Homologs of GFF3863 from Variovorax sp. SCN45

RNA polymerase sigma factor RpoE
SEED: RNA polymerase sigma factor RpoE
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF3863 RNA polymerase sigma factor RpoE insig. 100 100
o Variovorax sp. OAS795 ABID97_RS08330 RNA polymerase sigma factor RpoE strong 92 100
o Acidovorax sp. GW101-3H11 Ac3H11_1573 RNA polymerase sigma factor RpoE no data 80 89
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3339 RNA polymerase sigma factor RpoE cofit 72 86
o Herbaspirillum seropedicae SmR1 HSERO_RS09625 RNA polymerase sigma factor RpoE no data 60 88
o Burkholderia phytofirmans PsJN BPHYT_RS14405 RNA polymerase sigma factor RpoE no data 61 88
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04355 RNA polymerase, sigma-24 subunit, RpoE no data 61 88
o Paraburkholderia graminis OAS925 ABIE53_003043 RNA polymerase sigma-70 factor (ECF subfamily) strong 61 88
o Paraburkholderia sabiae LMG 24235 QEN71_RS04575 RNA polymerase sigma factor RpoE strong 61 88
o Methylophilus sp. DMC18 GFF2730 RNA polymerase sigma-H factor no data 55 93
o Cupriavidus basilensis FW507-4G11 RR42_RS14080 RNA polymerase sigma factor RpoE strong 59 88
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14445 RNA polymerase sigma factor RpoE strong 58 88
o Ralstonia solanacearum GMI1000 RS_RS05225 RNA polymerase sigma factor RpoE strong 58 88
o Ralstonia solanacearum PSI07 RPSI07_RS19015 RNA polymerase sigma factor RpoE strong 58 88
o Ralstonia solanacearum UW163 UW163_RS11910 RNA polymerase sigma factor RpoE insig. 58 88
o Dechlorosoma suillum PS Dsui_2453 RNA polymerase sigma factor RpoE no data 55 88
o Ralstonia sp. UNC404CL21Col ABZR87_RS10165 RNA polymerase sigma factor RpoE strong 58 88
o Castellaniella sp019104865 MT123 ABCV34_RS08355 RNA polymerase sigma factor RpoE strong 56 88
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3681.1 RNA polymerase sigma factor RpoE insig. 52 91
o Lysobacter sp. OAE881 ABIE51_RS13890 RNA polymerase sigma factor RpoE strong 54 89
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07180 RNA polymerase sigma factor RpoE strong 52 87
o Vibrio cholerae E7946 ATCC 55056 CSW01_12485 RNA polymerase sigma factor RpoE no data 51 83
o Shewanella sp. ANA-3 Shewana3_3032 RNA polymerase sigma factor RpoE (RefSeq) no data 52 84
o Shewanella oneidensis MR-1 SO1342 rpoE RNA polymerase sigma-24 factor (NCBI ptt file) no data 52 84
o Rhodanobacter denitrificans MT42 LRK55_RS16655 RNA polymerase sigma factor RpoE no data 52 87
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16940 RNA polymerase sigma factor RpoE strong 52 87
o Alteromonas macleodii MIT1002 MIT1002_02719 Sigma-24 no data 51 85
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS12005 RNA polymerase sigma factor RpoE no data 53 87
o Kangiella aquimarina DSM 16071 B158DRAFT_2180 RNA polymerase, sigma-24 subunit, RpoE strong 50 86
o Pseudomonas fluorescens SBW25 PFLU_RS07230 RNA polymerase sigma factor RpoE sig. 53 85
o Pseudomonas fluorescens SBW25-INTG PFLU_RS07230 RNA polymerase sigma factor RpoE strong 53 85
o Pseudomonas sp. DMC3 GFF2277 RNA polymerase sigma-H factor cofit 53 85
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01572 RNA polymerase sigma-H factor cofit 53 85
o Pseudomonas sp. RS175 PFR28_00690 RNA polymerase sigma-H factor strong 53 85
o Pseudomonas orientalis W4I3 QF045_RS09835 RNA polymerase sigma factor RpoE cofit 53 85
o Pseudomonas simiae WCS417 PS417_07120 RNA polymerase sigma-H factor strong 53 85
