Conservation of cofitness between QEN71_RS17655 and QEN71_RS17645 in Paraburkholderia sabiae LMG 24235

101 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS17655 tryptophan synthase subunit alpha 1.0 QEN71_RS17645 tryptophan synthase subunit beta 0.97 5
Paraburkholderia graminis OAS925 0.88 ABIE53_004811 tryptophan synthase alpha chain 0.96 ABIE53_004809 tryptophan synthase beta chain
Paraburkholderia bryophila 376MFSha3.1 0.86 H281DRAFT_06065 tryptophan synthase, alpha chain 0.95 H281DRAFT_06067 tryptophan synthase, beta chain 0.57 4
Burkholderia phytofirmans PsJN 0.84 BPHYT_RS33865 tryptophan synthase alpha chain 0.96 BPHYT_RS33875 tryptophan synthase subunit alpha 0.93 2
Ralstonia solanacearum GMI1000 0.71 RS_RS09955 tryptophan synthase subunit alpha 0.88 RS_RS09965 tryptophan synthase subunit beta 0.90 1
Ralstonia sp. UNC404CL21Col 0.71 ABZR87_RS14490 tryptophan synthase subunit alpha 0.88 ABZR87_RS14500 tryptophan synthase subunit beta 0.92 1
Ralstonia solanacearum PSI07 0.71 RPSI07_RS14740 tryptophan synthase subunit alpha 0.88 RPSI07_RS14730 tryptophan synthase subunit beta
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS02575 tryptophan synthase subunit alpha 0.88 RALBFv3_RS02585 tryptophan synthase subunit beta
Ralstonia solanacearum UW163 0.70 UW163_RS11150 tryptophan synthase subunit alpha 0.88 UW163_RS11140 tryptophan synthase subunit beta
Cupriavidus basilensis FW507-4G11 0.70 RR42_RS14350 tryptophan synthase alpha chain 0.90 RR42_RS14360 tryptophan synthase subunit alpha
Dechlorosoma suillum PS 0.63 Dsui_3191 tryptophan synthase, alpha subunit 0.86 Dsui_3192 tryptophan synthase, beta subunit
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS16470 tryptophan synthase subunit alpha 0.80 HSERO_RS16475 tryptophan synthase subunit alpha 0.67 8
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF3354 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.78 GFF3355 Tryptophan synthase beta chain (EC 4.2.1.20) 0.92 11
Variovorax sp. SCN45 0.57 GFF3882 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.77 GFF3883 Tryptophan synthase beta chain (EC 4.2.1.20)
Acidovorax sp. GW101-3H11 0.57 Ac3H11_1535 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.78 Ac3H11_1534 Tryptophan synthase beta chain (EC 4.2.1.20) 0.99 1
Variovorax sp. OAS795 0.56 ABID97_RS08425 tryptophan synthase subunit alpha 0.77 ABID97_RS08430 tryptophan synthase subunit beta 0.52 65
Marinobacter adhaerens HP15 0.56 HP15_1826 tryptophan synthase, alpha subunit 0.68 HP15_1827 tryptophan synthase, beta subunit
Castellaniella sp019104865 MT123 0.54 ABCV34_RS08430 tryptophan synthase subunit alpha 0.81 ABCV34_RS08435 tryptophan synthase subunit beta
Acinetobacter radioresistens SK82 0.50 MPMX26_02611 Tryptophan synthase alpha chain 0.72 MPMX26_02617 Tryptophan synthase beta chain
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS07995 tryptophan synthase subunit alpha 0.72 ABZR86_RS08000 tryptophan synthase subunit beta 0.91 19
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS01680 tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data) 0.70 LRK54_RS01685 tryptophan synthase subunit beta 0.93 1
Rhodanobacter denitrificans MT42 0.49 LRK55_RS01460 tryptophan synthase subunit alpha 0.70 LRK55_RS01465 tryptophan synthase subunit beta low > 63
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_04850 trpA tryptophan synthase subunit alpha 0.71 OKGIIK_04845 trpB tryptophan synthase subunit beta 0.57 19
Lysobacter sp. OAE881 0.48 ABIE51_RS08265 tryptophan synthase subunit alpha 0.71 ABIE51_RS08260 tryptophan synthase subunit beta 0.95 1
Dinoroseobacter shibae DFL-12 0.42 Dshi_0952 tryptophan synthase, alpha subunit (RefSeq) 0.66 Dshi_1031 tryptophan synthase, beta subunit (RefSeq)
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1967.1 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.70 Xcc-8004.1964.1 Tryptophan synthase beta chain (EC 4.2.1.20) 0.96 1
Pseudomonas stutzeri RCH2 0.42 Psest_0062 tryptophan synthase, alpha subunit 0.70 Psest_0063 tryptophan synthase, beta subunit 0.97 1
