Homologs of GFF3898 from Sphingobium sp. HT1-2

'tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase (EC 2.1.1.200)' transl_table=11
SEED: tRNA:Cm32/Um32 methyltransferase

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF3898 'tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase (EC 2.1.1.200)' transl_table=11 cofit 100 100
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1984 rRNA methylase cofit 77 65
  Phaeobacter inhibens DSM 17395 PGA1_c15100 tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ sig. 49 65
  Dinoroseobacter shibae DFL-12 Dshi_1513 tRNA/rRNA methyltransferase (SpoU) (RefSeq) insig. 49 67
  Azospirillum brasilense Sp245 AZOBR_RS04270 RNA methyltransferase insig. 49 64
  Azospirillum sp. SherDot2 MPMX19_02031 tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ insig. 47 63
  Sinorhizobium meliloti 1021 SMc00482 hypothetical protein strong 47 64
  Rhodopseudomonas palustris CGA009 TX73_019850 TrmJ/YjtD family RNA methyltransferase insig. 46 65
  Rhizobium sp. OAE497 ABIE40_RS10270 RNA methyltransferase sig. 46 64
  Caulobacter crescentus NA1000 CCNA_02605 LasT-family rRNA methylase sig. 46 67
  Caulobacter crescentus NA1000 Δfur CCNA_02605 LasT-family rRNA methylase cofit 46 67
  Agrobacterium fabrum C58 Atu1868 tRNA/rRNA methyltransferase strong 45 64
  Rhodospirillum rubrum S1H Rru_A0696 RNA methyltransferase TrmH, group 1 (NCBI) insig. 47 64
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10425 RNA methyltransferase cofit 44 65
  Xanthobacter sp. DMC5 GFF1164 tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ insig. 46 64
  Magnetospirillum magneticum AMB-1 AMB_RS10750 RNA methyltransferase cofit 48 65
  Bosea sp. OAE506 ABIE41_RS13540 RNA methyltransferase insig. 47 63
  Pseudomonas sp. SVBP6 COO64_RS03880 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 38 62
  Methylophilus sp. DMC18 GFF437 tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ insig. 37 64
  Lysobacter sp. OAE881 ABIE51_RS14985 RNA methyltransferase insig. 39 63
  Acinetobacter baumannii LAC-4 RR41_RS11515 RNA methyltransferase insig. 35 63
  Pseudomonas stutzeri RCH2 Psest_1248 RNA methyltransferase, TrmH family, group 1 strong 37 63
  Pseudomonas aeruginosa MRSN321 DY961_RS13835 trmJ;go_function=RNA tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ sig. 37 62
  Pseudomonas aeruginosa PA14 IKLFDK_19655 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ strong 37 62
  Pseudomonas aeruginosa PUPa3 DQ20_RS43265 trmJ;go_function=RNA tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ sig. 37 62
  Pseudomonas syringae pv. syringae B728a Psyr_1234 RNA methyltransferase TrmH, group 1 insig. 35 63
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1234 RNA methyltransferase TrmH, group 1 insig. 35 63
  Paraburkholderia sabiae LMG 24235 QEN71_RS06100 RNA methyltransferase cofit 35 62
  Kangiella aquimarina DSM 16071 B158DRAFT_1456 RNA methyltransferase, TrmH family, group 1 insig. 33 66
  Pseudomonas fluorescens FW300-N2E3 AO353_15820 RNA methyltransferase sig. 37 62
  Shewanella loihica PV-4 Shew_2320 RNA methyltransferase (RefSeq) strong 35 64
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00540 tRNA/rRNA methyltransferase insig. 36 62
  Pseudomonas protegens RBAN4 FABNJH_25135 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 36 63
  Synechocystis sp000284455 PCC 6803 SGL_RS15835 TrmJ/YjtD family RNA methyltransferase strong 33 62
  Pseudomonas sp. S08-1 OH686_17460 tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase insig. 38 62
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_868 tRNA:Cm32/Um32 methyltransferase sig. 37 62
  Pseudomonas putida KT2440 PP_0839 tRNA Cm32/Um32 methyltransferase insig. 36 62
  Acinetobacter radioresistens SK82 MPMX26_01876 tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ cofit 33 62
  Pseudomonas simiae WCS417 PS417_23215 RNA methyltransferase insig. 36 62
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12970 RNA methyltransferase insig. 38 66