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4516 RNA polymerase sigma-H factor AlgT sig. 53 85
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3323 RNA polymerase sigma-H factor AlgT no data 53 85
o Pseudomonas fluorescens FW300-N2E3 AO353_17625 RNA polymerase subunit sigma strong 53 85
o Pseudomonas fluorescens FW300-N2C3 AO356_04575 RNA polymerase subunit sigma strong 53 85
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2756 RNA polymerase sigma-H factor AlgT strong 53 85
o Pseudomonas segetis P6 ACVTMO_RS06940 rpoE RNA polymerase sigma factor RpoE strong 52 85
o Rahnella sp. WP5 EX31_RS21800 RNA polymerase sigma factor RpoE no data 52 83
o Rhodanobacter sp. FW510-T8 OKGIIK_07900 rpoE RNA polymerase sigma factor RpoE strong 52 87
o Pseudomonas sp. SVBP6 COO64_RS16525 rpoE RNA polymerase sigma factor RpoE insig. 53 85
o Pseudomonas sp. BP01 JOY50_RS14665 rpoE RNA polymerase sigma factor RpoE insig. 53 85
o Pseudomonas putida KT2440 PP_1427 RNA polymerase sigma E factor sig. 53 85
o Pseudomonas stutzeri RCH2 Psest_3100 RNA polymerase sigma factor RpoE strong 53 85
o Dickeya dadantii 3937 DDA3937_RS15765 RNA polymerase sigma factor RpoE strong 52 83
o Pseudomonas aeruginosa MRSN321 DY961_RS08690 rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma RNA polymerase sigma factor RpoE strong 53 85
o Pseudomonas aeruginosa PA14 IKLFDK_03265 alginate biosynthesis protein AlgZ/FimS strong 53 85
o Pseudomonas aeruginosa PUPa3 DQ20_RS44160 rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma RNA polymerase sigma factor RpoE strong 53 85
o Pseudomonas syringae pv. syringae B728a Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE strong 53 85
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE strong 53 85
o Pseudomonas sp. S08-1 OH686_20045 RNA polymerase sigma factor RpoE strong 52 85
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS14740 RNA polymerase sigma factor RpoE no data 51 84
o Dickeya dianthicola 67-19 HGI48_RS15850 RNA polymerase sigma factor RpoE cofit 51 83
o Dickeya dianthicola ME23 DZA65_RS16930 RNA polymerase sigma factor RpoE strong 51 83
o Enterobacter asburiae PDN3 EX28DRAFT_0072 RNA polymerase sigma factor RpoE no data 51 83
o Enterobacter sp. TBS_079 MPMX20_03444 ECF RNA polymerase sigma-E factor no data 51 83
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2107 RNA polymerase sigma factor RpoE no data 51 83
o Shewanella loihica PV-4 Shew_1048 RNA polymerase sigma factor RpoE (RefSeq) cofit 51 84
o Pantoea sp. MT58 IAI47_04850 RNA polymerase sigma factor RpoE no data 51 83
o Klebsiella michiganensis M5al BWI76_RS21355 RNA polymerase sigma factor RpoE no data 51 83
o Escherichia coli BL21 ECD_02467 RNA polymerase sigma E factor no data 51 83
o Escherichia fergusonii Becca EFB2_01323 ECF RNA polymerase sigma-E factor no data 51 83
o Escherichia coli ECOR27 NOLOHH_13050 rpoE RNA polymerase sigma factor RpoE no data 51 83
o Escherichia coli ECOR38 HEPCGN_20520 rpoE RNA polymerase sigma factor RpoE no data 51 83
o Escherichia coli ECRC100 OKFHMN_21375 rpoE RNA polymerase sigma factor RpoE no data 51 83
o Escherichia coli ECRC101 MCAODC_11905 rpoE RNA polymerase sigma factor RpoE no data 51 83
o Escherichia coli ECRC102 NIAGMN_19145 rpoE RNA polymerase sigma factor RpoE no data 51 83
o Escherichia coli ECRC62 BNILDI_11850 rpoE RNA polymerase sigma factor RpoE no data 51 83
o Escherichia coli ECRC98 JDDGAC_25040 rpoE RNA polymerase sigma factor RpoE no data 51 83