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_0033 tryptophan synthase, alpha chain 0.66 Psyr_0034 tryptophan synthase, beta chain 0.86 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_0033 tryptophan synthase, alpha chain 0.66 Psyr_0034 tryptophan synthase, beta chain 0.89 1
Pseudomonas putida KT2440 0.41 PP_0082 tryptophan synthase alpha chain 0.66 PP_0083 tryptophan synthase beta chain 0.95 1
Phaeobacter inhibens DSM 17395 0.41 PGA1_c04930 tryptophan synthase alpha chain 0.67 PGA1_c04870 tryptophan synthase beta chain
Pseudomonas sp. RS175 0.40 PFR28_04716 Tryptophan synthase alpha chain 0.69 PFR28_04715 Tryptophan synthase beta chain
Rhodospirillum rubrum S1H 0.40 Rru_A3428 Tryptophan synthase (NCBI) 0.67 Rru_A3427 Tryptophan synthase, beta chain (NCBI) 0.95 9
Bosea sp. OAE506 0.40 ABIE41_RS03930 tryptophan synthase subunit alpha 0.68 ABIE41_RS04270 tryptophan synthase subunit beta
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_10910 tryptophan synthase subunit alpha 0.69 AO356_10915 tryptophan synthase subunit beta 0.97 1
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_4047 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.69 Pf6N2E2_4048 Tryptophan synthase beta chain (EC 4.2.1.20) 0.93 6
Magnetospirillum magneticum AMB-1 0.40 AMB_RS20300 tryptophan synthase subunit alpha 0.68 AMB_RS20295 tryptophan synthase subunit beta
Pseudomonas fluorescens SBW25 0.40 PFLU_RS00175 tryptophan synthase subunit alpha 0.69 PFLU_RS00180 tryptophan synthase subunit beta low > 109
Sinorhizobium meliloti 1021 0.40 SMc02765 tryptophan synthase subunit alpha 0.65 SMc02766 tryptophan synthase subunit beta 0.99 1
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_10705 tryptophan synthase subunit alpha 0.69 AO353_10710 tryptophan synthase subunit beta 0.91 1
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS00175 tryptophan synthase subunit alpha 0.69 PFLU_RS00180 tryptophan synthase subunit beta 0.90 1
Pseudomonas simiae WCS417 0.40 PS417_00180 tryptophan synthase subunit alpha 0.69 PS417_00185 tryptophan synthase subunit beta 0.85 1
Pseudomonas sp. S08-1 0.39 OH686_12430 tryptophan synthase, alpha subunit 0.71 OH686_12425 tryptophan synthase, beta subunit 0.90 2
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_565 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.69 PfGW456L13_566 Tryptophan synthase beta chain (EC 4.2.1.20) 0.96 3
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_1830 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.69 Pf1N1B4_1831 Tryptophan synthase beta chain (EC 4.2.1.20) 0.96 1
Azospirillum brasilense Sp245 0.39 AZOBR_RS00520 tryptophan synthase subunit alpha 0.68 AZOBR_RS00525 tryptophan synthase subunit beta 0.91 2
Rhodopseudomonas palustris CGA009 0.39 TX73_000365 tryptophan synthase subunit alpha 0.68 TX73_000360 tryptophan synthase subunit beta
Synechococcus elongatus PCC 7942 0.38 Synpcc7942_0411 trpA tryptophan synthase subunit alpha 0.62 Synpcc7942_2143 trpB tryptophan synthase subunit beta
Azospirillum sp. SherDot2 0.38 MPMX19_02737 Tryptophan synthase alpha chain 0.67 MPMX19_02736 Tryptophan synthase beta chain 0.76 6
Agrobacterium fabrum C58 0.38 Atu0019 tryptophan synthase alpha subunit 0.65 Atu0018 tryptophan synthase beta subunit
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS11320 tryptophan synthase subunit alpha 0.63 A4249_RS11330 tryptophan synthase subunit beta
Rhizobium sp. OAE497 0.37 ABIE40_RS19340 tryptophan synthase subunit alpha 0.65 ABIE40_RS19335 tryptophan synthase subunit beta
Caulobacter crescentus NA1000 0.36 CCNA_03657 tryptophan synthase alpha chain 0.63 CCNA_03658 tryptophan synthase beta chain 0.96 3
Caulobacter crescentus NA1000 Δfur 0.36 CCNA_03657 tryptophan synthase alpha chain 0.63 CCNA_03658 tryptophan synthase beta chain low > 67
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_0239 tryptophan synthase, alpha chain (EC 4.2.1.20) 0.68 Ga0059261_0238 tryptophan synthase, beta subunit