  Pseudomonas fluorescens SBW25 PFLU_RS24870 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 37 62
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24870 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ sig. 37 62
  Dechlorosoma suillum PS Dsui_2367 RNA methyltransferase, TrmH family, group 1 insig. 34 63
  Pseudomonas orientalis W4I3 QF045_RS25435 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 36 62
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04795 'tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ' transl_table=11 cofit 36 62
  Shewanella sp. ANA-3 Shewana3_2283 RNA methyltransferase (RefSeq) sig. 34 63
  Desulfovibrio vulgaris Hildenborough JW710 DVU2737 RNA methyltransferase, TrmH family (TIGR) insig. 33 63
  Acidovorax sp. GW101-3H11 Ac3H11_2277 putative periplasmic protein kinase ArgK and related GTPases of G3E family sig. 54 27
  Rhodanobacter sp. FW510-T8 OKGIIK_02340 trmJ RNA methyltransferase insig. 37 66
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4876 tRNA:Cm32/Um32 methyltransferase insig. 36 62
  Pseudomonas sp. BP01 JOY50_RS22835 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 35 62
  Cupriavidus basilensis FW507-4G11 RR42_RS06315 RNA methyltransferase insig. 35 62
  Rhodanobacter denitrificans MT42 LRK55_RS12670 RNA methyltransferase insig. 37 63
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3192 tRNA:Cm32/Um32 methyltransferase strong 36 62
  Paraburkholderia graminis OAS925 ABIE53_002713 tRNA/rRNA methyltransferase insig. 33 62
  Desulfovibrio vulgaris Miyazaki F DvMF_1155 RNA methyltransferase, TrmH family, group 1 (RefSeq) insig. 43 42
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS15630 RNA methyltransferase insig. 37 66
  Burkholderia phytofirmans PsJN BPHYT_RS12460 RNA methyltransferase insig. 35 62
  Shewanella oneidensis MR-1 SO2261 RNA methyltransferase, TrmH family, group 1 (NCBI ptt file) strong 34 63
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2282.1 tRNA:Cm32/Um32 methyltransferase insig. 36 63
  Pseudomonas fluorescens FW300-N2C3 AO356_06660 RNA methyltransferase strong 35 62
  Castellaniella sp019104865 MT123 ABCV34_RS00355 RNA methyltransferase insig. 32 63
  Alteromonas macleodii MIT1002 MIT1002_02806 tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ cofit 34 63
  Pseudomonas sp. RS175 PFR28_00283 'tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ' transl_table=11 sig. 36 63
  Synechococcus elongatus PCC 7942 Synpcc7942_1602 RNA methyltransferase TrmH, group 1 strong 33 63
  Pseudomonas segetis P6 ACVTMO_RS07450 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 36 62
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS16535 tRNA/rRNA methyltransferase insig. 35 51
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19895 RNA methyltransferase insig. 38 66
  Ralstonia solanacearum GMI1000 RS_RS05785 RNA methyltransferase insig. 36 62
  Klebsiella pneumoniae MKP103 KDGMDA_28295 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ sig. 35 63
  Klebsiella pneumoniae MRSN742743 KFA93_RS04865 trmJ;go_function=RNA tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ sig. 35 63
  Ralstonia solanacearum PSI07 RPSI07_RS18405 RNA methyltransferase insig. 35 62
  Pseudomonas sp. DMC3 GFF4353 tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ cofit 35 62
  Shewanella amazonensis SB2B Sama_1290 RNA methyltransferase (RefSeq) strong 35 63
  Herbaspirillum seropedicae SmR1 HSERO_RS08585 RNA methyltransferase insig. 32 64
  Herbaspirillum seropedicae SmR1 HSERO_RS02335 excinuclease ABC subunit C insig. 51 25
  Vibrio cholerae E7946 ATCC 55056 CSW01_03875 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 34 64
  Rhodanobacter sp. FW510-T8 OKGIIK_00785 GIY-YIG nuclease family protein insig. 43 35
  Dickeya dianthicola ME23 DZA65_RS16730 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 33 63
  Pantoea sp. MT58 IAI47_16225 tRNA/rRNA methyltransferase insig. 34 51
