| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Escherichia coli ECOR38 | HEPCGN_04445 | xerD | integrase | insig. | 100 | 100 |
| o | Escherichia coli ECRC100 | OKFHMN_26010 | xerD | integrase | insig. | 100 | 100 |
| o | Escherichia coli ECRC101 | MCAODC_19380 | xerD | integrase | insig. | 100 | 100 |
| o | Escherichia coli ECRC99 | KEDOAH_02080 | xerD | integrase | no data | 100 | 100 |
| o | Escherichia coli ECRC98 | JDDGAC_00600 | xerD | integrase | insig. | 100 | 100 |
| o | Escherichia coli ECRC102 | NIAGMN_02040 | xerD | integrase | insig. | 99 | 100 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS07965 | | tyrosine-type recombinase/integrase | insig. | 64 | 97 |
| o | Pantoea sp. MT58 | IAI47_02995 | | tyrosine-type recombinase/integrase | insig. | 55 | 94 |
| | Erwinia tracheiphila SCR3 | LU632_RS03480 | | tyrosine-type recombinase/integrase | insig. | 58 | 93 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_02490 | | integrase | insig. | 58 | 94 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_05430 | xerD | integrase | cofit | 57 | 93 |
| o | Dickeya dianthicola 67-19 | HGI48_RS02890 | | tyrosine-type recombinase/integrase | insig. | 57 | 95 |
| | Dickeya dadantii 3937 | DDA3937_RS04115 | | site-specific integrase | insig. | 57 | 93 |
| | Dickeya dianthicola ME23 | DZA65_RS04005 | | site-specific integrase | insig. | 57 | 93 |
| o | Enterobacter sp. TBS_079 | MPMX20_03950 | | Tyrosine recombinase XerC | strong | 54 | 95 |
| o | Escherichia coli ECRC62 | BNILDI_11500 | xerD | integrase | cofit | 57 | 94 |
| | Pectobacterium carotovorum WPP14 | HER17_RS05350 | | site-specific integrase | insig. | 55 | 93 |
| | Pectobacterium carotovorum WPP14 | HER17_RS18625 | | tyrosine-type recombinase/integrase | cofit | 52 | 98 |
| | Klebsiella michiganensis M5al | BWI76_RS09185 | | integrase | insig. | 52 | 93 |
| o | Escherichia coli BL21 | ECD_00815 | | integrase for prophage | insig. | 53 | 93 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02862 | | Tyrosine recombinase XerD | insig. | 53 | 93 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_17435 | | integrase | insig. | 53 | 93 |
| | Escherichia fergusonii Becca | EFB2_03259 | | Tyrosine recombinase XerC | insig. | 53 | 93 |
| o | Pseudomonas segetis P6 | ACVTMO_RS21410 | | phage integrase | insig. | 49 | 93 |
| | Pseudomonas segetis P6 | ACVTMO_RS04260 | | phage integrase | insig. | 47 | 95 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS01250 | | integrase | insig. | 48 | 93 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_04951 | | Putative integrase | insig. | 47 | 93 |
| o | Pseudomonas sp. S08-1 | OH686_07985 | | Phage integrase | cofit | 48 | 94 |
| | Pseudomonas segetis P6 | ACVTMO_RS06550 | | phage integrase | insig. | 46 | 93 |
| o | Pseudomonas stutzeri RCH2 | Psest_2903 | | Site-specific recombinase XerD | insig. | 45 | 94 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_05595 | | integrase | insig. | 46 | 94 |
| | Pseudomonas stutzeri RCH2 | Psest_4123 | | Site-specific recombinase XerD | sig. | 45 | 93 |
| o | Marinobacter adhaerens HP15 | HP15_3093 | | phage integrase family protein | insig. | 43 | 93 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_03615 | | Putative integrase | sig. | 44 | 84 |
| o | Rahnella sp. WP5 | EX31_RS18465 | | tyrosine-type recombinase/integrase | insig. | 40 | 94 |
| | Escherichia coli ECRC98 | JDDGAC_09320 | | integrase | strong | 40 | 93 |
| o | Vibrio cholerae E7946 ATCC 55056 | CSW01_11165 | | integrase | insig. | 41 | 98 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_25970 | | Tyr recombinase domain-containing protein | cofit | 41 | 93 |
