Homologs of GFF787 from Sphingobium sp. HT1-2

Lysine decarboxylase family
SEED: putative lysine decarboxylase

190 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF787 Lysine decarboxylase family cofit 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2416 TIGR00730 family protein cofit 76 96
o Cupriavidus basilensis FW507-4G11 RR42_RS05385 LOG family protein insig. 54 92
o Azospirillum brasilense Sp245 AZOBR_RS14105 LOG family protein insig. 51 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04542 hypothetical protein insig. 52 94
o Ralstonia sp. UNC404CL21Col ABZR87_RS15005 TIGR00730 family Rossman fold protein insig. 51 96
o Acinetobacter radioresistens SK82 MPMX26_02735 Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase insig. 51 94
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3589 Lysine decarboxylase family insig. 51 94
o Pseudomonas sp. SVBP6 COO64_RS18015 TIGR00730 family Rossman fold protein insig. 52 93
o Burkholderia phytofirmans PsJN BPHYT_RS06500 LOG family protein insig. 51 94
o Paraburkholderia graminis OAS925 ABIE53_001565 uncharacterized protein (TIGR00730 family) sig. 50 94
o Klebsiella pneumoniae MKP103 KDGMDA_23505 TIGR00730 family Rossman fold protein insig. 50 94
o Klebsiella pneumoniae MRSN742743 KFA93_RS13825 TIGR00730 family Rossman fold protein insig. 50 94
o Pseudomonas sp. RS175 PFR28_05145 'Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase' transl_table=11 insig. 50 94
o Pseudomonas aeruginosa PUPa3 DQ20_RS51660 TIGR00730 family Rossman fold protein insig. 51 94
o Pseudomonas aeruginosa MRSN321 DY961_RS10395 TIGR00730 family Rossman fold protein insig. 50 94
o Pseudomonas aeruginosa PA14 IKLFDK_28935 Cytokinin riboside 5'-monophosphate phosphoribohydrolase insig. 51 94
o Pseudomonas segetis P6 ACVTMO_RS06140 LOG family protein insig. 50 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_132 Lysine decarboxylase family insig. 50 94
o Ralstonia solanacearum PSI07 RPSI07_RS14205 TIGR00730 family Rossman fold protein insig. 50 94
o Pseudomonas putida KT2440 PP_4871 putative lysine decarboxylase family protein sig. 49 93
o Pseudomonas sp. BP01 JOY50_RS17370 TIGR00730 family Rossman fold protein insig. 50 91
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS03100 TIGR00730 family Rossman fold protein insig. 52 90
o Ralstonia solanacearum UW163 UW163_RS10625 TIGR00730 family Rossman fold protein insig. 52 90
o Bosea sp. OAE506 ABIE41_RS21595 TIGR00730 family Rossman fold protein insig. 52 94
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1389 Lysine decarboxylase family insig. 50 94
o Pseudomonas fluorescens FW300-N2E3 AO353_13300 LOG family protein cofit 50 94
o Pseudomonas fluorescens FW300-N2C3 AO356_08535 LOG family protein insig. 49 94
o Dechlorosoma suillum PS Dsui_0979 TIGR00730 family protein sig. 48 96
o Pseudomonas stutzeri RCH2 Psest_3243 TIGR00730 family protein sig. 48 94
o Serratia liquefaciens MT49 IAI46_14285 TIGR00730 family Rossman fold protein cofit 50 93
o Herbaspirillum seropedicae SmR1 HSERO_RS16435 LOG family protein insig. 44 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS24290 TIGR00730 family Rossman fold protein insig. 49 94
o Pseudomonas sp. S08-1 OH686_16655 Lysine decarboxylase family insig. 48 94
o Pseudomonas sp. DMC3 GFF3244 Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase insig. 48 95
o Ralstonia solanacearum GMI1000 RS_RS10470 TIGR00730 family Rossman fold protein insig. 49 94
o Acinetobacter baumannii LAC-4 RR41_RS02060 TIGR00730 family Rossman fold protein insig. 48 93
