Homologs of GFF1406 from Xanthobacter sp. DMC5

RNA polymerase sigma-H factor
SEED: RNA polymerase sigma-70 factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF1406 RNA polymerase sigma-H factor insig. 100 100
  Rhodopseudomonas palustris CGA009 TX73_003315 RNA polymerase sigma factor insig. 43 94
o Azospirillum brasilense Sp245 AZOBR_RS28490 hypothetical protein sig. 46 93
  Azospirillum brasilense Sp245 AZOBR_RS31600 RNA polymerase insig. 46 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4220 RNA polymerase sigma factor RpoE insig. 47 90
  Azospirillum sp. SherDot2 MPMX19_05214 ECF RNA polymerase sigma factor SigE insig. 42 94
o Burkholderia phytofirmans PsJN BPHYT_RS24975 RNA polymerase sigma24 factor strong 46 95
o Caulobacter crescentus NA1000 CCNA_02837 RNA polymerase ECF-type sigma factor insig. 43 91
o Caulobacter crescentus NA1000 Δfur CCNA_02837 RNA polymerase ECF-type sigma factor cofit 43 91
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10790 RNA polymerase sigma factor insig. 40 95
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02732 RNA polymerase sigma-70 factor, ECF subfamily insig. 44 94
o Magnetospirillum magneticum AMB-1 AMB_RS14160 RNA polymerase sigma factor cofit 39 100
  Azospirillum sp. SherDot2 MPMX19_05475 hypothetical protein no data 50 80
o Phaeobacter inhibens DSM 17395 PGA1_c08510 RNA polymerase sigma factor (ECF01 subgroup, ECF20 subgroup) insig. 41 94
  Azospirillum sp. SherDot2 MPMX19_04274 RNA polymerase sigma-H factor insig. 48 82
o Paraburkholderia graminis OAS925 ABIE53_005321 RNA polymerase sigma factor (sigma-70 family) sig. 40 95
o Agrobacterium fabrum C58 Atu3084 RNA polymerase sigma factor insig. 39 94
  Rhodopseudomonas palustris CGA009 TX73_023085 RNA polymerase sigma factor cofit 44 90
o Pseudomonas fluorescens SBW25 PFLU_RS12745 RNA polymerase sigma factor insig. 41 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS12745 RNA polymerase sigma factor insig. 41 91
o Cupriavidus basilensis FW507-4G11 RR42_RS05810 RNA polymerase sigma factor insig. 37 89
o Variovorax sp. SCN45 GFF4544 RNA polymerase sigma factor RpoE insig. 42 83
o Paraburkholderia sabiae LMG 24235 QEN71_RS16180 RNA polymerase sigma factor insig. 43 99
o Pseudomonas simiae WCS417 PS417_11995 RNA polymerase sigma factor insig. 41 91
o Pseudomonas protegens RBAN4 FABNJH_20920 RNA polymerase sigma factor insig. 40 92
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02674 hypothetical protein cofit 42 91
o Rhodospirillum rubrum S1H Rru_A2537 Sigma-24 (FecI) (NCBI) insig. 37 90
o Alteromonas macleodii MIT1002 MIT1002_02719 Sigma-24 no data 32 89
o Rhodanobacter denitrificans MT42 LRK55_RS16655 RNA polymerase sigma factor RpoE no data 34 87
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16940 RNA polymerase sigma factor RpoE strong 34 87
o Lysobacter sp. OAE881 ABIE51_RS13890 RNA polymerase sigma factor RpoE strong 33 91
o Rhodanobacter sp. FW510-T8 OKGIIK_07900 rpoE RNA polymerase sigma factor RpoE strong 32 89
o Shewanella loihica PV-4 Shew_1048 RNA polymerase sigma factor RpoE (RefSeq) cofit 33 91
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS12005 RNA polymerase sigma factor RpoE no data 32 89
o Shewanella sp. ANA-3 Shewana3_3032 RNA polymerase sigma factor RpoE (RefSeq) no data 34 89
o Vibrio cholerae E7946 ATCC 55056 CSW01_12485 RNA polymerase sigma factor RpoE no data 32 89
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07180 RNA polymerase sigma factor RpoE strong 34 89
o Shewanella oneidensis MR-1 SO1342 rpoE RNA polymerase sigma-24 factor (NCBI ptt file) no data 34 89
o Pseudomonas stutzeri RCH2 Psest_3456 RNA polymerase sigma factor, sigma-70 family insig. 35 89
  Shewanella amazonensis SB2B Sama_2611 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 33 90
  Marinobacter adhaerens HP15 HP15_775 RNA polymerase sigma-70 RpoE type insig. 33 92
  Paraburkholderia sabiae LMG 24235 QEN71_RS04575 RNA polymerase sigma factor RpoE strong 33 89
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11965 RNA polymerase subunit sigma insig. 32 83