  Dickeya dadantii 3937 DDA3937_RS15555 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ sig. 33 64
  Marinobacter adhaerens HP15 HP15_1484 RNA methyltransferase, TrmH family, group 1 strong 34 63
  Dickeya dianthicola 67-19 HGI48_RS15655 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 33 63
  Erwinia tracheiphila SCR3 LU632_RS17880 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 34 64
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_02880 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 34 64
  Pectobacterium carotovorum WPP14 HER17_RS06005 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ cofit 33 63
  Serratia liquefaciens MT49 IAI46_19365 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 33 63
  Variovorax sp. OAS795 ABID97_RS20730 RNA methyltransferase insig. 31 61
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00620 GIY-YIG nuclease family protein insig. 49 25
  Rahnella sp. WP5 EX31_RS20555 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 33 63
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3650 tRNA:Cm32/Um32 methyltransferase no data 32 64
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2437 tRNA:Cm32/Um32 methyltransferase insig. 34 63
  Escherichia coli ECOR38 HEPCGN_20750 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 34 63
  Enterobacter sp. TBS_079 MPMX20_03413 tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ insig. 34 63
  Pantoea sp. MT58 IAI47_04995 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 32 63
  Variovorax sp. SCN45 GFF4680 tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase (EC 2.1.1.200) insig. 38 41
  Klebsiella michiganensis M5al BWI76_RS04235 tRNA/rRNA methyltransferase insig. 37 52
  Enterobacter sp. TBS_079 MPMX20_00709 putative tRNA/rRNA methyltransferase insig. 36 52
  Escherichia coli ECRC100 OKFHMN_21610 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 34 63
  Escherichia coli ECRC101 MCAODC_12140 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 34 63
  Escherichia coli ECRC102 NIAGMN_19380 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 34 63
  Escherichia coli ECRC62 BNILDI_12080 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 34 63
  Escherichia coli ECRC98 JDDGAC_25285 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 34 63
  Escherichia coli ECRC99 KEDOAH_06610 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ no data 34 63
  Escherichia coli BL21 ECD_02424 tRNA mC32,mU32 2'-O-methyltransferase, SAM-dependent sig. 34 63
  Escherichia fergusonii Becca EFB2_01358 tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ insig. 34 63
  Escherichia coli ECOR27 NOLOHH_13280 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 34 63
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01177 'tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ' transl_table=11 insig. 34 63
  Escherichia coli Nissle 1917 ECOLIN_RS14375 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ no data 34 63
  Escherichia coli BW25113 b2532 yfhQ predicted methyltransferase (NCBI) sig. 34 63
  Rahnella sp. WP5 EX31_RS03950 tRNA/rRNA methyltransferase insig. 36 52
  Enterobacter asburiae PDN3 EX28DRAFT_3612 RNA methyltransferase, TrmH family, group 1 insig. 36 52
  Serratia liquefaciens MT49 IAI46_03020 tRNA/rRNA methyltransferase insig. 39 44
  Klebsiella michiganensis M5al BWI76_RS21170 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ sig. 33 63
  Dickeya dadantii 3937 DDA3937_RS18420 tRNA/rRNA methyltransferase insig. 39 47
  Erwinia amylovora T8 OLJFJH_10355 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ insig. 31 63
  Escherichia fergusonii Becca EFB2_04042 tRNA (guanosine(18)-2'-O)-methyltransferase insig. 36 51
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS05285 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ cofit 31 63
  Dickeya dianthicola 67-19 HGI48_RS18350 tRNA/rRNA methyltransferase insig. 37 52
