Homologs of CSW01_11335 from Vibrio cholerae E7946 ATCC 55056

23S rRNA pseudouridine(2604) synthase RluF
SEED: Ribosomal large subunit pseudouridine synthase F (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase F

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_11335 23S rRNA pseudouridine(2604) synthase RluF insig. 100 100
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1010 pseudouridine synthase insig. 65 69
  Cellulophaga baltica 18 M666_RS18620 23S rRNA pseudouridine(2604) synthase RluF insig. 62 71
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08925 23S rRNA pseudouridine synthase F insig. 61 70
o Marinobacter adhaerens HP15 HP15_886 pseudouridine synthase family 1 protein insig. 50 92
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19110 23S rRNA pseudouridine synthase F insig. 60 70
  Alteromonas macleodii MIT1002 MIT1002_01776 Ribosomal large subunit pseudouridine synthase F insig. 58 72
  Enterobacter asburiae PDN3 EX28DRAFT_4322 pseudouridine synthase insig. 61 69
  Escherichia coli BL21 ECD_03894 23S rRNA pseudouridine(2604) synthase insig. 62 68
  Escherichia coli BW25113 b4022 yjbC 23S rRNA pseudouridine synthase (NCBI) sig. 62 68
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1362 Ribosomal large subunit pseudouridine synthase F (EC 4.2.1.70) insig. 60 70
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04027 23S rRNA pseudouridine(2604) synthase insig. 61 68
  Lysobacter sp. OAE881 ABIE51_RS12720 pseudouridine synthase insig. 58 66
  Escherichia fergusonii Becca EFB2_04580 Dual-specificity RNA pseudouridine synthase RluF insig. 61 68
  Escherichia coli ECRC100 OKFHMN_13190 rluF 23S rRNA pseudouridine(2604) synthase RluF cofit 61 68
  Escherichia coli ECRC101 MCAODC_03690 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 61 68
  Escherichia coli ECRC102 NIAGMN_10940 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 61 68
  Escherichia coli ECRC62 BNILDI_06155 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 61 68
  Escherichia coli ECRC98 JDDGAC_16815 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 61 68
  Escherichia coli ECRC99 KEDOAH_14970 rluF 23S rRNA pseudouridine(2604) synthase RluF no data 61 68
  Escherichia coli Nissle 1917 ECOLIN_RS23225 23S rRNA pseudouridine(2604) synthase RluF insig. 61 68
  Escherichia coli ECOR38 HEPCGN_11820 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 61 68
  Escherichia coli ECOR27 NOLOHH_05365 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 61 68
  Enterobacter sp. TBS_079 MPMX20_00237 Dual-specificity RNA pseudouridine synthase RluF insig. 60 69
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1843.1 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 56 67
  Klebsiella pneumoniae MKP103 KDGMDA_10215 23S rRNA pseudouridine(2604) synthase RluF insig. 59 70
  Klebsiella michiganensis M5al BWI76_RS01755 23S rRNA pseudouridine synthase F insig. 59 70
  Rhodanobacter sp. FW510-T8 OKGIIK_16610 Pseudouridine synthase insig. 56 66
  Pantoea sp. MT58 IAI47_19435 23S rRNA pseudouridine(2604) synthase RluF insig. 58 70
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS07735 23S rRNA pseudouridine(2604) synthase RluF cofit 58 70
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16400 pseudouridine synthase cofit 55 66
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_08325 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 52 81
  Erwinia amylovora T8 OLJFJH_05535 23S rRNA pseudouridine(2604) synthase RluF sig. 58 68
o Erwinia tracheiphila SCR3 LU632_RS22175 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 52 81
  Serratia liquefaciens MT49 IAI46_21130 23S rRNA pseudouridine(2604) synthase RluF insig. 56 70
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07025 pseudouridine synthase insig. 55 66
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01375 pseudouridine synthase insig. 54 66
  Rhodanobacter denitrificans MT42 LRK55_RS06765 pseudouridine synthase insig. 54 66
  Rahnella sp. WP5 EX31_RS06075 23S rRNA pseudouridine(2604) synthase RluF insig. 53 79
  Serratia liquefaciens MT49 IAI46_19150 23S rRNA pseudouridine(2604) synthase RluF insig. 55 70
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08930 hypothetical protein insig. 46 66
  Shewanella sp. ANA-3 Shewana3_0916 pseudouridine synthase, Rsu (RefSeq) insig. 42 66
  Shewanella loihica PV-4 Shew_3180 pseudouridine synthase (RefSeq) insig. 39 66
  Fusobacterium nucleatum SB010 HUW76_04625 rRNA pseudouridine synthase cofit 39 66
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11165 pseudouridine synthase no data 37 68
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17510 pseudouridylate synthase strong 39 66
  Phocaeicola dorei CL03T12C01 ABI39_RS08040 pseudouridine synthase no data 40 69
