Homologs of GFF2048 from Xanthobacter sp. DMC5

RecBCD enzyme subunit RecB
SEED: FIG061771: ATP-dependent nuclease subunit A

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF2048 RecBCD enzyme subunit RecB no data 100 100
o Rhodopseudomonas palustris CGA009 TX73_000385 double-strand break repair helicase AddA cofit 45 99
o Sinorhizobium meliloti 1021 SMc02760 ATP-dependent nuclease/helicase no data 41 98
o Rhizobium sp. OAE497 ABIE40_RS19360 double-strand break repair helicase AddA strong 40 98
o Magnetospirillum magneticum AMB-1 AMB_RS21065 double-strand break repair helicase AddA no data 42 97
o Azospirillum sp. SherDot2 MPMX19_02722 ATP-dependent helicase/nuclease subunit A no data 41 97
o Agrobacterium fabrum C58 Atu0023 ATP-dependant DNA helicase no data 38 96
o Rhodospirillum rubrum S1H Rru_A3434 UvrD/REP helicase (NCBI) no data 40 97
o Bosea sp. OAE506 ABIE41_RS02725 double-strand break repair helicase AddA strong 40 98
o Caulobacter crescentus NA1000 CCNA_03652 ATP-dependent nuclease subunit A strong 41 97
o Caulobacter crescentus NA1000 Δfur CCNA_03652 ATP-dependent nuclease subunit A cofit 41 97
o Dinoroseobacter shibae DFL-12 Dshi_3438 Double-strand break repair helicase AddA (RefSeq) no data 37 98
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11290 double-strand break repair helicase AddA insig. 39 97
o Phaeobacter inhibens DSM 17395 PGA1_c35310 double strand break repair helicase AddA no data 36 98
o Sphingobium sp. HT1-2 GFF4951 FIG061771: ATP-dependent nuclease subunit A no data 37 96
  Sphingomonas koreensis DSMZ 15582 Ga0059261_4027 DNA helicase/exodeoxyribonuclease V, subunit A (EC 3.1.11.5) no data 39 68
o Dechlorosoma suillum PS Dsui_3214 ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing no data 30 96
o Ralstonia solanacearum PSI07 RPSI07_RS18225 ATP-dependent exonuclease no data 30 96
  Ralstonia solanacearum UW163 UW163_RS12615 ATP-dependent exonuclease no data 32 73
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15145 ATP-dependent exonuclease no data 32 73
o Acidovorax sp. GW101-3H11 Ac3H11_469 UvrD/REP helicase no data 29 84
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4243 ATP-dependent DNA helicase pcrA (EC 3.6.1.-) strong 28 75
o Herbaspirillum seropedicae SmR1 HSERO_RS04330 ATP-dependent exonuclease strong 27 96
  Cupriavidus basilensis FW507-4G11 RR42_RS13295 ATP-dependent exonuclease no data 31 75
  Variovorax sp. OAS795 ABID97_RS14665 UvrD-helicase domain-containing protein sig. 30 76
o Variovorax sp. SCN45 GFF1106 UvrD/REP helicase insig. 28 96
  Synechococcus elongatus PCC 7942 Synpcc7942_1157 hypothetical protein insig. 25 74
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07665 exodeoxyribonuclease V subunit beta strong 28 72
  Synechococcus elongatus PCC 7942 Synpcc7942_2168 pcrA ATP-dependent DNA helicase, Rep family insig. 25 44
  Synechocystis sp000284455 PCC 6803 SGL_RS06660 DNA helicase PcrA strong 25 45
  Pseudomonas sp. SVBP6 COO64_RS02680 recB exodeoxyribonuclease V subunit beta insig. 26 73
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1301 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) no data 26 43
  Klebsiella pneumoniae MKP103 KDGMDA_03810 exodeoxyribonuclease V subunit beta insig. 27 43
  Rahnella sp. WP5 EX31_RS20735 exodeoxyribonuclease V subunit beta strong 26 72
  Erwinia tracheiphila SCR3 LU632_RS06190 recB exodeoxyribonuclease V subunit beta no data 28 43
  Enterobacter asburiae PDN3 EX28DRAFT_2895 DNA helicase/exodeoxyribonuclease V, beta subunit (EC 3.1.11.5) no data 27 43
  Enterobacter sp. TBS_079 MPMX20_03683 RecBCD enzyme subunit RecB strong 27 44
  Pseudomonas simiae WCS417 PS417_23775 exodeoxyribonuclease V subunit beta strong 27 44
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_17205 recB exodeoxyribonuclease V subunit beta no data 28 43
  Escherichia coli Nissle 1917 ECOLIN_RS15830 exodeoxyribonuclease V subunit beta no data 26 43
  Escherichia coli ECOR38 HEPCGN_19305 recB exodeoxyribonuclease V subunit beta strong 26 43
  Vibrio cholerae E7946 ATCC 55056 CSW01_11780 exodeoxyribonuclease V subunit beta strong 27 43
  Escherichia fergusonii Becca EFB2_01064 RecBCD enzyme subunit RecB strong 26 43
  Escherichia coli ECRC100 OKFHMN_20050 recB exodeoxyribonuclease V subunit beta no data 25 43
  Escherichia coli ECRC101 MCAODC_10575 recB exodeoxyribonuclease V subunit beta no data 25 43
  Escherichia coli ECRC102 NIAGMN_17820 recB exodeoxyribonuclease V subunit beta no data 25 43
  Escherichia coli ECRC98 JDDGAC_23715 recB exodeoxyribonuclease V subunit beta no data 25 43
  Escherichia coli ECRC99 KEDOAH_08080 recB exodeoxyribonuclease V subunit beta no data 25 43
  Acinetobacter radioresistens SK82 MPMX26_00272 RecBCD enzyme subunit RecB strong 25 41
  Escherichia coli ECRC62 BNILDI_10415 recB exodeoxyribonuclease V subunit beta insig. 25 43