  Dickeya dianthicola ME23 DZA65_RS19490 tRNA/rRNA methyltransferase insig. 37 52
  Enterobacter asburiae PDN3 EX28DRAFT_0107 RNA methyltransferase, TrmH family, group 1 insig. 33 63
  Escherichia coli BL21 ECD_04279 putative methyltransferase insig. 36 48
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14970 RNA methyltransferase insig. 34 62
  Ralstonia solanacearum UW163 UW163_RS12440 RNA methyltransferase insig. 34 62
  Pectobacterium carotovorum WPP14 HER17_RS02785 tRNA/rRNA methyltransferase insig. 36 51
  Escherichia coli ECRC100 OKFHMN_11120 lasT tRNA/rRNA methyltransferase insig. 36 48
  Escherichia coli ECRC101 MCAODC_01635 lasT tRNA/rRNA methyltransferase insig. 36 48
  Escherichia coli ECRC102 NIAGMN_08970 lasT tRNA/rRNA methyltransferase insig. 36 48
  Escherichia coli ECRC98 JDDGAC_14715 lasT tRNA/rRNA methyltransferase insig. 36 48
  Escherichia coli ECRC99 KEDOAH_17035 lasT tRNA/rRNA methyltransferase no data 36 48
  Acidovorax sp. GW101-3H11 Ac3H11_3646 tRNA:Cm32/Um32 methyltransferase insig. 30 61
  Methanococcus maripaludis JJ MMJJ_RS03600 TrmJ/YjtD family RNA methyltransferase sig. 36 42
  Methanococcus maripaludis S2 MMP_RS01780 TrmJ/YjtD family RNA methyltransferase sig. 37 41
  Escherichia coli ECOR27 NOLOHH_03450 lasT tRNA/rRNA methyltransferase insig. 35 48
  Escherichia coli ECRC62 BNILDI_08150 lasT tRNA/rRNA methyltransferase insig. 35 48
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03659 hypothetical protein insig. 35 48
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1077 tRNA:Cm32/Um32 methyltransferase insig. 39 44
  Escherichia coli ECOR38 HEPCGN_09125 lasT tRNA/rRNA methyltransferase insig. 34 52
  Escherichia coli BW25113 b4403 yjtD predicted rRNA methyltransferase (NCBI) sig. 34 52
  Ralstonia sp. UNC404CL21Col ABZR87_RS10615 RNA methyltransferase insig. 33 62
  Klebsiella pneumoniae MKP103 KDGMDA_12500 tRNA/rRNA methyltransferase insig. 39 44
  Klebsiella pneumoniae MRSN742743 KFA93_RS11025 tRNA/rRNA methyltransferase insig. 39 44
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1064 Predicted endonuclease containing a URI domain insig. 51 22
  Marinobacter adhaerens HP15 HP15_3417 RNA methyltransferase, TrmH family, group 1 insig. 33 51
  Desulfovibrio vulgaris Miyazaki F DvMF_2126 Excinuclease ABC C subunit domain protein (RefSeq) insig. 47 21
  Lysobacter sp. OAE881 ABIE51_RS14940 GIY-YIG nuclease family protein insig. 47 22
  Shewanella amazonensis SB2B Sama_1753 putative RNA methyltransferase (RefSeq) sig. 36 41
  Magnetospirillum magneticum AMB-1 AMB_RS20825 excinuclease ABC subunit C insig. 43 24
  Kangiella aquimarina DSM 16071 B158DRAFT_1379 Predicted endonuclease containing a URI domain insig. 40 22
  Shewanella amazonensis SB2B Sama_0145 endonuclease (RefSeq) insig. 44 21
  Shewanella sp. ANA-3 Shewana3_0136 excinuclease ABC subunit C (RefSeq) insig. 42 22
  Kangiella aquimarina DSM 16071 B158DRAFT_0797 Predicted endonuclease containing a URI domain insig. 38 23
  Vibrio cholerae E7946 ATCC 55056 CSW01_17870 GIY-YIG nuclease family protein insig. 42 22
  Desulfovibrio vulgaris Hildenborough JW710 DVU3309 endo/excinuclease amino terminal domain protein (TIGR) sig. 38 27
  Burkholderia phytofirmans PsJN BPHYT_RS05470 excinuclease ABC subunit C insig. 41 22
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00216 putative endonuclease no data 40 22
  Enterobacter asburiae PDN3 EX28DRAFT_3204 Predicted endonuclease containing a URI domain insig. 38 22
  Enterobacter sp. TBS_079 MPMX20_04059 hypothetical protein insig. 36 24
  Marinobacter adhaerens HP15 HP15_2558 putative nuclease insig. 47 21
  Pseudomonas segetis P6 ACVTMO_RS17530 GIY-YIG nuclease family protein insig. 39 21
  Pectobacterium carotovorum WPP14 HER17_RS18145 GIY-YIG nuclease family protein cofit 42 21
  Pseudomonas sp. SVBP6 COO64_RS04380 GIY-YIG nuclease family protein insig. 37 23
  Klebsiella michiganensis M5al BWI76_RS24955 hypothetical protein insig. 35 25