| | Pseudomonas stutzeri RCH2 | Psest_3052 | | Site-specific recombinase XerD | insig. | 40 | 93 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_04413 | | Bacteriophage integrase | cofit | 39 | 93 |
| | Escherichia coli ECRC101 | MCAODC_20995 | int | Integrase | insig. | 41 | 93 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_04468 | | Bacteriophage integrase | insig. | 39 | 93 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_01645 | | Integrase | no data | 38 | 93 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_27510 | | Integrase | no data | 38 | 93 |
| | Erwinia tracheiphila SCR3 | LU632_RS01475 | | tyrosine-type recombinase/integrase | sig. | 38 | 93 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS21520 | | phage integrase | cofit | 40 | 93 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0878 | | Site-specific recombinase XerD | insig. | 40 | 93 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_04369 | | tyrosine-type recombinase/integrase | insig. | 46 | 70 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_01510 | | Integrase | cofit | 38 | 77 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_23350 | | integrase | no data | 45 | 56 |
| | Erwinia tracheiphila SCR3 | LU632_RS21160 | | tyrosine-type recombinase/integrase | no data | 46 | 56 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_29580 | | putative bacteriophage integrase | no data | 53 | 38 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_25455 | | Site-specific recombinase phage integrase family protein | cofit | 53 | 37 |
| | Escherichia coli ECOR38 | HEPCGN_26815 | xerD | integrase | insig. | 73 | 23 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS00045 | | site-specific integrase | insig. | 33 | 76 |
| | Sinorhizobium meliloti 1021 | SMc02397 | | integrase | insig. | 31 | 91 |
| | Lysobacter sp. OAE881 | ABIE51_RS07380 | | site-specific integrase | strong | 27 | 77 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS18470 | | site-specific integrase | insig. | 29 | 77 |
| | Agrobacterium fabrum C58 | Atu1194 | | phage-related integrase | insig. | 25 | 91 |
| | Shewanella oneidensis MR-1 | SO_A0045 | | site-specific recombinase, phage integrase family (NCBI) | insig. | 32 | 70 |
| | Dinoroseobacter shibae DFL-12 | Dshi_1611 | | integrase family protein (RefSeq) | strong | 29 | 72 |
| | Caulobacter crescentus NA1000 | CCNA_03101 | | site-specific tyrosine recombinase XerD | strong | 28 | 71 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03101 | | site-specific tyrosine recombinase XerD | cofit | 28 | 71 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3213 | | integrase family protein (RefSeq) | insig. | 29 | 68 |
| | Alteromonas macleodii MIT1002 | MIT1002_00157 | | Tyrosine recombinase XerC | insig. | 29 | 58 |
| | Sphingobium sp. HT1-2 | GFF3220 | | Phage (Mu-like) virion morphogenesis protein | cofit | 26 | 90 |
| | Azospirillum brasilense Sp245 | AZOBR_RS03240 | | recombinase XerD | insig. | 28 | 74 |
| | Dechlorosoma suillum PS | Dsui_1127 | | site-specific recombinase XerD | cofit | 25 | 90 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS20435 | | DUF4102 domain-containing protein | insig. | 27 | 93 |
| | Xanthobacter sp. DMC5 | GFF2054 | | Tyrosine recombinase XerC | no data | 34 | 41 |
| | Rhodopseudomonas palustris CGA009 | TX73_000945 | | tyrosine recombinase XerC | sig. | 32 | 41 |
| | Bifidobacterium breve UCC2003 | BBR_RS16755 | | site-specific tyrosine recombinase XerD | strong | 30 | 54 |
| | Escherichia coli BW25113 | b0537 | intD | DLP12 prophage; predicted integrase (NCBI) | sig. | 28 | 68 |
| | Sphingobium sp. HT1-2 | GFF2416 | | Site-specific tyrosine recombinase XerD | strong | 28 | 70 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS00515 | | site-specific tyrosine recombinase XerD | strong | 28 | 69 |