  Burkholderia phytofirmans PsJN BPHYT_RS14405 RNA polymerase sigma factor RpoE no data 33 89
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04355 RNA polymerase, sigma-24 subunit, RpoE no data 33 89
  Paraburkholderia graminis OAS925 ABIE53_003043 RNA polymerase sigma-70 factor (ECF subfamily) strong 33 89
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3681.1 RNA polymerase sigma factor RpoE insig. 34 91
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS05140 rpoE RNA polymerase sigma factor RpoE no data 32 89
  Erwinia tracheiphila SCR3 LU632_RS15425 rpoE RNA polymerase sigma factor RpoE strong 31 89
  Pantoea sp. MT58 IAI47_04850 RNA polymerase sigma factor RpoE no data 32 89
  Pseudomonas aeruginosa MRSN321 DY961_RS08690 rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma RNA polymerase sigma factor RpoE strong 32 97
  Pseudomonas aeruginosa PA14 IKLFDK_03265 alginate biosynthesis protein AlgZ/FimS strong 32 97
  Pseudomonas aeruginosa PUPa3 DQ20_RS44160 rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma RNA polymerase sigma factor RpoE strong 32 97
  Kangiella aquimarina DSM 16071 B158DRAFT_2180 RNA polymerase, sigma-24 subunit, RpoE strong 29 95
  Escherichia coli BL21 ECD_02467 RNA polymerase sigma E factor no data 32 89
  Escherichia fergusonii Becca EFB2_01323 ECF RNA polymerase sigma-E factor no data 32 89
  Escherichia coli ECOR27 NOLOHH_13050 rpoE RNA polymerase sigma factor RpoE no data 32 89
  Escherichia coli ECOR38 HEPCGN_20520 rpoE RNA polymerase sigma factor RpoE no data 32 89
  Escherichia coli ECRC100 OKFHMN_21375 rpoE RNA polymerase sigma factor RpoE no data 32 89
  Escherichia coli ECRC101 MCAODC_11905 rpoE RNA polymerase sigma factor RpoE no data 32 89
  Escherichia coli ECRC102 NIAGMN_19145 rpoE RNA polymerase sigma factor RpoE no data 32 89
  Escherichia coli ECRC62 BNILDI_11850 rpoE RNA polymerase sigma factor RpoE no data 32 89
  Escherichia coli ECRC98 JDDGAC_25040 rpoE RNA polymerase sigma factor RpoE no data 32 89
  Escherichia coli ECRC99 KEDOAH_06845 rpoE RNA polymerase sigma factor RpoE no data 32 89
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01134 ECF RNA polymerase sigma-E factor no data 32 89
  Escherichia coli Nissle 1917 ECOLIN_RS14560 RNA polymerase sigma factor RpoE no data 32 89
  Escherichia coli BW25113 b2573 rpoE RNA polymerase, sigma 24 (sigma E) factor (NCBI) no data 32 89
  Pseudomonas stutzeri RCH2 Psest_3100 RNA polymerase sigma factor RpoE strong 32 91
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_01235 rpoE RNA polymerase sigma factor RpoE strong 31 89
  Cupriavidus basilensis FW507-4G11 RR42_RS14080 RNA polymerase sigma factor RpoE strong 31 93
  Pseudomonas segetis P6 ACVTMO_RS06940 rpoE RNA polymerase sigma factor RpoE strong 33 97
  Enterobacter asburiae PDN3 EX28DRAFT_0072 RNA polymerase sigma factor RpoE no data 32 89
  Enterobacter sp. TBS_079 MPMX20_03444 ECF RNA polymerase sigma-E factor no data 32 89
  Klebsiella michiganensis M5al BWI76_RS21355 RNA polymerase sigma factor RpoE no data 32 89
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2107 RNA polymerase sigma factor RpoE no data 32 89
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14445 RNA polymerase sigma factor RpoE strong 31 93
  Ralstonia solanacearum GMI1000 RS_RS05225 RNA polymerase sigma factor RpoE strong 31 93
  Ralstonia solanacearum PSI07 RPSI07_RS19015 RNA polymerase sigma factor RpoE strong 31 93
  Ralstonia solanacearum UW163 UW163_RS11910 RNA polymerase sigma factor RpoE insig. 31 93
  Klebsiella pneumoniae MKP103 KDGMDA_28480 RNA polymerase sigma factor RpoE no data 32 89
  Klebsiella pneumoniae MRSN742743 KFA93_RS04695 rpoE;go_function=DNA RNA polymerase sigma factor RpoE no data 32 89
  Erwinia amylovora T8 OLJFJH_10215 RNA polymerase sigma factor RpoE strong 31 89
  Shewanella sp. ANA-3 Shewana3_0763 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 28 90
  Pseudomonas sp. S08-1 OH686_20045 RNA polymerase sigma factor RpoE strong 31 96