o Escherichia coli ECRC99 KEDOAH_06845 rpoE RNA polymerase sigma factor RpoE no data 51 83
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01134 ECF RNA polymerase sigma-E factor no data 51 83
o Escherichia coli Nissle 1917 ECOLIN_RS14560 RNA polymerase sigma factor RpoE no data 51 83
o Escherichia coli BW25113 b2573 rpoE RNA polymerase, sigma 24 (sigma E) factor (NCBI) no data 51 83
o Klebsiella pneumoniae MKP103 KDGMDA_28480 RNA polymerase sigma factor RpoE no data 51 83
o Klebsiella pneumoniae MRSN742743 KFA93_RS04695 rpoE;go_function=DNA RNA polymerase sigma factor RpoE no data 51 83
o Serratia liquefaciens MT49 IAI46_19585 RNA polymerase sigma factor RpoE no data 51 83
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_01235 rpoE RNA polymerase sigma factor RpoE strong 50 83
o Erwinia tracheiphila SCR3 LU632_RS15425 rpoE RNA polymerase sigma factor RpoE strong 49 83
o Pectobacterium carotovorum WPP14 HER17_RS05780 RNA polymerase sigma factor RpoE no data 50 83
o Erwinia amylovora T8 OLJFJH_10215 RNA polymerase sigma factor RpoE strong 48 83
o Marinobacter adhaerens HP15 HP15_775 RNA polymerase sigma-70 RpoE type insig. 43 94
o Shewanella amazonensis SB2B Sama_0874 RNA polymerase sigma factor RpoE (RefSeq) strong 49 85
  Paraburkholderia sabiae LMG 24235 QEN71_RS18240 RNA polymerase sigma factor insig. 36 92
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2047 RNA polymerase sigma factor, sigma-70 family strong 32 80
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13970 RNA polymerase sigma factor cofit 32 84
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01538 RNA polymerase sigma-70 factor, ECF subfamily insig. 34 92
  Paraburkholderia graminis OAS925 ABIE53_005146 RNA polymerase sigma factor (sigma-70 family) sig. 36 79
  Pseudomonas stutzeri RCH2 Psest_3456 RNA polymerase sigma factor, sigma-70 family insig. 36 82
  Synechocystis sp000284455 PCC 6803 SGL_RS06480 sigma-70 family RNA polymerase sigma factor no data 34 83
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00665 RNA polymerase subunit sigma-24 strong 32 83
  Castellaniella sp019104865 MT123 ABCV34_RS11175 sigma-70 family RNA polymerase sigma factor insig. 37 77
  Synechococcus elongatus PCC 7942 Synpcc7942_1923 sigG RNA polymerase sigma factor RpoE strong 37 80
  Mycobacterium tuberculosis H37Rv Rv1221 Alternative RNA polymerase sigma factor SigE insig. 36 74
  Herbaspirillum seropedicae SmR1 HSERO_RS12085 RNA polymerase sigma-E factor protein insig. 31 80
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19215 RNA polymerase subunit sigma sig. 34 68
  Rhodanobacter sp. FW510-T8 OKGIIK_12575 rpoE RNA polymerase subunit sigma-24 insig. 34 86
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11315 sigma-70 family RNA polymerase sigma factor insig. 32 86
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS19220 sigma-70 family RNA polymerase sigma factor insig. 32 82
  Shewanella amazonensis SB2B Sama_2611 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 32 80
  Lysobacter sp. OAE881 ABIE51_RS16295 sigma-70 family RNA polymerase sigma factor insig. 31 89
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04205 sigma-70 family RNA polymerase sigma factor insig. 32 86
  Rhodanobacter denitrificans MT42 LRK55_RS11045 sigma-70 family RNA polymerase sigma factor cofit 31 95
  Cellulophaga baltica 18 M666_RS18230 RNA polymerase sigma factor insig. 28 80