| | Escherichia coli ECOR27 | NOLOHH_00750 | intD | Prophage integrase IntD | insig. | 28 | 68 |
| | Azospirillum brasilense Sp245 | AZOBR_RS30360 | | integrase | insig. | 27 | 76 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS15025 | | tyrosine recombinase XerC | strong | 29 | 77 |
| | Ralstonia solanacearum UW163 | UW163_RS23220 | | recombinase XerC | insig. | 32 | 53 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_2764 | | Site-specific recombinase XerD | sig. | 29 | 45 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3595 | | Site-specific recombinase XerD | sig. | 29 | 72 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS04775 | | integrase | insig. | 28 | 58 |
| | Ralstonia solanacearum GMI1000 | RS_RS17610 | | recombinase XerC | insig. | 32 | 53 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_14800 | | hypothetical protein | insig. | 29 | 61 |
| | Escherichia coli BL21 | ECD_00486 | | DLP12 prophage; putative phage integrase | insig. | 27 | 68 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS08300 | | tyrosine recombinase XerC | strong | 29 | 76 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c00260 | | putative phage integrase, catalytic core | insig. | 27 | 95 |
| | Rhodospirillum rubrum S1H | Rru_A1220 | | Phage integrase (NCBI) | no data | 26 | 68 |
| | Azospirillum sp. SherDot2 | MPMX19_02110 | | Tyrosine recombinase XerC | no data | 29 | 38 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS12210 | | tyrosine recombinase XerC | insig. | 28 | 41 |
| | Escherichia coli ECRC100 | OKFHMN_09660 | xerD | integrase | insig. | 26 | 95 |
| | Escherichia coli ECRC98 | JDDGAC_13285 | xerD | integrase | insig. | 26 | 95 |
| | Pseudomonas sp. DMC3 | GFF370 | | Tyrosine recombinase XerC | cofit | 28 | 75 |
| | Escherichia coli ECRC102 | NIAGMN_07520 | xerD | integrase | insig. | 29 | 71 |
| | Dinoroseobacter shibae DFL-12 | Dshi_5002 | xerC | hypothetical protein (NCBI) | no data | 27 | 43 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c14060 | | tyrosine recombinase XerD | strong | 26 | 79 |
| | Escherichia coli ECRC101 | MCAODC_00180 | xerD | Site-specific recombinase XerD | insig. | 29 | 71 |
| | Bosea sp. OAE506 | ABIE41_RS07870 | | tyrosine recombinase XerC | strong | 29 | 46 |
| | Pseudomonas putida KT2440 | PP_2297 | | putative integrative genetic element Ppu40, integrase | insig. | 29 | 68 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_01050 | | site-specific recombinase, phage integrase family/ribosomal subunit interface protein | insig. | 28 | 66 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2197 | | site-specific recombinase, phage integrase family (TIGR) | insig. | 28 | 66 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_12725 | | recombinase XerC | strong | 27 | 73 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_15325 | xerC | tyrosine recombinase XerC | insig. | 27 | 76 |
| | Pseudomonas orientalis W4I3 | QF045_RS01960 | | tyrosine recombinase XerC | strong | 30 | 44 |
| | Xanthobacter sp. DMC5 | GFF3081 | | Tyrosine recombinase XerD | no data | 30 | 48 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS02315 | | tyrosine recombinase XerC | insig. | 29 | 76 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0827 | | Site-specific recombinase XerD | insig. | 27 | 69 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS02095 | | site-specific integrase | insig. | 31 | 76 |