  Herbaspirillum seropedicae SmR1 HSERO_RS09625 RNA polymerase sigma factor RpoE no data 33 89
  Shewanella amazonensis SB2B Sama_0874 RNA polymerase sigma factor RpoE (RefSeq) strong 34 89
  Pseudomonas fluorescens SBW25 PFLU_RS07230 RNA polymerase sigma factor RpoE sig. 32 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07230 RNA polymerase sigma factor RpoE strong 32 97
  Pseudomonas sp. DMC3 GFF2277 RNA polymerase sigma-H factor cofit 32 97
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01572 RNA polymerase sigma-H factor cofit 32 97
  Pseudomonas sp. RS175 PFR28_00690 RNA polymerase sigma-H factor strong 32 97
  Pseudomonas orientalis W4I3 QF045_RS09835 RNA polymerase sigma factor RpoE cofit 32 97
  Pseudomonas simiae WCS417 PS417_07120 RNA polymerase sigma-H factor strong 32 97
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4516 RNA polymerase sigma-H factor AlgT sig. 32 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3323 RNA polymerase sigma-H factor AlgT no data 32 97
  Pseudomonas fluorescens FW300-N2E3 AO353_17625 RNA polymerase subunit sigma strong 32 97
  Pseudomonas fluorescens FW300-N2C3 AO356_04575 RNA polymerase subunit sigma strong 32 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2756 RNA polymerase sigma-H factor AlgT strong 32 97
  Rahnella sp. WP5 EX31_RS21800 RNA polymerase sigma factor RpoE no data 31 89
  Serratia liquefaciens MT49 IAI46_19585 RNA polymerase sigma factor RpoE no data 31 89
  Ralstonia sp. UNC404CL21Col ABZR87_RS10165 RNA polymerase sigma factor RpoE strong 30 89
  Shewanella oneidensis MR-1 SO3840 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 27 90
  Pseudomonas protegens RBAN4 FABNJH_07555 algU alginate biosynthesis protein AlgZ/FimS insig. 32 97
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12920 RNA polymerase sigma-70 factor cofit 31 84
  Dechlorosoma suillum PS Dsui_2453 RNA polymerase sigma factor RpoE no data 32 91
  Dickeya dadantii 3937 DDA3937_RS15765 RNA polymerase sigma factor RpoE strong 31 89
  Shewanella oneidensis MR-1 SO3551 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 32 96
  Pseudomonas sp. SVBP6 COO64_RS16525 rpoE RNA polymerase sigma factor RpoE insig. 32 97
  Pseudomonas sp. BP01 JOY50_RS14665 rpoE RNA polymerase sigma factor RpoE insig. 31 97
  Pseudomonas putida KT2440 PP_1427 RNA polymerase sigma E factor sig. 31 97
  Shewanella sp. ANA-3 Shewana3_3152 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) cofit 31 96
  Bosea sp. OAE506 ABIE41_RS07610 sigma-70 family RNA polymerase sigma factor insig. 33 95
  Shewanella amazonensis SB2B Sama_1068 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 32 97
  Pectobacterium carotovorum WPP14 HER17_RS05780 RNA polymerase sigma factor RpoE no data 32 89
  Dickeya dianthicola 67-19 HGI48_RS15850 RNA polymerase sigma factor RpoE cofit 31 89
  Dickeya dianthicola ME23 DZA65_RS16930 RNA polymerase sigma factor RpoE strong 31 89
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01700 RNA polymerase sigma factor insig. 31 76
  Pseudomonas syringae pv. syringae B728a Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE strong 32 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE strong 32 97
  Mycobacterium tuberculosis H37Rv Rv1221 Alternative RNA polymerase sigma factor SigE insig. 32 97
  Lysobacter sp. OAE881 ABIE51_RS16295 sigma-70 family RNA polymerase sigma factor insig. 37 88
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2952 RNA polymerase sigma factor, sigma-70 family strong 36 89
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2666 RNA polymerase sigma-70 factor, ECF family insig. 37 86
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS19220 sigma-70 family RNA polymerase sigma factor insig. 33 94
  Bacteroides stercoris CC31F HMPREF1181_RS05860 sigma-70 family RNA polymerase sigma factor insig. 30 83
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15190 RNA polymerase sigma factor insig. 28 86