o Lysobacter sp. OAE881 ABIE51_RS08970 TIGR00730 family Rossman fold protein insig. 47 99
o Marinobacter adhaerens HP15 HP15_3835 conserved hypothetical protein insig. 50 92
o Rhodanobacter sp. FW510-T8 OKGIIK_05925 TIGR00730 family Rossman fold protein insig. 51 92
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS05935 TIGR00730 family Rossman fold protein insig. 51 92
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15135 TIGR00730 family Rossman fold protein insig. 46 93
o Acidovorax sp. GW101-3H11 Ac3H11_519 Lysine decarboxylase family insig. 50 90
o Rhodanobacter denitrificans MT42 LRK55_RS00740 TIGR00730 family Rossman fold protein insig. 50 92
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS00965 TIGR00730 family Rossman fold protein insig. 50 92
o Magnetospirillum magneticum AMB-1 AMB_RS14390 TIGR00730 family Rossman fold protein no data 49 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4273 Lysine decarboxylase family cofit 57 79
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0909 TIGR00730 family protein insig. 45 94
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3415.1 Lysine decarboxylase family insig. 48 94
o Dickeya dadantii 3937 DDA3937_RS17825 TIGR00730 family Rossman fold protein insig. 45 94
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS09145 TIGR00730 family Rossman fold protein insig. 49 92
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10320 TIGR00730 family Rossman fold protein insig. 43 96
o Variovorax sp. SCN45 GFF1152 Lysine decarboxylase family insig. 46 92
o Variovorax sp. OAS795 ABID97_RS14855 TIGR00730 family Rossman fold protein insig. 48 92
  Acinetobacter radioresistens SK82 MPMX26_00134 Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase insig. 45 90
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10665 Rossman fold protein, TIGR00730 family insig. 44 96
o Rhodopseudomonas palustris CGA009 TX73_010330 TIGR00730 family Rossman fold protein insig. 42 100
o Dickeya dianthicola 67-19 HGI48_RS17765 TIGR00730 family Rossman fold protein insig. 43 95
o Dickeya dianthicola ME23 DZA65_RS18910 TIGR00730 family Rossman fold protein insig. 43 95
  Azospirillum brasilense Sp245 AZOBR_RS10990 lysine decarboxylase insig. 50 81
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS06240 TIGR00730 family Rossman fold protein insig. 45 84
  Acinetobacter baumannii LAC-4 RR41_RS17955 TIGR00730 family Rossman fold protein insig. 43 89
o Phocaeicola dorei CL03T12C01 ABI39_RS05550 TIGR00730 family Rossman fold protein insig. 44 84
o Bacteroides thetaiotaomicron VPI-5482 BT3224 putative lysine decarboxylase (NCBI ptt file) strong 45 82
o Bacteroides ovatus ATCC 8483 BACOVA_02921 TIGR00730 family protein insig. 44 84
o Agrobacterium fabrum C58 Atu1066 hypothetical protein insig. 41 95
o Azospirillum sp. SherDot2 MPMX19_06138 Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase insig. 44 91
o Rhizobium sp. OAE497 ABIE40_RS06210 TIGR00730 family Rossman fold protein insig. 40 92
o Fusobacterium nucleatum SB010 HUW76_07415 TIGR00730 family Rossman fold protein strong 38 93
o Bacteroides stercoris CC31F HMPREF1181_RS01670 TIGR00730 family Rossman fold protein insig. 47 84
o Rhodospirillum rubrum S1H Rru_A0357 hypothetical protein (NCBI) cofit 43 90
o Xanthobacter sp. DMC5 GFF545 hypothetical protein insig. 46 91
o Desulfovibrio vulgaris Miyazaki F DvMF_1885 hypothetical protein (RefSeq) insig. 46 94
  Sinorhizobium meliloti 1021 SMc02544 hypothetical protein insig. 42 81
  Bosea sp. OAE506 ABIE41_RS01645 TIGR00730 family Rossman fold protein insig. 40 93