| | Azospirillum sp. SherDot2 | MPMX19_02643 | | Tyrosine recombinase XerD | no data | 31 | 43 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_05657 | | Tyrosine recombinase XerC | cofit | 30 | 44 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_842 | | Tyrosine recombinase XerC | sig. | 29 | 46 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3700 | | integrase family protein (RefSeq) | insig. | 28 | 64 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS08535 | | tyrosine recombinase XerC | insig. | 27 | 76 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c05760 | | putative tyrosine recombinase XerC | strong | 29 | 45 |
| | Ralstonia solanacearum UW163 | UW163_RS11435 | | site-specific integrase | insig. | 28 | 88 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS19640 | | hypothetical protein | insig. | 28 | 91 |
| | Pseudomonas sp. RS175 | PFR28_04378 | | Tyrosine recombinase XerC | strong | 27 | 73 |
| | Azospirillum brasilense Sp245 | AZOBR_RS03965 | | tyrosine recombinase XerC | no data | 27 | 66 |
| | Pseudomonas sp. S08-1 | OH686_13785 | | tyrosine recombinase XerC | insig. | 31 | 42 |
| | Sphingobium sp. HT1-2 | GFF251 | | Site-specific tyrosine recombinase XerC | cofit | 30 | 41 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0185 | | tyrosine recombinase XerC subunit | sig. | 29 | 46 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0185 | | tyrosine recombinase XerC subunit | sig. | 29 | 46 |
| | Dinoroseobacter shibae DFL-12 | Dshi_0395 | | integrase family protein (RefSeq) | insig. | 28 | 75 |
| | Pseudomonas sp. SVBP6 | COO64_RS01270 | xerC | tyrosine recombinase XerC | sig. | 26 | 77 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_09050 | | recombinase XerC | sig. | 26 | 90 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS29280 | | tyrosine recombinase XerC | sig. | 30 | 44 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS29280 | | tyrosine recombinase XerC | strong | 30 | 44 |
| | Pseudomonas simiae WCS417 | PS417_27595 | | recombinase XerC | sig. | 30 | 44 |
| | Pseudomonas stutzeri RCH2 | Psest_3767 | | tyrosine recombinase XerC | strong | 33 | 42 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS19890 | | integrase catalytic domain-containing protein | insig. | 27 | 48 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS23690 | | tyrosine recombinase XerC | sig. | 26 | 81 |
| | Rhizobium sp. OAE497 | ABIE40_RS17685 | | site-specific tyrosine recombinase XerD | sig. | 32 | 43 |
| | Rhodopseudomonas palustris CGA009 | TX73_002625 | | site-specific tyrosine recombinase XerD | sig. | 31 | 60 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2171 | | Tyrosine recombinase XerC | insig. | 30 | 44 |
| | Pseudomonas segetis P6 | ACVTMO_RS22525 | xerC | tyrosine recombinase XerC | no data | 27 | 89 |
| | Bosea sp. OAE506 | ABIE41_RS06100 | | site-specific tyrosine recombinase XerD | strong | 27 | 63 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4416 | | Tyrosine recombinase XerC | strong | 27 | 73 |
| | Pseudomonas protegens RBAN4 | FABNJH_30340 | xerC | tyrosine recombinase XerC | insig. | 30 | 46 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01966 | | Site-specific recombinase XerD | insig. | 29 | 75 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS13965 | | site-specific integrase | insig. | 27 | 69 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3270 | | Site-specific recombinase XerD | insig. | 28 | 54 |
| | Sinorhizobium meliloti 1021 | SMc00691 | | site-specific tyrosine recombinase XerD | sig. | 32 | 43 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS19880 | | site-specific tyrosine recombinase XerD | cofit | 28 | 61 |
| | Agrobacterium fabrum C58 | Atu2628 | | site-specific recombinase | no data | 28 | 42 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_15045 | | integrase | insig. | 27 | 68 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.847.1 | | Site-specific tyrosine recombinase | no data | 27 | 69 |