  Castellaniella sp019104865 MT123 ABCV34_RS08355 RNA polymerase sigma factor RpoE strong 30 87
  Cellulophaga baltica 18 M666_RS15960 RNA polymerase sigma factor insig. 28 89
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04580 sigma-70 family RNA polymerase sigma factor insig. 34 92
  Rhodanobacter denitrificans MT42 LRK55_RS05200 sigma-70 family RNA polymerase sigma factor insig. 34 92
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05425 sigma-70 family RNA polymerase sigma factor insig. 34 92
  Shewanella loihica PV-4 Shew_1231 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 32 90
  Azospirillum brasilense Sp245 AZOBR_RS10625 RNA polymerase sigma-70 factor insig. 39 74
  Alteromonas macleodii MIT1002 MIT1002_03807 Sigma-W factor insig. 27 93
  Methylophilus sp. DMC18 GFF2730 RNA polymerase sigma-H factor no data 30 89
  Rhodospirillum rubrum S1H Rru_A0722 Sigma-24 (FecI) (NCBI) insig. 35 90
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00075 RNA polymerase sigma factor cofit 30 87
  Herbaspirillum seropedicae SmR1 HSERO_RS12085 RNA polymerase sigma-E factor protein insig. 29 94
  Bacteroides thetaiotaomicron VPI-5482 BT4647 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 30 86
  Acidovorax sp. GW101-3H11 Ac3H11_1573 RNA polymerase sigma factor RpoE no data 31 90
  Sphingobium sp. HT1-2 GFF5201 sigma-24 (FecI-like) protein insig. 35 91
  Rhodopseudomonas palustris CGA009 TX73_009355 sigma-70 family RNA polymerase sigma factor insig. 32 93
  Azospirillum sp. SherDot2 MPMX19_01371 hypothetical protein insig. 40 74
  Bacteroides thetaiotaomicron VPI-5482 BT1817 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 27 91
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04360 sigma-70 family RNA polymerase sigma factor insig. 26 97
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19950 RNA polymerase subunit sigma-24 insig. 30 88
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3981 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 27 94
  Sphingobium sp. HT1-2 GFF5350 sigma-24 (FecI-like) protein insig. 35 89
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS00160 hypothetical protein insig. 28 92
  Phocaeicola dorei CL03T12C01 ABI39_RS11710 RNA polymerase sigma factor insig. 28 89
  Agrobacterium fabrum C58 Atu0474 putative RNA polymerase sigma-70 factor insig. 31 90
  Bacteroides ovatus ATCC 8483 BACOVA_05165 Sigma-70 region 2 insig. 30 75
  Mycobacterium tuberculosis H37Rv Rv0182c Probable alternative RNA polymerase sigma factor SigG (RNA polymerase ECF type sigma factor) insig. 34 91
  Variovorax sp. OAS795 ABID97_RS08330 RNA polymerase sigma factor RpoE strong 30 89
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16945 RNA polymerase sigma factor sig. 30 78
  Alteromonas macleodii MIT1002 MIT1002_00882 Sigma-W factor insig. 28 94
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4205 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 29 87
  Bacteroides ovatus ATCC 8483 BACOVA_05461 Sigma-70 region 2 cofit 26 90
  Phocaeicola dorei CL03T12C01 ABI39_RS12855 RNA polymerase sigma factor insig. 30 78
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS15730 RNA polymerase sigma factor sig. 27 85
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19605 RNA polymerase insig. 30 84
  Bacteroides thetaiotaomicron VPI-5482 BT4347 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 30 75
  Sinorhizobium meliloti 1021 SMa0143 RNA polymerase ECF sigma factor insig. 34 80
  Sinorhizobium meliloti 1021 SM_b20592 RNA polymerase sigma factor insig. 33 86
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03310 RNA polymerase sigma factor insig. 38 85
  Rhodopseudomonas palustris CGA009 TX73_024905 sigma-70 family RNA polymerase sigma factor insig. 32 91
  Sphingobium sp. HT1-2 GFF4975 RNA polymerase ECF-type sigma factor cofit 35 74
  Sphingobium sp. HT1-2 GFF5151 RNA polymerase ECF-type sigma factor cofit 33 80
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3339 RNA polymerase sigma factor RpoE cofit 32 87