  Mycobacterium tuberculosis H37Rv Rv3223c Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE) insig. 33 68
  Bacteroides stercoris CC31F HMPREF1181_RS08110 sigma-70 family RNA polymerase sigma factor insig. 34 83
  Kangiella aquimarina DSM 16071 B158DRAFT_2027 RNA polymerase sigma factor, sigma-70 family insig. 32 78
  Rhodanobacter denitrificans MT42 LRK55_RS05200 sigma-70 family RNA polymerase sigma factor insig. 35 77
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05425 sigma-70 family RNA polymerase sigma factor insig. 35 77
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15190 RNA polymerase sigma factor insig. 30 76
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11965 RNA polymerase subunit sigma insig. 31 70
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3183.1 RNA polymerase sigma factor RpoE insig. 29 79
  Pseudomonas aeruginosa MRSN321 DY961_RS00460 RNA polymerase sigma factor insig. 29 83
  Pseudomonas aeruginosa PUPa3 DQ20_RS40570 RNA polymerase sigma factor insig. 29 83
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04580 sigma-70 family RNA polymerase sigma factor insig. 35 82
  Rhodopseudomonas palustris CGA009 TX73_003315 RNA polymerase sigma factor insig. 31 92
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01700 RNA polymerase sigma factor insig. 29 76
  Lysobacter sp. OAE881 ABIE51_RS18540 sigma-70 family RNA polymerase sigma factor insig. 31 84
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS22010 RNA polymerase sigma factor insig. 30 85
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS00445 sigma-70 family RNA polymerase sigma factor insig. 29 79
  Bifidobacterium breve UCC2003 BBR_RS15930 RNA polymerase sigma factor insig. 29 82
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05195 sigma-70 family RNA polymerase sigma factor insig. 30 78
  Rhodanobacter sp. FW510-T8 OKGIIK_14780 RNA polymerase subunit sigma-70 insig. 29 78
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04785 sigma-70 family RNA polymerase sigma factor insig. 28 87
  Variovorax sp. OAS795 ABID97_RS28845 RNA polymerase sigma factor insig. 31 80
  Sinorhizobium meliloti 1021 SM_b20592 RNA polymerase sigma factor insig. 31 88
  Rhodanobacter denitrificans MT42 LRK55_RS04975 sigma-70 family RNA polymerase sigma factor cofit 29 78
  Caulobacter crescentus NA1000 CCNA_02837 RNA polymerase ECF-type sigma factor insig. 34 79
  Caulobacter crescentus NA1000 Δfur CCNA_02837 RNA polymerase ECF-type sigma factor cofit 34 79
  Bacteroides stercoris CC31F HMPREF1181_RS11830 sigma-70 family RNA polymerase sigma factor insig. 33 78
  Pseudomonas aeruginosa PA14 IKLFDK_16830 RNA polymerase subunit sigma-24 insig. 28 83
  Castellaniella sp019104865 MT123 ABCV34_RS07155 RNA polymerase sigma factor insig. 31 84
  Synechocystis sp000284455 PCC 6803 SGL_RS08165 sigma-70 family RNA polymerase sigma factor strong 29 79
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0287 RNA polymerase sigma factor, sigma-70 family strong 26 81
  Alteromonas macleodii MIT1002 MIT1002_00882 Sigma-W factor insig. 31 79
  Shewanella oneidensis MR-1 SO3840 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 28 80
  Paraburkholderia sabiae LMG 24235 QEN71_RS22515 RNA polymerase sigma factor insig. 34 68
  Sphingobium sp. HT1-2 GFF4485 RNA polymerase sigma factor cnrH cofit 31 79
  Shewanella loihica PV-4 Shew_2956 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 30 88
  Cellulophaga baltica 18 M666_RS11420 RNA polymerase sigma factor insig. 28 82