| | Lysobacter sp. OAE881 | ABIE51_RS03035 | | tyrosine recombinase XerC | strong | 25 | 77 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS09900 | | site-specific integrase | insig. | 29 | 60 |
| | Rahnella sp. WP5 | EX31_RS15165 | | tyrosine recombinase XerC | strong | 28 | 72 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS12160 | | site-specific tyrosine recombinase XerD | insig. | 31 | 49 |
| | Escherichia coli BL21 | ECD_02726 | | site-specific tyrosine recombinase | strong | 28 | 49 |
| | Escherichia fergusonii Becca | EFB2_01007 | | Tyrosine recombinase XerD | strong | 28 | 49 |
| | Escherichia coli ECOR27 | NOLOHH_11495 | xerD | site-specific tyrosine recombinase XerD | strong | 28 | 49 |
| | Escherichia coli ECOR38 | HEPCGN_18860 | xerD | site-specific tyrosine recombinase XerD | strong | 28 | 49 |
| | Escherichia coli ECRC100 | OKFHMN_19570 | xerD | site-specific tyrosine recombinase XerD | no data | 28 | 49 |
| | Escherichia coli ECRC101 | MCAODC_10090 | xerD | site-specific tyrosine recombinase XerD | no data | 28 | 49 |
| | Escherichia coli ECRC102 | NIAGMN_17335 | xerD | site-specific tyrosine recombinase XerD | no data | 28 | 49 |
| | Escherichia coli ECRC62 | BNILDI_10025 | xerD | site-specific tyrosine recombinase XerD | insig. | 28 | 49 |
| | Escherichia coli ECRC98 | JDDGAC_23210 | xerD | site-specific tyrosine recombinase XerD | no data | 28 | 49 |
| | Escherichia coli ECRC99 | KEDOAH_08570 | xerD | site-specific tyrosine recombinase XerD | no data | 28 | 49 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00821 | | Tyrosine recombinase XerD | sig. | 28 | 49 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS16125 | | site-specific tyrosine recombinase XerD | strong | 28 | 49 |
| | Escherichia coli BW25113 | b2894 | xerD | site-specific tyrosine recombinase XerD (NCBI) | strong | 28 | 49 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2991 | | Tyrosine recombinase XerD | cofit | 28 | 49 |
| | Mycobacterium tuberculosis H37Rv | Rv1701 | | Probable integrase/recombinase | sig. | 28 | 49 |
| | Caulobacter crescentus NA1000 | CCNA_00349 | | integrase/recombinase, XerC-CodV family | strong | 27 | 43 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_00349 | | integrase/recombinase, XerC-CodV family | cofit | 27 | 43 |
| | Ralstonia solanacearum GMI1000 | RS_RS07820 | | site-specific integrase | insig. | 27 | 73 |
| | Ralstonia solanacearum GMI1000 | RS_RS12755 | | tyrosine recombinase XerD | no data | 31 | 49 |
| | Shewanella sp. ANA-3 | Shewana3_3331 | | tyrosine recombinase XerD (RefSeq) | strong | 30 | 51 |
| | Methylophilus sp. DMC18 | GFF2342 | | Tyrosine recombinase XerD | insig. | 27 | 74 |
| | Pantoea sp. MT58 | IAI47_03820 | | site-specific tyrosine recombinase XerD | strong | 30 | 49 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS04050 | xerD | site-specific tyrosine recombinase XerD | cofit | 30 | 49 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2945 | | tyrosine recombinase XerD | insig. | 30 | 49 |
| | Agrobacterium fabrum C58 | Atu3629 | | site-specific tyrosine recombinase XerD | no data | 30 | 63 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS05140 | | site-specific tyrosine recombinase XerD | insig. | 29 | 65 |
| | Ralstonia solanacearum UW163 | UW163_RS08485 | | site-specific tyrosine recombinase XerD | insig. | 29 | 65 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS05065 | | tyrosine recombinase XerC | strong | 25 | 81 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS42900 | | site-specific integrase | no data | 25 | 73 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS16135 | | site-specific integrase | insig. | 32 | 41 |
| | Enterobacter sp. TBS_079 | MPMX20_03753 | | Tyrosine recombinase XerD | strong | 30 | 49 |