  Variovorax sp. SCN45 GFF3863 RNA polymerase sigma factor RpoE insig. 31 89
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15905 RNA polymerase sigma factor cofit 26 91
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2617 RNA polymerase sigma factor, sigma-70 family insig. 33 90
  Bacteroides stercoris CC31F HMPREF1181_RS04900 RNA polymerase sigma-70 factor insig. 31 90
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0443 RNA polymerase sigma factor, sigma-70 family insig. 30 91
  Caulobacter crescentus NA1000 CCNA_01032 RNA polymerase ECF-type sigma factor cofit 39 77
  Caulobacter crescentus NA1000 Δfur CCNA_01032 RNA polymerase ECF-type sigma factor cofit 39 77
  Kangiella aquimarina DSM 16071 B158DRAFT_2027 RNA polymerase sigma factor, sigma-70 family insig. 28 91
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05665 RNA polymerase sigma-70 factor insig. 26 93
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0865 RNA polymerase sigma factor, sigma-70 family insig. 25 90
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3853 RNA polymerase sigma factor, sigma-70 family insig. 35 76
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01538 RNA polymerase sigma-70 factor, ECF subfamily insig. 32 92
  Rhodopseudomonas palustris CGA009 TX73_002850 sigma-70 family RNA polymerase sigma factor insig. 32 94
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17775 hypothetical protein sig. 29 89
  Bacteroides ovatus ATCC 8483 BACOVA_00284 RNA polymerase sigma-70 factor insig. 28 93
  Pseudomonas protegens RBAN4 FABNJH_28815 sigK RNA polymerase sigma factor SigK insig. 31 90
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1840.1 FIG01210863: hypothetical protein insig. 32 84
  Pseudomonas fluorescens FW300-N2E3 AO353_07625 RNA polymerase subunit sigma-70 insig. 31 90
  Bacteroides thetaiotaomicron VPI-5482 BT3277 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 31 93
  Bacteroides ovatus ATCC 8483 BACOVA_05174 RNA polymerase sigma-70 factor insig. 29 90
  Bacteroides ovatus ATCC 8483 BACOVA_00397 Sigma-70 region 2 sig. 27 90
  Rhodanobacter sp. FW510-T8 OKGIIK_01380 rpoE RNA polymerase subunit sigma-24 insig. 37 70
  Rhodanobacter sp. FW510-T8 OKGIIK_13920 RNA polymerase subunit sigma insig. 32 91
  Castellaniella sp019104865 MT123 ABCV34_RS11175 sigma-70 family RNA polymerase sigma factor insig. 31 83
  Bacteroides thetaiotaomicron VPI-5482 BT3190 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 31 94
  Paraburkholderia graminis OAS925 ABIE53_005146 RNA polymerase sigma factor (sigma-70 family) sig. 32 88
  Ralstonia sp. UNC404CL21Col ABZR87_RS03700 RNA polymerase sigma factor insig. 35 95
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3837.1 RNA polymerase sigma-54 factor RpoN insig. 35 89
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18950 sigma-70 family RNA polymerase sigma factor insig. 32 84
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09420 RNA polymerase sigma factor sig. 32 84
  Pseudomonas segetis P6 ACVTMO_RS06730 sigma-70 family RNA polymerase sigma factor insig. 29 94
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16905 sigma-70 family RNA polymerase sigma factor insig. 25 94
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4578 RNA polymerase sigma factor, sigma-70 family insig. 23 85
  Bacteroides thetaiotaomicron VPI-5482 BT4571 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 24 94
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14775 sigma-70 family RNA polymerase sigma factor strong 35 76
  Paraburkholderia graminis OAS925 ABIE53_003943 RNA polymerase sigma-70 factor (ECF subfamily) sig. 34 73
  Synechocystis sp000284455 PCC 6803 SGL_RS08165 sigma-70 family RNA polymerase sigma factor strong 28 91
  Bacteroides thetaiotaomicron VPI-5482 BT2184 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 28 72
  Cellulophaga baltica 18 M666_RS05355 sigma-70 family RNA polymerase sigma factor insig. 25 88
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2774 RNA polymerase sigma factor, sigma-70 family insig. 28 74