  Xanthobacter sp. DMC5 GFF1190 ECF RNA polymerase sigma factor SigR insig. 35 64
  Bacteroides ovatus ATCC 8483 BACOVA_05461 Sigma-70 region 2 cofit 32 77
  Pseudomonas sp. S08-1 OH686_05515 RNA polymerase sigma factor RpoE cofit 29 83
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18950 sigma-70 family RNA polymerase sigma factor insig. 33 69
  Cellulophaga baltica 18 M666_RS15960 RNA polymerase sigma factor insig. 28 82
  Bacteroides thetaiotaomicron VPI-5482 BT4571 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 27 83
  Bacteroides thetaiotaomicron VPI-5482 BT1817 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 29 84
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2952 RNA polymerase sigma factor, sigma-70 family strong 30 82
  Bacteroides thetaiotaomicron VPI-5482 BT4647 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 30 80
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1738 RNA polymerase sigma-54 factor RpoN insig. 29 80
  Bosea sp. OAE506 ABIE41_RS07610 sigma-70 family RNA polymerase sigma factor insig. 28 84
  Azospirillum brasilense Sp245 AZOBR_RS28490 hypothetical protein sig. 32 82
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS15730 RNA polymerase sigma factor sig. 31 76
  Paraburkholderia graminis OAS925 ABIE53_002003 RNA polymerase sigma factor (sigma-70 family) sig. 36 63
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01799 RNA polymerase sigma-70 factor, ECF subfamily insig. 32 65
  Phocaeicola dorei CL03T12C01 ABI39_RS11710 RNA polymerase sigma factor insig. 31 76
  Rhodanobacter sp. FW510-T8 OKGIIK_01380 rpoE RNA polymerase subunit sigma-24 insig. 33 74
  Bacteroides thetaiotaomicron VPI-5482 BT3190 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 31 79
  Shewanella sp. ANA-3 Shewana3_0763 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 28 80
  Pseudomonas syringae pv. syringae B728a Psyr_1217 Sigma-70 region 2:Sigma-70 region 4 strong 32 71
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1217 Sigma-70 region 2:Sigma-70 region 4 cofit 32 71
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16945 RNA polymerase sigma factor sig. 28 80
  Cupriavidus basilensis FW507-4G11 RR42_RS16520 RNA polymerase sigma factor insig. 31 65
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04360 sigma-70 family RNA polymerase sigma factor insig. 26 84
  Azospirillum sp. SherDot2 MPMX19_05475 hypothetical protein no data 34 80
  Phocaeicola dorei CL03T12C01 ABI39_RS12855 RNA polymerase sigma factor insig. 28 80
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16905 sigma-70 family RNA polymerase sigma factor insig. 27 80
  Rhizobium sp. OAE497 ABIE40_RS15675 sigma-70 family RNA polymerase sigma factor insig. 36 64
  Phocaeicola dorei CL03T12C01 ABI39_RS12815 sigma-70 family RNA polymerase sigma factor insig. 27 80
  Rhodopseudomonas palustris CGA009 TX73_023085 RNA polymerase sigma factor cofit 33 80
  Bacteroides thetaiotaomicron VPI-5482 BT2044 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 31 83
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3635.1 RNA polymerase ECF-type sigma factor insig. 34 64
  Alteromonas macleodii MIT1002 MIT1002_03807 Sigma-W factor insig. 26 80
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4018 RNA polymerase sigma-E factor insig. 29 80
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21575 RNA polymerase subunit sigma insig. 27 85
