Homologs of PS417_13780 from Pseudomonas simiae WCS417

integrase
SEED: Site-specific recombinase, phage integrase family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_13780 integrase strong 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS14840 tyrosine-type recombinase/integrase insig. 97 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS14840 tyrosine-type recombinase/integrase insig. 97 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4812 Site-specific recombinase, phage integrase family insig. 86 100
o Pseudomonas sp. DMC3 GFF2728 Tyrosine recombinase XerC cofit 85 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3231 Site-specific recombinase, phage integrase family insig. 86 99
o Pseudomonas sp. SVBP6 COO64_RS14605 xerC tyrosine recombinase XerC insig. 81 100
o Pseudomonas syringae pv. syringae B728a Psyr_2751 Phage integrase:Phage integrase, N-terminal SAM-like protein insig. 75 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2751 Phage integrase:Phage integrase, N-terminal SAM-like protein insig. 75 99
o Pseudomonas sp. BP01 JOY50_RS05635 xerC tyrosine recombinase XerC insig. 78 96
o Pseudomonas putida KT2440 PP_2841 Site-specific recombinase, phage integrase family insig. 78 96
o Enterobacter sp. TBS_079 MPMX20_04667 Tyrosine recombinase XerC sig. 38 98
o Alteromonas macleodii MIT1002 MIT1002_03221 Tyrosine recombinase XerC insig. 31 96
o Shewanella oneidensis MR-1 SO3884 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 27 95
  Shewanella oneidensis MR-1 SO4306 xerC integrase/recombinase XerC (NCBI ptt file) strong 31 82
  Shewanella sp. ANA-3 Shewana3_0393 tyrosine recombinase XerC (RefSeq) strong 29 83
  Pseudomonas fluorescens FW300-N2E3 AO353_04365 recombinase XerD strong 31 74
  Pseudomonas aeruginosa PA14 IKLFDK_19085 site-specific tyrosine recombinase XerD cofit 30 74
  Pseudomonas sp. S08-1 OH686_17750 tyrosine recombinase XerD insig. 29 74
  Pseudomonas sp. RS175 PFR28_00331 Tyrosine recombinase XerD strong 30 74
  Pantoea sp. MT58 IAI47_18400 tyrosine recombinase XerC sig. 28 79
  Pseudomonas fluorescens FW300-N2C3 AO356_06385 recombinase XerD strong 30 74
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10220 site-specific tyrosine recombinase XerD insig. 34 56
  Pseudomonas sp. SVBP6 COO64_RS04910 xerD site-specific tyrosine recombinase XerD sig. 30 74
  Shewanella amazonensis SB2B Sama_3247 integrase/recombinase XerC (RefSeq) strong 28 91
  Pseudomonas simiae WCS417 PS417_22895 tyrosine recombinase XerD strong 29 74
  Pseudomonas syringae pv. syringae B728a Psyr_1286 tyrosine recombinase XerD subunit sig. 29 74
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1286 tyrosine recombinase XerD subunit sig. 29 74
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3011 Tyrosine recombinase XerD insig. 30 74
  Herbaspirillum seropedicae SmR1 HSERO_RS04265 tyrosine recombinase XerD insig. 30 78
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1721 Tyrosine recombinase XerD strong 29 74
  Pseudomonas fluorescens SBW25 PFLU_RS24560 site-specific tyrosine recombinase XerD sig. 29 74
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24560 site-specific tyrosine recombinase XerD strong 29 74
  Acidovorax sp. GW101-3H11 Ac3H11_302 Tyrosine recombinase XerD no data 32 63
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3145 Tyrosine recombinase XerD no data 29 74
  Azospirillum sp. SherDot2 MPMX19_00143 Tyrosine recombinase XerC insig. 31 72
  Dickeya dadantii 3937 DDA3937_RS19890 tyrosine recombinase XerC no data 28 90
  Pseudomonas sp. DMC3 GFF1987 Tyrosine recombinase XerD insig. 29 74
  Vibrio cholerae E7946 ATCC 55056 CSW01_00650 tyrosine recombinase XerC strong 32 60
  Erwinia amylovora T8 OLJFJH_06415 tyrosine recombinase XerC strong 30 81
  Azospirillum sp. SherDot2 MPMX19_00151 Tyrosine recombinase XerC insig. 29 77
  Rhodanobacter sp. FW510-T8 OKGIIK_11520 xerD site-specific tyrosine recombinase XerD insig. 33 57
  Pseudomonas stutzeri RCH2 Psest_3129 tyrosine recombinase XerD insig. 30 73
  Rahnella sp. WP5 EX31_RS15165 tyrosine recombinase XerC strong 28 79
  Serratia liquefaciens MT49 IAI46_00725 tyrosine recombinase XerC insig. 29 94
  Azospirillum sp. SherDot2 MPMX19_02643 Tyrosine recombinase XerD no data 31 77
  Pseudomonas sp. BP01 JOY50_RS11700 xerD site-specific tyrosine recombinase XerD insig. 29 74
  Pseudomonas putida KT2440 PP_1468 Tyrosine recombinase XerD strong 29 74
  Dickeya dianthicola ME23 DZA65_RS21090 tyrosine recombinase XerC insig. 27 90
  Dechlorosoma suillum PS Dsui_2597 tyrosine recombinase XerD cofit 35 50