| | Ralstonia solanacearum GMI1000 | RS_RS00260 | | Tyrosine recombinase XerC 1 | insig. | 26 | 81 |
| | Shewanella oneidensis MR-1 | SO0950 | xerD | integrase/recombinase XerD (NCBI ptt file) | strong | 30 | 51 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS01870 | | site-specific integrase | insig. | 30 | 46 |
| | Shewanella loihica PV-4 | Shew_0770 | | tyrosine recombinase XerD (RefSeq) | strong | 31 | 42 |
| | Sinorhizobium meliloti 1021 | SMc02489 | | site-specific tyrosine recombinase XerC | no data | 28 | 42 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02123 | | tyrosine recombinase XerD | strong | 27 | 53 |
| | Cellulophaga baltica 18 | M666_RS11310 | | site-specific tyrosine recombinase XerD | sig. | 27 | 81 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS04165 | | site-specific tyrosine recombinase XerD | no data | 34 | 36 |
| | Dickeya dianthicola 67-19 | HGI48_RS03440 | | site-specific tyrosine recombinase XerD | insig. | 32 | 40 |
| | Dickeya dianthicola ME23 | DZA65_RS03485 | | site-specific tyrosine recombinase XerD | no data | 32 | 40 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_05607 | xerC | tyrosine recombinase XerC | sig. | 31 | 43 |
| | Marinobacter adhaerens HP15 | HP15_762 | | site-specific tyrosine recombinase XerD | insig. | 27 | 80 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2742 | | integrase, site-specific recombinase (NCBI ptt file) | insig. | 26 | 65 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_05531 | xerC | tyrosine recombinase XerC | strong | 31 | 43 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_27050 | | tyrosine recombinase XerC | strong | 31 | 43 |
| | Dickeya dadantii 3937 | DDA3937_RS03300 | | site-specific tyrosine recombinase XerD | insig. | 30 | 49 |
| | Shewanella oneidensis MR-1 | SOA0044 | | site-specific recombinase, phage integrase family (NCBI ptt file) | insig. | 27 | 60 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS09520 | | site-specific tyrosine recombinase XerD | sig. | 27 | 70 |
| | Pseudomonas sp. BP01 | JOY50_RS22610 | xerC | tyrosine recombinase XerC | insig. | 25 | 69 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS21475 | | recombinase XerC | insig. | 24 | 55 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS15950 | | tyrosine recombinase XerD | sig. | 30 | 56 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04126 | | integrase/recombinase XerD | no data | 30 | 56 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_04300 | | site-specific tyrosine recombinase XerD | sig. | 29 | 49 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_00783 | xerD | site-specific tyrosine recombinase XerD | no data | 29 | 49 |
| | Azospirillum brasilense Sp245 | AZOBR_RS24420 | | integrase | insig. | 28 | 66 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS09675 | | tyrosine recombinase XerC | sig. | 24 | 96 |
| | Ralstonia solanacearum UW163 | UW163_RS03905 | | tyrosine recombinase XerC | insig. | 24 | 96 |
| | Serratia liquefaciens MT49 | IAI46_20730 | | site-specific tyrosine recombinase XerD | insig. | 31 | 42 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS10220 | | site-specific tyrosine recombinase XerD | insig. | 31 | 54 |
| | Klebsiella michiganensis M5al | BWI76_RS23815 | | site-specific tyrosine recombinase XerD | no data | 29 | 49 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS04265 | | tyrosine recombinase XerD | insig. | 29 | 56 |
| | Alteromonas macleodii MIT1002 | MIT1002_00786 | | Tyrosine recombinase XerD | insig. | 27 | 72 |
| | Methanococcus maripaludis JJ | MMJJ_RS03475 | | tyrosine-type recombinase/integrase | cofit | 27 | 59 |