  Bacteroides thetaiotaomicron VPI-5482 BT4347 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 29 75
  Pseudomonas aeruginosa PA14 IKLFDK_14715 ECF family RNA polymerase sigma factor SbrI insig. 29 87
  Bacteroides ovatus ATCC 8483 BACOVA_05165 Sigma-70 region 2 insig. 28 75
  Pseudomonas aeruginosa MRSN321 DY961_RS02510 sbrI;inference=COORDINATES ECF family RNA polymerase sigma factor SbrI insig. 30 77
  Pseudomonas aeruginosa PUPa3 DQ20_RS33080 sbrI;inference=COORDINATES ECF family RNA polymerase sigma factor SbrI insig. 30 77
  Pseudomonas sp. DMC3 GFF2343 ECF RNA polymerase sigma-E factor insig. 29 84
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10790 RNA polymerase sigma factor insig. 31 80
  Bacteroides ovatus ATCC 8483 BACOVA_00669 Sigma-70 region 2 insig. 30 83
  Burkholderia phytofirmans PsJN BPHYT_RS08845 RNA polymerase sigma factor insig. 31 75
  Azospirillum brasilense Sp245 AZOBR_RS23735 RNA polymerase no data 35 66
  Pseudomonas fluorescens FW300-N2C3 AO356_10740 RNA polymerase subunit sigma insig. 28 80
  Pseudomonas sp. RS175 PFR28_04750 RNA polymerase sigma-H factor insig. 28 81
  Pseudomonas sp. RS175 PFR28_00741 ECF RNA polymerase sigma-E factor insig. 26 84
  Azospirillum sp. SherDot2 MPMX19_05214 ECF RNA polymerase sigma factor SigE insig. 30 83
  Pseudomonas orientalis W4I3 QF045_RS06435 RNA polymerase sigma factor insig. 33 74
  Pseudomonas simiae WCS417 PS417_03450 RNA polymerase sigma factor insig. 31 77
  Rhodopseudomonas palustris CGA009 TX73_024905 sigma-70 family RNA polymerase sigma factor insig. 27 83
  Rhodopseudomonas palustris CGA009 TX73_002850 sigma-70 family RNA polymerase sigma factor insig. 32 81
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00075 RNA polymerase sigma factor cofit 30 82
  Phocaeicola dorei CL03T12C01 ABI39_RS09920 sigma-70 family RNA polymerase sigma factor insig. 29 87
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16705 RNA polymerase sigma factor strong 29 78
  Bacteroides stercoris CC31F HMPREF1181_RS05860 sigma-70 family RNA polymerase sigma factor insig. 25 75
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14290 sigma-70 family RNA polymerase sigma factor insig. 29 87
  Pseudomonas segetis P6 ACVTMO_RS16165 RNA polymerase sigma factor sig. 26 79
  Pseudomonas fluorescens SBW25 PFLU_RS03525 RNA polymerase sigma factor insig. 31 70
  Pseudomonas fluorescens SBW25-INTG PFLU_RS03525 RNA polymerase sigma factor insig. 31 70
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4527 RNA polymerase sigma-70 factor, ECF subfamily insig. 31 72
  Cellulophaga baltica 18 M666_RS13930 sigma-70 family RNA polymerase sigma factor cofit 28 76
  Pseudomonas simiae WCS417 PS417_00810 RNA polymerase sigma factor insig. 28 80
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04263 ECF RNA polymerase sigma-E factor cofit 25 84
  Rhodanobacter denitrificans MT42 LRK55_RS07625 RNA polymerase sigma factor insig. 30 76
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07895 RNA polymerase sigma factor insig. 30 76
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14945 RNA polymerase subunit sigma-24 strong 28 85
  Herbaspirillum seropedicae SmR1 HSERO_RS03905 RNA polymerase subunit sigma-24 insig. 30 72
  Shewanella loihica PV-4 Shew_1231 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 30 81
  Pseudomonas fluorescens SBW25 PFLU_RS00840 RNA polymerase sigma factor insig. 28 80
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00840 RNA polymerase sigma factor sig. 28 80