  Azospirillum brasilense Sp245 AZOBR_RS26615 RNA polymerase insig. 41 66
  Mycobacterium tuberculosis H37Rv Rv3911 Possible alternative RNA polymerase sigma factor SigM insig. 34 77
  Ralstonia sp. UNC404CL21Col ABZR87_RS16160 sigma-70 family RNA polymerase sigma factor insig. 33 90
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07350 sigma-70 family RNA polymerase sigma factor insig. 25 85
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00665 RNA polymerase subunit sigma-24 strong 24 87
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04270 DNA-directed RNA polymerase sigma-70 factor insig. 33 88
  Ralstonia solanacearum UW163 UW163_RS09400 DNA-directed RNA polymerase sigma-70 factor insig. 33 88
  Pseudomonas sp. S08-1 OH686_05515 RNA polymerase sigma factor RpoE cofit 32 96
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1733 RNA polymerase sigma factor, sigma-70 family insig. 29 92
  Pseudomonas fluorescens SBW25 PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 29 90
  Pseudomonas fluorescens SBW25-INTG PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 29 90
  Variovorax sp. OAS795 ABID97_RS28845 RNA polymerase sigma factor insig. 34 97
  Lysobacter sp. OAE881 ABIE51_RS06950 RNA polymerase sigma factor strong 33 97
  Synechococcus elongatus PCC 7942 Synpcc7942_1923 sigG RNA polymerase sigma factor RpoE strong 32 88
  Phocaeicola dorei CL03T12C01 ABI39_RS10065 sigma-70 family RNA polymerase sigma factor insig. 26 89
  Sphingobium sp. HT1-2 GFF2317 RNA polymerase ECF-type sigma factor cofit 33 74
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13970 RNA polymerase sigma factor cofit 25 95
  Variovorax sp. OAS795 ABID97_RS21865 sigma-70 family RNA polymerase sigma factor insig. 31 90
  Bacteroides stercoris CC31F HMPREF1181_RS10020 RNA polymerase sigma-70 factor cofit 28 91
  Bacteroides stercoris CC31F HMPREF1181_RS11830 sigma-70 family RNA polymerase sigma factor insig. 28 79
  Cellulophaga baltica 18 M666_RS11420 RNA polymerase sigma factor insig. 27 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS18240 RNA polymerase sigma factor insig. 31 94
  Bacteroides stercoris CC31F HMPREF1181_RS04660 sigma-70 family RNA polymerase sigma factor insig. 25 91
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07040 RNA polymerase sigma factor insig. 34 91
  Bacteroides thetaiotaomicron VPI-5482 BT0188 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 32 78
  Bacteroides ovatus ATCC 8483 BACOVA_04399 Sigma-70 region 2 insig. 27 92
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14445 sigma-70 family RNA polymerase sigma factor insig. 26 89
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11895 hypothetical protein insig. 26 91
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12095 RNA polymerase subunit sigma-70 insig. 25 95
  Phocaeicola dorei CL03T12C01 ABI39_RS12815 sigma-70 family RNA polymerase sigma factor insig. 23 94
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3517 RNA polymerase sigma-70 factor insig. 36 93
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19085 RNA polymerase subunit sigma-24 insig. 28 89
  Cellulophaga baltica 18 M666_RS18230 RNA polymerase sigma factor insig. 25 78
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2891 RNA polymerase sigma factor, sigma-70 family insig. 25 96
  Cellulophaga baltica 18 M666_RS08305 RNA polymerase sigma factor insig. 24 88
  Sphingobium sp. HT1-2 GFF4485 RNA polymerase sigma factor cnrH cofit 31 88
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3492 RNA polymerase sigma factor, sigma-70 family strong 35 74
  Azospirillum sp. SherDot2 MPMX19_02022 ECF RNA polymerase sigma factor RpoE insig. 32 90
  Dinoroseobacter shibae DFL-12 Dshi_0366 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 30 97
  Bacteroides thetaiotaomicron VPI-5482 BT3993 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 28 84
  Bacteroides ovatus ATCC 8483 BACOVA_04866 RNA polymerase sigma-70 factor insig. 27 81