  Dinoroseobacter shibae DFL-12 Dshi_1767 hypothetical protein (RefSeq) insig. 42 80
o Castellaniella sp019104865 MT123 ABCV34_RS10940 TIGR00730 family Rossman fold protein insig. 40 92
o Mycobacterium tuberculosis H37Rv Rv1205 Conserved hypothetical protein strong 40 90
o Phaeobacter inhibens DSM 17395 PGA1_c19080 TIGR00730 family protein insig. 43 88
  Bacteroides ovatus ATCC 8483 BACOVA_00911 TIGR00730 family protein insig. 37 81
  Caulobacter crescentus NA1000 CCNA_01372 lysine decarboxylase family strong 42 83
  Caulobacter crescentus NA1000 Δfur CCNA_01372 lysine decarboxylase family cofit 42 83
  Bacteroides thetaiotaomicron VPI-5482 BT3307 lysine decarboxylase (NCBI ptt file) no data 35 82
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08515 TIGR00730 family Rossman fold protein cofit 43 80
  Phocaeicola dorei CL03T12C01 ABI39_RS05115 TIGR00730 family Rossman fold protein insig. 32 75
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11790 TIGR00730 family Rossman fold protein sig. 32 75
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10705 TIGR00730 family Rossman fold protein no data 35 63
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04970 Rossman fold protein, TIGR00730 family strong 35 63
  Desulfovibrio vulgaris Hildenborough JW710 DVU1529 decarboxylase family protein (TIGR) insig. 30 88
  Castellaniella sp019104865 MT123 ABCV34_RS02190 TIGR00730 family Rossman fold protein insig. 29 88
  Cellulophaga baltica 18 M666_RS15450 TIGR00730 family Rossman fold protein no data 28 91
  Methylophilus sp. DMC18 GFF1659 hypothetical protein cofit 28 94
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1206 TIGR00730 family protein strong 27 89
  Desulfovibrio vulgaris Miyazaki F DvMF_0170 hypothetical protein (RefSeq) insig. 31 80
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18115 Rossman fold protein, TIGR00730 family no data 32 62
  Paraburkholderia sabiae LMG 24235 QEN71_RS17880 TIGR00730 family Rossman fold protein strong 26 91
  Magnetospirillum magneticum AMB-1 AMB_RS06140 LOG family protein cofit 28 84
  Bifidobacterium breve UCC2003 BBR_RS14545 TIGR00730 family Rossman fold protein insig. 28 88
  Paraburkholderia graminis OAS925 ABIE53_004851 uncharacterized protein (TIGR00730 family) strong 25 93
  Burkholderia phytofirmans PsJN BPHYT_RS33615 decarboxylase insig. 25 93
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06023 hypothetical protein strong 25 93
  Dechlorosoma suillum PS Dsui_0458 TIGR00730 family protein strong 24 94
  Ralstonia sp. UNC404CL21Col ABZR87_RS15685 TIGR00730 family Rossman fold protein strong 26 93
  Herbaspirillum seropedicae SmR1 HSERO_RS02255 decarboxylase strong 27 73
  Pseudomonas sp. S08-1 OH686_18215 Decarboxylase family protein insig. 31 81
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3842 FIG01199081: hypothetical protein strong 28 78
  Castellaniella sp019104865 MT123 ABCV34_RS05995 TIGR00730 family Rossman fold protein insig. 27 84
  Ralstonia solanacearum PSI07 RPSI07_RS13475 TIGR00730 family Rossman fold protein cofit 26 93
  Dinoroseobacter shibae DFL-12 Dshi_0004 hypothetical protein (RefSeq) insig. 28 79
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05510 TIGR00730 family Rossman fold protein insig. 27 87
  Cupriavidus basilensis FW507-4G11 RR42_RS15055 hypothetical protein strong 25 96
  Phaeobacter inhibens DSM 17395 PGA1_c36280 TIGR00730 family protein insig. 27 70
  Pseudomonas segetis P6 ACVTMO_RS16490 LOG family protein insig. 29 84
  Caulobacter crescentus NA1000 CCNA_00853 3-isopropylmalate dehydrogenase strong 28 85