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00420 pseudouridine synthase no data 40 69
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0719 pseudouridine synthase no data 37 69
  Shewanella amazonensis SB2B Sama_2937 pseudouridine synthase, Rsu (RefSeq) insig. 33 66
  Bacteroides thetaiotaomicron VPI-5482 BT3872 ribosomal large subunit pseudouridine synthase B (NCBI ptt file) no data 38 66
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS25065 pseudouridylate synthase no data 38 67
  Bacteroides stercoris CC31F HMPREF1181_RS07005 pseudouridine synthase no data 37 65
  Methylophilus sp. DMC18 GFF2067 hypothetical protein insig. 37 64
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18660 pseudouridine synthase no data 35 72
  Burkholderia phytofirmans PsJN BPHYT_RS12155 RNA-binding protein S4 insig. 34 64
  Acidovorax sp. GW101-3H11 Ac3H11_4641 tRNA pseudouridine synthase A (EC 4.2.1.70) sig. 34 65
  Dechlorosoma suillum PS Dsui_2759 pseudouridine synthase family protein insig. 34 64
  Variovorax sp. OAS795 ABID97_RS00980 pseudouridine synthase strong 33 66
  Synechococcus elongatus PCC 7942 Synpcc7942_1010 ribosomal large subunit pseudouridine synthase B strong 36 68
  Paraburkholderia graminis OAS925 ABIE53_002509 23S rRNA pseudouridine2604 synthase insig. 33 67
  Variovorax sp. SCN45 GFF3530 Pseudouridine synthase insig. 34 64
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07850 pseudouridine synthase insig. 34 66
  Castellaniella sp019104865 MT123 ABCV34_RS03070 pseudouridine synthase insig. 32 64
  Desulfovibrio vulgaris Miyazaki F DvMF_0369 pseudouridine synthase (RefSeq) sig. 38 67
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00606 23S rRNA pseudouridine2604 synthase insig. 34 63
  Shewanella loihica PV-4 Shew_2975 pseudouridine synthase (RefSeq) insig. 32 66
  Cellulophaga baltica 18 M666_RS02705 pseudouridine synthase no data 35 66
  Pseudomonas sp. BP01 JOY50_RS01055 rluB 23S rRNA pseudouridine(2605) synthase RluB insig. 32 68
  Pseudomonas putida KT2440 PP_4496 23S rRNA pseudouridine 2605 synthase no data 32 68
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF343 tRNA pseudouridine synthase A (EC 4.2.1.70) cofit 32 65
  Ralstonia solanacearum PSI07 RPSI07_RS17115 16S rRNA uridine-516 pseudouridylate synthase cofit 34 64
  Cupriavidus basilensis FW507-4G11 RR42_RS11890 16S rRNA pseudouridylate synthase insig. 34 64
  Pseudomonas sp. RS175 PFR28_03314 hypothetical protein no data 30 93
  Pseudomonas sp. SVBP6 COO64_RS21735 rluB 23S rRNA pseudouridine(2605) synthase RluB sig. 32 67
  Pseudomonas simiae WCS417 PS417_22250 pseudouridine synthase sig. 32 67
  Herbaspirillum seropedicae SmR1 HSERO_RS10860 RNA pseudouridylate synthase insig. 35 65
  Pseudomonas fluorescens FW300-N2C3 AO356_18515 pseudouridine synthase insig. 33 67
  Pseudomonas fluorescens SBW25 PFLU_RS23890 pseudouridine synthase cofit 32 67
  Pseudomonas fluorescens SBW25-INTG PFLU_RS23890 pseudouridine synthase sig. 32 67
  Pseudomonas sp. DMC3 GFF2404 hypothetical protein insig. 32 67
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04587 hypothetical protein cofit 32 67
  Burkholderia phytofirmans PsJN BPHYT_RS08050 pseudouridine synthase no data 31 69
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS00360 16S rRNA pseudouridylate synthase sig. 33 64
  Ralstonia solanacearum UW163 UW163_RS13690 16S rRNA pseudouridylate synthase insig. 33 64
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5629 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) insig. 33 67
  Paraburkholderia sabiae LMG 24235 QEN71_RS06405 pseudouridine synthase cofit 34 70
  Ralstonia solanacearum GMI1000 RS_RS07030 16S rRNA uridine-516 pseudouridylate synthase sig. 33 64
  Pseudomonas sp. S08-1 OH686_20820 LSU rRNA pseudouridine(2605) synthase cofit 32 66
  Pseudomonas fluorescens FW300-N2E3 AO353_18540 pseudouridine synthase strong 32 67
  Pseudomonas segetis P6 MPMX49_02908 hypothetical protein insig. 32 66
  Pseudomonas stutzeri RCH2 Psest_1999 pseudouridine synthase insig. 33 66
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05101 ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) no data 30 69
  Paraburkholderia graminis OAS925 ABIE53_001827 23S rRNA pseudouridine2605 synthase no data 30 69
  Magnetospirillum magneticum AMB-1 AMB_RS12445 rRNA pseudouridine synthase insig. 33 66
  Ralstonia sp. UNC404CL21Col ABZR87_RS11810 pseudouridine synthase insig. 35 64
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4401 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) insig. 31 67
  Rhodanobacter denitrificans MT42 LRK55_RS00435 pseudouridine synthase cofit 30 67
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3555 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) no data 32 67
  Dechlorosoma suillum PS Dsui_2725 pseudouridine synthase family protein no data 31 66