  Rhodopseudomonas palustris CGA009 TX73_023300 GIY-YIG nuclease family protein insig. 40 23
  Rhodopseudomonas palustris CGA009 TX73_019735 GIY-YIG nuclease family protein insig. 40 23
  Rhodopseudomonas palustris CGA009 TX73_018235 GIY-YIG nuclease family protein insig. 41 22
  Dickeya dianthicola ME23 DZA65_RS03300 GIY-YIG nuclease family protein insig. 40 22
  Escherichia coli BW25113 b3155 yhbQ hypothetical protein (NCBI) insig. 39 21
  Paraburkholderia graminis OAS925 ABIE53_001343 putative endonuclease sig. 39 22
  Dickeya dianthicola 67-19 HGI48_RS03305 GIY-YIG nuclease family protein insig. 43 22
  Pseudomonas putida KT2440 PP_0972 UPF0213 protein PP_0972 insig. 39 21
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_908 FIG00955494: hypothetical protein no data 39 21
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1705 FIG00955494: hypothetical protein insig. 39 21
  Paraburkholderia sabiae LMG 24235 QEN71_RS24905 GIY-YIG nuclease family protein insig. 39 22
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS17170 GIY-YIG nuclease family protein insig. 42 22
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1380.1 COG2827: putative endonuclease containing a URI domain insig. 39 21
  Pseudomonas fluorescens FW300-N2E3 AO353_04580 GIY-YIG nuclease insig. 39 21
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5411 FIG00955494: hypothetical protein insig. 39 21
  Dickeya dadantii 3937 DDA3937_RS03130 GIY-YIG nuclease family protein insig. 38 22
  Pseudomonas sp. BP01 JOY50_RS11230 GIY-YIG nuclease family protein insig. 39 21
  Pseudomonas fluorescens FW300-N2C3 AO356_17425 GIY-YIG nuclease insig. 39 21
  Escherichia coli ECOR27 NOLOHH_09990 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 38 21
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00545 hypothetical protein insig. 38 21
  Pseudomonas stutzeri RCH2 Psest_1218 Predicted endonuclease containing a URI domain insig. 38 21
  Escherichia coli ECOR38 HEPCGN_17065 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 38 21
  Escherichia coli ECRC100 OKFHMN_18190 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 38 21
  Escherichia coli ECRC101 MCAODC_08710 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 38 21
  Escherichia coli ECRC102 NIAGMN_15950 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 38 21
  Escherichia coli ECRC98 JDDGAC_21815 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 38 21
  Escherichia coli ECRC99 KEDOAH_09960 yhbQ DNA damage response exodeoxyribonuclease YhbQ no data 38 21
  Pseudomonas sp. RS175 PFR28_03536 hypothetical protein insig. 39 21
  Escherichia coli BL21 ECD_03022 GIY-YIG nuclease superfamily protein insig. 38 21
  Escherichia fergusonii Becca EFB2_00668 hypothetical protein insig. 38 21
  Escherichia coli ECRC62 BNILDI_01540 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 38 21
  Escherichia coli Nissle 1917 ECOLIN_RS18125 DNA damage response exodeoxyribonuclease YhbQ insig. 38 21
  Variovorax sp. OAS795 ABID97_RS06665 GIY-YIG nuclease family protein insig. 36 21
  Pseudomonas sp. DMC3 GFF1943 hypothetical protein insig. 40 21
  Pantoea sp. MT58 IAI47_16950 GIY-YIG nuclease family protein insig. 42 20
  Shewanella loihica PV-4 Shew_0038 excinuclease ABC subunit C (RefSeq) insig. 38 21
  Shewanella oneidensis MR-1 SO0145 hypothetical URI domain endonuclease (NCBI ptt file) insig. 37 21
  Pseudomonas syringae pv. syringae B728a Psyr_1080 Excinuclease ABC, C subunit, N-terminal insig. 39 21
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1080 Excinuclease ABC, C subunit, N-terminal insig. 39 21
  Serratia liquefaciens MT49 IAI46_02030 GIY-YIG nuclease family protein insig. 41 22
  Pseudomonas protegens RBAN4 FABNJH_05470 GIY-YIG domain-containing protein insig. 36 23
  Rahnella sp. WP5 EX31_RS08465 GIY-YIG nuclease family protein insig. 37 22
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1513 FIG137864: putative endonuclease containing a URI domain insig. 36 21