  Caulobacter crescentus NA1000 Δfur CCNA_00853 3-isopropylmalate dehydrogenase cofit 28 85
  Pseudomonas sp. BP01 JOY50_RS23790 LOG family protein insig. 29 89
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03755 TIGR00730 family Rossman fold protein cofit 26 94
  Ralstonia solanacearum UW163 UW163_RS09915 TIGR00730 family Rossman fold protein insig. 26 94
  Ralstonia solanacearum GMI1000 RS_RS11200 TIGR00730 family Rossman fold protein cofit 26 93
  Marinobacter adhaerens HP15 HP15_1322 conserved hypothetical protein insig. 29 72
  Pseudomonas putida KT2440 PP_1631 conserved protein of unknown function insig. 29 89
  Pseudomonas orientalis W4I3 QF045_RS08740 TIGR00730 family Rossman fold protein insig. 28 92
  Rhodanobacter denitrificans MT42 LRK55_RS13885 TIGR00730 family Rossman fold protein insig. 28 77
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14165 TIGR00730 family Rossman fold protein insig. 28 77
  Rahnella sp. WP5 EX31_RS13090 LOG family protein insig. 28 48
  Pseudomonas fluorescens FW300-N2C3 AO356_05660 cytochrome D ubiquinol oxidase subunit II insig. 29 84
  Acidovorax sp. GW101-3H11 Ac3H11_2594 FIG01199081: hypothetical protein strong 28 84
  Pseudomonas simiae WCS417 PS417_05825 cytochrome D ubiquinol oxidase subunit II sig. 28 92
  Variovorax sp. SCN45 GFF2862 FIG01199081: hypothetical protein insig. 32 73
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01336 hypothetical protein cofit 28 89
  Bosea sp. OAE506 ABIE41_RS22580 TIGR00730 family Rossman fold protein insig. 27 79
  Pseudomonas sp. SVBP6 COO64_RS19940 LOG family protein insig. 29 84
  Pseudomonas fluorescens SBW25 PFLU_RS05895 TIGR00730 family Rossman fold protein insig. 30 81
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05895 TIGR00730 family Rossman fold protein insig. 30 81
  Pseudomonas fluorescens FW300-N2E3 AO353_16815 cytochrome D ubiquinol oxidase subunit II sig. 29 79
  Enterobacter sp. TBS_079 MPMX20_03665 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase insig. 28 54
  Pseudomonas aeruginosa PUPa3 DQ20_RS42225 LOG family protein insig. 27 92
  Pseudomonas stutzeri RCH2 Psest_2870 TIGR00730 family protein sig. 27 88
  Enterobacter asburiae PDN3 EX28DRAFT_2877 Predicted Rossmann fold nucleotide-binding protein strong 28 48
  Pseudomonas sp. RS175 PFR28_00474 hypothetical protein insig. 29 84
  Ralstonia solanacearum PSI07 RPSI07_RS15425 TIGR00725 family protein no data 29 69
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS14445 TIGR00730 family Rossman fold protein insig. 33 55
  Alteromonas macleodii MIT1002 MIT1002_00986 LOG family protein YgdH insig. 29 48
  Pseudomonas sp. DMC3 GFF2113 hypothetical protein cofit 34 47
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2991 decarboxylase insig. 29 84
  Escherichia coli BL21 ECD_02640 UPF0717 family protein insig. 27 48
  Escherichia fergusonii Becca EFB2_01122 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase insig. 27 48
  Escherichia coli ECOR27 NOLOHH_12065 ppnN nucleotide 5'-monophosphate nucleosidase sig. 27 48
  Escherichia coli ECOR38 HEPCGN_19440 ppnN nucleotide 5'-monophosphate nucleosidase insig. 27 48
  Escherichia coli ECRC100 OKFHMN_20185 ppnN nucleotide 5'-monophosphate nucleosidase cofit 27 48
  Escherichia coli ECRC101 MCAODC_10710 ppnN nucleotide 5'-monophosphate nucleosidase insig. 27 48
  Escherichia coli ECRC102 NIAGMN_17955 ppnN nucleotide 5'-monophosphate nucleosidase insig. 27 48
  Escherichia coli ECRC62 BNILDI_10570 ppnN nucleotide 5'-monophosphate nucleosidase insig. 27 48