  Fusobacterium nucleatum SB010 HUW76_07635 RNA polymerase sigma factor no data 28 69
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2692 RNA polymerase sigma factor RpoE sig. 25 84
  Pseudomonas orientalis W4I3 QF045_RS22475 RNA polymerase sigma factor insig. 25 84
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0865 RNA polymerase sigma factor, sigma-70 family insig. 28 77
  Pseudomonas fluorescens FW300-N2E3 AO353_18235 RNA polymerase subunit sigma-24 insig. 26 84
  Pseudomonas fluorescens FW300-N2E3 AO353_21275 RNA polymerase subunit sigma insig. 33 61
  Xanthobacter sp. DMC5 GFF1406 RNA polymerase sigma-H factor insig. 31 80
  Shewanella oneidensis MR-1 SO3551 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 31 81
  Agrobacterium fabrum C58 Atu1485 ECF family sigma factor insig. 29 69
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00391 RNA polymerase sigma-H factor cofit 28 80
  Kangiella aquimarina DSM 16071 B158DRAFT_0596 RNA polymerase sigma factor, sigma-70 family insig. 24 80
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00902 ECF RNA polymerase sigma factor SigC insig. 31 70
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00795 sigma-70 family RNA polymerase sigma factor strong 28 77
  Cellulophaga baltica 18 M666_RS13935 sigma-70 family RNA polymerase sigma factor no data 28 76
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS01445 sigma-70 family RNA polymerase sigma factor insig. 26 84
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3390 RNA polymerase sigma factor RpoE insig. 26 84
  Pseudomonas fluorescens SBW25 PFLU_RS22255 RNA polymerase sigma factor cofit 25 84
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22255 RNA polymerase sigma factor insig. 25 84
  Dinoroseobacter shibae DFL-12 Dshi_3423 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 28 87
  Shewanella amazonensis SB2B Sama_1068 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 30 88
  Variovorax sp. SCN45 GFF5806 RNA polymerase ECF-type sigma factor insig. 32 72
  Phaeobacter inhibens DSM 17395 PGA1_c08510 RNA polymerase sigma factor (ECF01 subgroup, ECF20 subgroup) insig. 32 90
  Shewanella sp. ANA-3 Shewana3_3152 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) cofit 32 81
  Pseudomonas orientalis W4I3 QF045_RS03845 RNA polymerase sigma factor insig. 28 77
  Bosea sp. OAE506 ABIE41_RS11620 sigma-70 family RNA polymerase sigma factor insig. 29 81
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07040 RNA polymerase sigma factor insig. 35 73
  Kangiella aquimarina DSM 16071 B158DRAFT_0015 RNA polymerase sigma factor, sigma-70 family insig. 33 66
  Rhodopseudomonas palustris CGA009 TX73_009355 sigma-70 family RNA polymerase sigma factor insig. 29 80
  Mycobacterium tuberculosis H37Rv Rv2069 RNA polymerase sigma factor, ECF subfamily, SigC insig. 28 82
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0443 RNA polymerase sigma factor, sigma-70 family insig. 27 81
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2774 RNA polymerase sigma factor, sigma-70 family insig. 26 78
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS00650 RNA polymerase sigma factor insig. 29 76
  Rhodanobacter sp. FW510-T8 OKGIIK_14380 RNA polymerase sigma factor insig. 28 76
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19605 RNA polymerase insig. 26 81
  Pseudomonas simiae WCS417 PS417_20565 RNA polymerase subunit sigma-24 insig. 25 84