| | Dechlorosoma suillum PS | Dsui_0651 | | tyrosine recombinase XerC | insig. | 26 | 74 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS02835 | | integrase | strong | 25 | 66 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS02755 | | site-specific tyrosine recombinase XerD | no data | 29 | 57 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_01229 | xerD | site-specific tyrosine recombinase XerD | insig. | 33 | 42 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_19085 | | site-specific tyrosine recombinase XerD | no data | 33 | 42 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_01247 | xerD | site-specific tyrosine recombinase XerD | insig. | 33 | 42 |
| | Mycobacterium tuberculosis H37Rv | Rv2894c | | Probable integrase/recombinase XerC | no data | 32 | 46 |
| | Pectobacterium carotovorum WPP14 | HER17_RS17890 | | site-specific tyrosine recombinase XerD | strong | 30 | 42 |
| | Erwinia amylovora T8 | OLJFJH_08835 | | site-specific tyrosine recombinase XerD | strong | 29 | 49 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS12115 | | integrase | insig. | 29 | 62 |
| | Ralstonia solanacearum UW163 | UW163_RS01495 | | integrase | insig. | 29 | 62 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS39850 | | site-specific integrase | no data | 25 | 65 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS42300 | | site-specific integrase | no data | 25 | 65 |
| | Klebsiella michiganensis M5al | BWI76_RS15885 | | putative phage integrase | insig. | 25 | 74 |
| | Bosea sp. OAE506 | ABIE41_RS19630 | | tyrosine-type recombinase/integrase | insig. | 31 | 46 |
| | Mycobacterium tuberculosis H37Rv | Rv2646 | | Probable integrase | insig. | 29 | 43 |
| | Pseudomonas sp. BP01 | JOY50_RS11700 | xerD | site-specific tyrosine recombinase XerD | insig. | 29 | 51 |
| | Pseudomonas putida KT2440 | PP_1468 | | Tyrosine recombinase XerD | strong | 29 | 51 |
| | Serratia liquefaciens MT49 | IAI46_00725 | | tyrosine recombinase XerC | insig. | 28 | 58 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_4480 | | tyrosine recombinase XerC | no data | 27 | 73 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS35970 | | DNA recombinase | insig. | 27 | 88 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS17800 | | tyrosine-type recombinase/integrase | insig. | 27 | 66 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF239 | | Tyrosine recombinase XerC | no data | 27 | 73 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS08890 | | site-specific integrase | insig. | 26 | 60 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS09680 | | site-specific tyrosine recombinase XerD | strong | 29 | 53 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS42770 | | site-specific integrase | insig. | 24 | 73 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4739 | | transposase (NCBI ptt file) | sig. | 27 | 57 |
| | Cellulophaga baltica 18 | M666_RS09150 | | tyrosine-type recombinase/integrase | sig. | 26 | 68 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS00625 | | tyrosine recombinase XerC | cofit | 24 | 64 |
| | Rahnella sp. WP5 | EX31_RS13480 | | site-specific tyrosine recombinase XerD | strong | 32 | 40 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS03345 | | recombinase XerD | sig. | 32 | 43 |
| | Dechlorosoma suillum PS | Dsui_2597 | | tyrosine recombinase XerD | cofit | 30 | 50 |
| | Paraburkholderia graminis OAS925 | ABIE53_003361 | | integrase/recombinase XerD | strong | 29 | 56 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS00045 | | site-specific integrase | no data | 29 | 46 |
| | Lysobacter sp. OAE881 | ABIE51_RS12320 | | site-specific integrase | insig. | 29 | 68 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09695 | | integrase | strong | 27 | 54 |