 94
  Escherichia coli ECRC100 OKFHMN_03615 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 35 95
  Escherichia coli ECRC101 MCAODC_22975 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 35 95
  Escherichia coli ECRC102 NIAGMN_24215 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 35 95
  Escherichia coli ECRC98 JDDGAC_07275 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 35 95
  Escherichia coli ECRC99 KEDOAH_24140 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC no data 35 95
  Kangiella aquimarina DSM 16071 B158DRAFT_1770 ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) insig. 34 94
  Escherichia coli BL21 ECD_01082 23S rRNA pseudouridine(955,2504,2580) synthase strong 35 95
  Escherichia fergusonii Becca EFB2_02889 Ribosomal large subunit pseudouridine synthase C insig. 35 95
  Escherichia coli ECOR27 NOLOHH_21145 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 35 95
  Escherichia coli ECOR38 HEPCGN_23865 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 35 95
  Escherichia coli ECRC62 BNILDI_19305 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 35 95
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02580 Ribosomal large subunit pseudouridine synthase C strong 35 95
  Escherichia coli Nissle 1917 ECOLIN_RS06280 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 35 95
  Escherichia coli BW25113 b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) strong 35 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS13315 RluA family pseudouridine synthase strong 35 96
  Bacteroides stercoris CC31F HMPREF1181_RS03250 RluA family pseudouridine synthase strong 32 99
  Ralstonia sp. UNC404CL21Col ABZR87_RS10090 RluA family pseudouridine synthase sig. 35 96
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10060 RluA family pseudouridine synthase insig. 34 90
o Magnetospirillum magneticum AMB-1 AMB_RS17255 RNA pseudouridine synthase insig. 34 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3366 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) cofit 35 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS04500 RluA family pseudouridine synthase cofit 34 96
  Ralstonia solanacearum PSI07 RPSI07_RS19085 RluA family pseudouridine synthase strong 34 99