  Lysobacter sp. OAE881 ABIE51_RS01025 exodeoxyribonuclease V subunit beta strong 30 44
  Escherichia coli BL21 ECD_02668 exonuclease V (RecBCD complex), beta subunit no data 25 43
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00910 RecBCD enzyme subunit RecB no data 25 43
  Escherichia coli BW25113 b2820 recB exonuclease V (RecBCD complex), beta subunit (NCBI) strong 25 43
  Klebsiella michiganensis M5al BWI76_RS23230 exodeoxyribonuclease V subunit beta strong 27 43
  Pseudomonas sp. RS175 PFR28_00007 RecBCD enzyme subunit RecB insig. 25 73
  Escherichia coli ECOR27 NOLOHH_11935 recB exodeoxyribonuclease V subunit beta no data 25 43
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5353.1 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) no data 29 43
  Pantoea sp. MT58 IAI47_03965 exodeoxyribonuclease V subunit beta no data 27 43
  Desulfovibrio vulgaris Hildenborough JW710 DVU2062 ATP-dependent DNA helicase, UvrD/REP family (TIGR) sig. 28 40
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS17000 exodeoxyribonuclease V subunit beta no data 27 43
  Erwinia amylovora T8 OLJFJH_09100 exodeoxyribonuclease V subunit beta no data 27 47
  Acinetobacter baumannii LAC-4 RR41_RS17205 UvrD-helicase domain-containing protein no data 26 40
  Kangiella aquimarina DSM 16071 B158DRAFT_2168 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) strong 25 43
  Pseudomonas fluorescens SBW25 PFLU_RS25590 exodeoxyribonuclease V subunit beta strong 26 51
  Pseudomonas fluorescens SBW25-INTG PFLU_RS25590 exodeoxyribonuclease V subunit beta no data 26 51
  Pseudomonas orientalis W4I3 QF045_RS26010 exodeoxyribonuclease V subunit beta cofit 26 44
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0292 Superfamily I DNA and RNA helicases no data 22 48
  Dickeya dianthicola ME23 DZA65_RS11480 exodeoxyribonuclease V subunit beta no data 27 44
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07840 ATP-dependent helicase no data 23 43
  Dickeya dianthicola 67-19 HGI48_RS11100 exodeoxyribonuclease V subunit beta no data 27 44
  Dickeya dadantii 3937 DDA3937_RS11080 exodeoxyribonuclease V subunit beta insig. 27 45
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12980 ATP-dependent DNA helicase no data 22 47
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3460 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) insig. 25 55
  Pseudomonas fluorescens FW300-N2C3 AO356_07915 exodeoxyribonuclease V subunit beta sig. 25 49
  Rhodopseudomonas palustris CGA009 TX73_011430 UvrD-helicase domain-containing protein cofit 26 44
  Dechlorosoma suillum PS Dsui_1227 DNA/RNA helicase, superfamily I strong 25 44
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04901 RecBCD enzyme subunit RecB cofit 25 44
  Pseudomonas sp. DMC3 GFF4913 RecBCD enzyme subunit RecB sig. 26 44
  Pseudomonas fluorescens FW300-N2E3 AO353_06045 exodeoxyribonuclease V subunit beta strong 26 44
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1235 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) sig. 26 44
  Serratia liquefaciens MT49 IAI46_20405 exodeoxyribonuclease V subunit beta no data 27 43
  Marinobacter adhaerens HP15 HP15_3713 exodeoxyribonuclease V, beta subunit no data 24 72
  Methylophilus sp. DMC18 GFF360 RecBCD enzyme subunit RecB cofit 27 43
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5114.1 ATP-dependent DNA helicase UvrD/PcrA sig. 25 44
  Pseudomonas putida KT2440 PP_4673 Chi activated ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease no data 27 44
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_08930 rep DNA helicase Rep no data 24 49
  Erwinia tracheiphila SCR3 LU632_RS24280 rep DNA helicase Rep no data 24 49
  Pseudomonas sp. BP01 JOY50_RS27635 recB exodeoxyribonuclease V subunit beta no data 27 44
  Alteromonas macleodii MIT1002 MIT1002_00153 DNA helicase II sig. 25 44
  Mycobacterium tuberculosis H37Rv Rv0630c Probable exonuclease V (beta chain) RecB (exodeoxyribonuclease V beta chain)(exodeoxyribonuclease V polypeptide) (chi-specific endonuclease) insig. 26 45
  Kangiella aquimarina DSM 16071 B158DRAFT_0238 Superfamily I DNA and RNA helicases strong 24 44
  Shewanella sp. ANA-3 Shewana3_0469 uvrD DNA-dependent helicase II (RefSeq) strong 24 44
  Cellulophaga baltica 18 M666_RS14620 ATP-dependent helicase insig. 23 44
  Mycobacterium tuberculosis H37Rv Rv0949 Probable ATP-dependent DNA helicase II UvrD1 insig. 26 52
  Pseudomonas syringae pv. syringae B728a Psyr_0681 DNA helicase/exodeoxyribonuclease V, beta subunit no data 26 44
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0681 DNA helicase/exodeoxyribonuclease V, beta subunit no data 26 44
  Vibrio cholerae E7946 ATCC 55056 CSW01_01015 DNA helicase II strong 24 46
  Klebsiella pneumoniae MKP103 KDGMDA_09710 DNA helicase II sig. 24 45
  Sphingobium sp. HT1-2 GFF1640 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) insig. 25 47