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19225 site-specific tyrosine recombinase XerD strong 32 50
  Methylophilus sp. DMC18 GFF2342 Tyrosine recombinase XerD insig. 30 65
  Dickeya dianthicola 67-19 HGI48_RS20045 tyrosine recombinase XerC strong 27 90
  Pseudomonas aeruginosa PA14 IKLFDK_27050 tyrosine recombinase XerC cofit 30 80
  Alteromonas macleodii MIT1002 MIT1002_00157 Tyrosine recombinase XerC insig. 29 80
  Klebsiella michiganensis M5al BWI76_RS01210 tyrosine recombinase XerC strong 28 79
  Dickeya dadantii 3937 DDA3937_RS03300 site-specific tyrosine recombinase XerD insig. 28 91
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5461 Tyrosine recombinase XerD insig. 30 63
  Caulobacter crescentus NA1000 CCNA_03101 site-specific tyrosine recombinase XerD strong 29 87
  Caulobacter crescentus NA1000 Δfur CCNA_03101 site-specific tyrosine recombinase XerD cofit 29 87
  Shewanella loihica PV-4 Shew_0325 tyrosine recombinase XerC (RefSeq) sig. 25 91
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1809 tyrosine recombinase XerD insig. 33 55
  Kangiella aquimarina DSM 16071 B158DRAFT_0244 tyrosine recombinase XerC subunit strong 28 80
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS05285 site-specific tyrosine recombinase XerD insig. 32 50
  Escherichia coli ECRC102 NIAGMN_17335 xerD site-specific tyrosine recombinase XerD no data 29 78
  Escherichia coli ECOR38 HEPCGN_18860 xerD site-specific tyrosine recombinase XerD sig. 29 78
  Marinobacter adhaerens HP15 HP15_250 site-specific tyrosine recombinase XerC strong 27 94
  Kangiella aquimarina DSM 16071 B158DRAFT_2265 tyrosine recombinase XerD strong 32 50
  Escherichia coli BL21 ECD_02726 site-specific tyrosine recombinase strong 29 78
  Escherichia fergusonii Becca EFB2_01007 Tyrosine recombinase XerD strong 29 78
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00821 Tyrosine recombinase XerD sig. 29 78
  Escherichia coli Nissle 1917 ECOLIN_RS16125 site-specific tyrosine recombinase XerD strong 29 78
  Escherichia coli BW25113 b2894 xerD site-specific tyrosine recombinase XerD (NCBI) strong 29 78
  Escherichia coli ECOR27 NOLOHH_11495 xerD site-specific tyrosine recombinase XerD cofit 29 78
  Escherichia coli ECRC100 OKFHMN_19570 xerD site-specific tyrosine recombinase XerD cofit 29 78
  Escherichia coli ECRC101 MCAODC_10090 xerD site-specific tyrosine recombinase XerD no data 29 78
  Escherichia coli ECRC62 BNILDI_10025 xerD site-specific tyrosine recombinase XerD cofit 29 78
  Escherichia coli ECRC98 JDDGAC_23210 xerD site-specific tyrosine recombinase XerD no data 29 78
  Escherichia coli ECRC99 KEDOAH_08570 xerD site-specific tyrosine recombinase XerD no data 29 78
  Shewanella loihica PV-4 Shew_0770 tyrosine recombinase XerD (RefSeq) strong 28 75
  Cellulophaga baltica 18 M666_RS11310 site-specific tyrosine recombinase XerD sig. 34 50
  Dickeya dianthicola 67-19 HGI48_RS03440 site-specific tyrosine recombinase XerD insig. 27 91
  Dickeya dianthicola ME23 DZA65_RS03485 site-specific tyrosine recombinase XerD no data 27 91
  Pseudomonas putida KT2440 PP_5230 Tyrosine recombinase XerC strong 29 80
  Pectobacterium carotovorum WPP14 HER17_RS01350 tyrosine recombinase XerC strong 28 80
  Pseudomonas sp. BP01 JOY50_RS22610 xerC tyrosine recombinase XerC insig. 29 79
  Rhodanobacter denitrificans MT42 LRK55_RS04515 site-specific tyrosine recombinase XerD strong 32 50
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04735 site-specific tyrosine recombinase XerD insig. 32 50
  Enterobacter sp. TBS_079 MPMX20_03753 Tyrosine recombinase XerD strong 28 78
  Bacteroides stercoris CC31F HMPREF1181_RS00625 tyrosine recombinase XerC cofit 26 88
  Lysobacter sp. OAE881 ABIE51_RS04495 site-specific tyrosine recombinase XerD strong 31 58
  Bacteroides stercoris CC31F HMPREF1181_RS01250 site-specific tyrosine recombinase XerD insig. 26 93
  Variovorax sp. OAS795 ABID97_RS20265 site-specific tyrosine recombinase XerD insig. 30 63
  Klebsiella michiganensis M5al BWI76_RS23815 site-specific tyrosine recombinase XerD no data 27 77
  Erwinia tracheiphila SCR3 LU632_RS05975 xerD site-specific tyrosine recombinase XerD no data 26 76
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04705 site-specific tyrosine recombinase XerD sig. 32 50
  Acinetobacter radioresistens SK82 MPMX26_00169 Tyrosine recombinase XerD no data 32 50
  Azospirillum brasilense Sp245 AZOBR_RS03240 recombinase XerD insig. 32 58
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09520 site-specific tyrosine recombinase XerD sig. 29 67
  Enterobacter asburiae PDN3 EX28DRAFT_4480 tyrosine recombinase XerC no data 26 84