  Escherichia coli ECRC98 JDDGAC_23850 ppnN nucleotide 5'-monophosphate nucleosidase insig. 27 48
  Escherichia coli ECRC99 KEDOAH_07945 ppnN nucleotide 5'-monophosphate nucleosidase no data 27 48
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00936 'Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase' transl_table=11 insig. 27 48
  Escherichia coli Nissle 1917 ECOLIN_RS15585 nucleotide 5'-monophosphate nucleosidase PpnN insig. 27 48
  Escherichia coli BW25113 b2795 ygdH hypothetical protein (NCBI) insig. 27 48
  Serratia liquefaciens MT49 IAI46_20320 LOG family protein strong 27 48
  Marinobacter adhaerens HP15 HP15_3408 conserved hypothetical protein cofit 26 48
  Kangiella aquimarina DSM 16071 B158DRAFT_2525 Predicted Rossmann fold nucleotide-binding protein insig. 28 49
  Dickeya dianthicola 67-19 HGI48_RS05070 LOG family protein cofit 28 48
  Dickeya dianthicola ME23 DZA65_RS05410 LOG family protein insig. 28 48
  Klebsiella michiganensis M5al BWI76_RS22870 LOG family protein sig. 27 48
  Klebsiella pneumoniae MKP103 KDGMDA_03400 nucleotide 5'-monophosphate nucleosidase PpnN insig. 27 48
  Klebsiella pneumoniae MRSN742743 KFA93_RS17330 ppnN;inference=COORDINATES nucleotide 5'-monophosphate nucleosidase PpnN insig. 27 48
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4850 Decarboxylase family protein insig. 27 48
  Pectobacterium carotovorum WPP14 HER17_RS16395 nucleotide 5'-monophosphate nucleosidase PpnN cofit 27 48
  Pseudomonas aeruginosa MRSN321 DY961_RS14905 LOG family protein insig. 27 92
  Pseudomonas aeruginosa PA14 IKLFDK_18455 cytochrome D ubiquinol oxidase subunit II strong 27 92
  Rhizobium sp. OAE497 ABIE40_RS01940 LOG family protein insig. 24 86
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_17295 ppnN nucleotide 5'-monophosphate nucleosidase PpnN cofit 29 48
  Erwinia tracheiphila SCR3 LU632_RS06275 ppnN nucleotide 5'-monophosphate nucleosidase PpnN cofit 29 48
  Erwinia amylovora T8 OLJFJH_09190 nucleotide 5'-monophosphate nucleosidase PpnN insig. 29 48
  Shewanella sp. ANA-3 Shewana3_2885 hypothetical protein (RefSeq) sig. 28 48
  Shewanella oneidensis MR-1 SO1550 conserved hypothetical protein (NCBI ptt file) strong 27 48
  Dickeya dadantii 3937 DDA3937_RS05070 LOG family protein cofit 27 48
  Shewanella amazonensis SB2B Sama_2419 hypothetical protein (RefSeq) sig. 28 48
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4666 Decarboxylase family protein insig. 28 84
  Shewanella loihica PV-4 Shew_2755 hypothetical protein (RefSeq) insig. 25 56
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3145 Decarboxylase family protein insig. 27 92
  Pantoea sp. MT58 IAI47_04045 LOG family protein strong 28 48
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16925 LOG family protein cofit 28 48
  Rhodanobacter denitrificans MT42 LRK55_RS13565 nucleotide 5'-monophosphate nucleosidase PpnN no data 26 49
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS13850 nucleotide 5'-monophosphate nucleosidase PpnN no data 26 49
  Rhodanobacter sp. FW510-T8 OKGIIK_03085 ppnN nucleotide 5'-monophosphate nucleosidase PpnN no data 26 49
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09795 nucleotide 5'-monophosphate nucleosidase PpnN no data 26 48
  Pseudomonas syringae pv. syringae B728a Psyr_1380 Conserved hypothetical protein 730 insig. 28 84
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1380 Conserved hypothetical protein 730 insig. 28 84
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS14750 nucleotide 5'-monophosphate nucleosidase PpnN no data 26 49