| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Variovorax sp. SCN45 | GFF3185 | | SAM-dependent methyltransferase | insig. | 100 | 100 |
| o | Paraburkholderia graminis OAS925 | ABIE53_001057 | | ubiquinone/menaquinone biosynthesis C-methylase UbiE | insig. | 81 | 99 |
| o | Variovorax sp. OAS795 | ABID97_RS28145 | | methyltransferase domain-containing protein | insig. | 81 | 99 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4084 | | ubiquinone/menaquinone biosynthesis methyltransferase | insig. | 75 | 99 |
| o | Rhizobium sp. OAE497 | ABIE40_RS22315 | | methyltransferase domain-containing protein | insig. | 67 | 99 |
| o | Agrobacterium fabrum C58 | Atu0390 | | ubiquinone/menaquinone biosynthesis methyltransferase | insig. | 63 | 99 |
| o | Azospirillum sp. SherDot2 | MPMX19_02804 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 58 | 100 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS21220 | | class I SAM-dependent methyltransferase | insig. | 57 | 96 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS15935 | | class I SAM-dependent methyltransferase | insig. | 53 | 99 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS04095 | | SAM-dependent methyltransferase PhcB | insig. | 57 | 97 |
| | Rhizobium sp. OAE497 | ABIE40_RS29210 | | class I SAM-dependent methyltransferase | insig. | 43 | 49 |
| | Caulobacter crescentus NA1000 | CCNA_03610 | | methyltransferase | insig. | 38 | 64 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03610 | | methyltransferase | cofit | 38 | 64 |
| | Azospirillum brasilense Sp245 | AZOBR_RS09315 | | hypothetical protein | no data | 38 | 63 |
| | Agrobacterium fabrum C58 | Atu1625 | | methyltransferase | insig. | 31 | 69 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS16515 | | methyltransferase domain-containing protein | insig. | 38 | 50 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS10765 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 30 | 73 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS10405 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 30 | 73 |
| | Pseudomonas sp. RS175 | PFR28_00315 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 33 | 58 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4023 | | PUTATIVE METHYLTRANSFERASE | insig. | 46 | 38 |
| | Paraburkholderia graminis OAS925 | ABIE53_006338 | | ubiquinone/menaquinone biosynthesis C-methylase UbiE | insig. | 40 | 47 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4955 | | Methyltransferase | insig. | 32 | 52 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05895 | | Methylase involved in ubiquinone/menaquinone biosynthesis | no data | 45 | 39 |
| | Sphingobium sp. HT1-2 | GFF450 | | SAM-dependent methyltransferase | cofit | 32 | 58 |
| | Azospirillum sp. SherDot2 | MPMX19_01135 | | putative methyltransferase YcgJ | insig. | 45 | 42 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30135 | | SAM-dependent methyltransferase | insig. | 34 | 63 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3788 | | PUTATIVE METHYLTRANSFERASE | insig. | 44 | 38 |
| | Variovorax sp. SCN45 | GFF1219 | | SAM-dependent methyltransferase | insig. | 33 | 66 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05988 | | Ubiquinone/menaquinone biosynthesis C-methylase UbiE | no data | 33 | 52 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS17180 | | class I SAM-dependent methyltransferase | sig. | 41 | 39 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS03975 | | class I SAM-dependent methyltransferase | insig. | 37 | 45 |
| | Azospirillum sp. SherDot2 | MPMX19_01375 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | no data | 30 | 76 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1255 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 31 | 63 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS16660 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 30 | 58 |
| | Paraburkholderia graminis OAS925 | ABIE53_000771 | | demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 31 | 68 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21750 | | S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB | insig. | 45 | 37 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS11170 | | class I SAM-dependent methyltransferase | insig. | 43 | 38 |
| | Pseudomonas stutzeri RCH2 | Psest_3940 | | ubiquinone/menaquinone biosynthesis methyltransferases | no data | 29 | 61 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4305 | | PUTATIVE METHYLTRANSFERASE | insig. | 37 | 48 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS02005 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 31 | 68 |
| | Pseudomonas sp. RS175 | PFR28_04989 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 30 | 60 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS03550 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 29 | 73 |
| | Pseudomonas sp. BP01 | JOY50_RS07515 | | class I SAM-dependent methyltransferase | no data | 42 | 38 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4022 | | Methyltransferase type 11 | no data | 33 | 56 |
| | Pseudomonas sp. DMC3 | GFF3076 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 30 | 60 |
| | Pseudomonas putida KT2440 | PP_1987 | | Methlytransferase, UbiE/COQ5 family | insig. | 40 | 43 |
| | Variovorax sp. OAS795 | ABID97_RS27290 | | methyltransferase domain-containing protein | insig. | 31 | 79 |
| | Dechlorosoma suillum PS | Dsui_0861 | | ubiquinone/menaquinone biosynthesis methyltransferase | no data | 31 | 58 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_12380 | | ubiquinone biosynthesis methyltransferase UbiE | no data | 30 | 60 |