  Caulobacter crescentus NA1000 CCNA_00744 GIY-YIG endonuclease domain protein insig. 40 23
  Caulobacter crescentus NA1000 Δfur CCNA_00744 GIY-YIG endonuclease domain protein cofit 40 23
  Xanthobacter sp. DMC5 GFF1651 hypothetical protein insig. 35 24
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00190 GIY-YIG nuclease family protein insig. 38 21
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14020 UPF0213 protein EJP617_15320 insig. 42 21
  Erwinia tracheiphila SCR3 LU632_RS20990 GIY-YIG nuclease family protein insig. 42 21
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21115 GIY-YIG nuclease family protein insig. 37 24
  Bosea sp. OAE506 ABIE41_RS22145 GIY-YIG nuclease family protein insig. 37 23
  Pseudomonas aeruginosa MRSN321 DY961_RS13600 GIY-YIG nuclease family protein insig. 39 21
  Pseudomonas aeruginosa PA14 IKLFDK_19855 UPF0213 protein PA3854 insig. 39 21
  Pseudomonas aeruginosa PUPa3 DQ20_RS48890 GIY-YIG nuclease family protein insig. 39 21
  Pseudomonas orientalis W4I3 QF045_RS07970 GIY-YIG nuclease family protein insig. 37 21
  Erwinia amylovora T8 OLJFJH_07290 putative endonuclease GIY-YIG superfamily insig. 41 20
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01205 hypothetical protein insig. 36 21
  Dechlorosoma suillum PS Dsui_2028 putative endonuclease containing a URI domain no data 42 18
  Rhodopseudomonas palustris CGA009 TX73_019185 GIY-YIG nuclease family protein insig. 38 22
  Cupriavidus basilensis FW507-4G11 RR42_RS36170 hypothetical protein insig. 41 15
  Klebsiella pneumoniae MRSN742743 KFA93_RS13020 GIY-YIG nuclease family protein insig. 32 22
  Kangiella aquimarina DSM 16071 B158DRAFT_0265 Predicted endonuclease containing a URI domain insig. 39 20
  Sinorhizobium meliloti 1021 SMc00344 hypothetical protein insig. 38 24
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4403 Predicted endonuclease containing a URI domain strong 35 24
  Klebsiella pneumoniae MKP103 KDGMDA_05825 UPF0213 protein KPN78578_35340 insig. 32 22
  Pseudomonas sp. S08-1 OH686_17835 Endo/excinuclease domain protein insig. 39 21
  Pseudomonas fluorescens SBW25 PFLU_RS05060 GIY-YIG nuclease family protein insig. 37 21
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05060 GIY-YIG nuclease family protein insig. 37 21
  Pseudomonas simiae WCS417 PS417_04990 GIY-YIG nuclease insig. 37 21
  Xanthobacter sp. DMC5 GFF151 hypothetical protein insig. 37 21
  Sphingobium sp. HT1-2 GFF130 Excinuclease ABC, C subunit-like cofit 41 22
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS08770 GIY-YIG nuclease family protein insig. 36 21
  Sinorhizobium meliloti 1021 SMc02088 hypothetical protein insig. 36 23
  Lysobacter sp. OAE881 ABIE51_RS12690 GIY-YIG nuclease family protein insig. 36 20
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17365 GIY-YIG nuclease family protein insig. 33 21
  Castellaniella sp019104865 MT123 ABCV34_RS14245 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 31 43
  Cellulophaga baltica 18 M666_RS20225 GIY-YIG nuclease family protein sig. 36 20
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20690 GIY-YIG nuclease family protein insig. 40 20
  Rhodopseudomonas palustris CGA009 TX73_018790 GIY-YIG nuclease family protein insig. 46 18
  Rhodanobacter denitrificans MT42 LRK55_RS10195 GIY-YIG nuclease family protein cofit 39 20
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10555 GIY-YIG nuclease family protein sig. 39 20
  Rhodanobacter sp. FW510-T8 OKGIIK_15005 yhbQ putative endonuclease, GIY-YIG superfamily insig. 39 20
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS08445 endonuclease insig. 38 21
  Rhodanobacter denitrificans MT42 LRK55_RS08010 GIY-YIG nuclease family protein insig. 36 22
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00765 GIY-YIG nuclease family protein insig. 36 21
  Caulobacter crescentus NA1000 CCNA_01405 GIY-YIG domain protein strong 35 21
  Caulobacter crescentus NA1000 Δfur CCNA_01405 GIY-YIG domain protein cofit 35 21