| | Methylophilus sp. DMC18 | GFF1923 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 30 | 65 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2684 | | Methyltransferase domain | insig. | 37 | 42 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00196 | | Ubiquinone/menaquinone biosynthesis C-methylase UbiE | insig. | 37 | 42 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04613 | | demethylmenaquinone methyltransferase /2-octaprenyl-6-methoxy-1,4-benzoquinone methylase | no data | 30 | 68 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4794 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 30 | 66 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_299 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 30 | 60 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1562 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 30 | 60 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_09505 | | ubiquinone biosynthesis methyltransferase UbiE | no data | 30 | 60 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3779 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 30 | 60 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS11145 | ubiE;go_function=methyltransferase | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 29 | 60 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_28210 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 29 | 60 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS50940 | ubiE;go_function=methyltransferase | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 29 | 60 |
| | Marinobacter adhaerens HP15 | HP15_3191 | | ubiquinone/menaquinone biosynthesis methyltransferase UbiE | no data | 37 | 38 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2034 | | Methyltransferase | insig. | 34 | 40 |
| | Klebsiella michiganensis M5al | BWI76_RS01305 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 29 | 58 |
| | Paraburkholderia graminis OAS925 | ABIE53_001313 | | SAM-dependent methyltransferase | sig. | 38 | 42 |
| | Rhizobium sp. OAE497 | ABIE40_RS07025 | | methyltransferase domain-containing protein | insig. | 36 | 63 |
| | Pseudomonas sp. SVBP6 | COO64_RS23350 | | class I SAM-dependent methyltransferase | insig. | 40 | 39 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS24960 | | class I SAM-dependent methyltransferase | insig. | 40 | 50 |
| | Mycobacterium tuberculosis H37Rv | Rv1405c | | Putative methyltransferase | insig. | 38 | 41 |
| | Sinorhizobium meliloti 1021 | SMa0169 | | methyltransferase | insig. | 36 | 58 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS19485 | | ubiquinone/menaquinone biosynthesis methyltransferase | no data | 30 | 61 |
| | Pseudomonas sp. BP01 | JOY50_RS16620 | | class I SAM-dependent methyltransferase | insig. | 39 | 40 |
| | Variovorax sp. OAS795 | ABID97_RS12270 | | class I SAM-dependent methyltransferase | no data | 32 | 58 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS03165 | | ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 30 | 68 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_09795 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 28 | 58 |
| | Acinetobacter baumannii LAC-4 | RR41_RS17230 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 36 | 37 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS01915 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 30 | 60 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS01915 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 30 | 60 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00597 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 30 | 60 |
| | Pseudomonas simiae WCS417 | PS417_01870 | | ubiquinone biosynthesis methyltransferase UbiE | no data | 30 | 60 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_13120 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 29 | 58 |
| | Klebsiella michiganensis M5al | BWI76_RS05430 | | UbiE/COQ5 family methyltransferase | sig. | 37 | 42 |
| | Pseudomonas sp. S08-1 | OH686_10145 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 36 | 40 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS16425 | | SAM-dependent methyltransferase | insig. | 31 | 52 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS07400 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 31 | 60 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0389 | | 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone methyltransferase | no data | 36 | 40 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0389 | | 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone methyltransferase | no data | 36 | 40 |
| | Pseudomonas segetis P6 | ACVTMO_RS21115 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 29 | 60 |
| | Escherichia fergusonii Becca | EFB2_04782 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 28 | 58 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS22115 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 58 |
| | Pseudomonas putida KT2440 | PP_5011 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 37 | 41 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS14475 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 30 | 65 |
| | Escherichia coli ECOR27 | NOLOHH_06435 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 58 |
| | Escherichia coli ECOR38 | HEPCGN_12935 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | strong | 28 | 58 |
| | Escherichia coli ECRC100 | OKFHMN_14305 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 58 |
| | Escherichia coli ECRC101 | MCAODC_04810 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 58 |
| | Escherichia coli ECRC102 | NIAGMN_12060 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 58 |
| | Escherichia coli ECRC62 | BNILDI_05095 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 58 |
| | Escherichia coli ECRC98 | JDDGAC_17930 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 58 |
| | Escherichia coli ECRC99 | KEDOAH_13845 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 58 |