Dickeya dianthicola ME23 0.32 DZA65_RS10940 tryptophan synthase subunit alpha 0.54 DZA65_RS10945 tryptophan synthase subunit beta 0.96 1
Dickeya dianthicola 67-19 0.32 HGI48_RS10460 tryptophan synthase subunit alpha 0.54 HGI48_RS10465 tryptophan synthase subunit beta 0.81 3
Serratia liquefaciens MT49 0.31 IAI46_14045 tryptophan synthase subunit alpha 0.53 IAI46_14040 tryptophan synthase subunit beta low > 86
Dickeya dadantii 3937 0.31 DDA3937_RS10460 tryptophan synthase subunit alpha 0.54 DDA3937_RS10465 tryptophan synthase subunit beta 0.95 1
Pantoea sp. MT58 0.31 IAI47_09165 tryptophan synthase subunit alpha 0.54 IAI47_09170 tryptophan synthase subunit beta 0.99 1
Shewanella sp. ANA-3 0.31 Shewana3_1515 trpA tryptophan synthase subunit alpha (RefSeq) 0.54 Shewana3_1516 tryptophan synthase subunit beta (RefSeq) 0.98 2
Shewanella oneidensis MR-1 0.30 SO3024 trpA tryptophan synthase, alpha subunit (NCBI ptt file) 0.54 SO3023 trpB tryptophan synthase, beta subunit (NCBI ptt file) 0.99 1
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF2726 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.54 GFF2725 Tryptophan synthase beta chain (EC 4.2.1.20) low > 78
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_05925 tryptophan synthase subunit alpha 0.54 CSW01_05930 tryptophan synthase subunit beta low > 62
Pectobacterium carotovorum WPP14 0.30 HER17_RS10940 tryptophan synthase subunit alpha 0.54 HER17_RS10935 tryptophan synthase subunit beta 0.98 9
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_1740 trpA tryptophan synthase subunit alpha (RefSeq) 0.58 DvMF_2237 tryptophan synthase subunit beta (RefSeq) low > 51
Enterobacter sp. TBS_079 0.30 MPMX20_02514 Tryptophan synthase alpha chain 0.54 MPMX20_02513 Tryptophan synthase beta chain 0.96 1
Desulfovibrio vulgaris Hildenborough JW710 0.30 DVU0471 trpA tryptophan synthase, alpha subunit (TIGR) 0.57 DVU0085 trpB-1 tryptophan synthase, beta subunit (TIGR) low > 55
Klebsiella michiganensis M5al 0.30 BWI76_RS11840 tryptophan synthase subunit alpha 0.54 BWI76_RS11845 tryptophan synthase subunit beta 0.93 1
Enterobacter asburiae PDN3 0.29 EX28DRAFT_0932 tryptophan synthase, alpha chain (EC 4.2.1.20) 0.54 EX28DRAFT_0933 tryptophan synthase, beta subunit 0.90 1
Escherichia coli Nissle 1917 0.29 ECOLIN_RS07595 tryptophan synthase subunit alpha 0.54 ECOLIN_RS07600 tryptophan synthase subunit beta
Escherichia coli HS(pFamp)R (ATCC 700891) 0.29 OHPLBJKB_02423 Tryptophan synthase alpha chain 0.54 OHPLBJKB_02422 Tryptophan synthase beta chain low > 73
Escherichia coli ECRC62 0.29 BNILDI_18480 trpA tryptophan synthase subunit alpha 0.54 BNILDI_18475 trpB tryptophan synthase subunit beta 0.97 3
Escherichia coli ECOR27 0.29 NOLOHH_20335 trpA tryptophan synthase subunit alpha 0.54 NOLOHH_20330 trpB tryptophan synthase subunit beta 0.93 5
Escherichia coli BW25113 0.29 b1260 trpA tryptophan synthase subunit alpha (NCBI) 0.54 b1261 trpB tryptophan synthase subunit beta (NCBI) 0.93 3
Escherichia coli BL21 0.29 ECD_01234 tryptophan synthase, alpha subunit 0.54 ECD_01235 tryptophan synthase, beta subunit low > 61
Escherichia coli ECOR38 0.28 HEPCGN_25515 trpA tryptophan synthase subunit alpha 0.54 HEPCGN_25520 trpB tryptophan synthase subunit beta 0.95 6
Escherichia fergusonii Becca 0.28 EFB2_02666 Tryptophan synthase alpha chain 0.54 EFB2_02665 Tryptophan synthase beta chain low > 86
Escherichia coli ECRC99 0.28 KEDOAH_26075 trpA tryptophan synthase subunit alpha 0.54 KEDOAH_26080 trpB tryptophan synthase subunit beta
Escherichia coli ECRC102 0.28 NIAGMN_26845 trpA tryptophan synthase subunit alpha 0.54 NIAGMN_26840 trpB tryptophan synthase subunit beta
Escherichia coli ECRC100 0.28 OKFHMN_02675 trpA tryptophan synthase subunit alpha 0.54 OKFHMN_02670 trpB tryptophan synthase subunit beta 0.84 48
Shewanella amazonensis SB2B 0.28 Sama_2134 trpA tryptophan synthase subunit alpha (RefSeq) 0.55 Sama_2133 tryptophan synthase subunit beta (RefSeq) 0.99 4
Escherichia coli ECRC101 0.28 MCAODC_15590 trpA tryptophan synthase subunit alpha 0.54 MCAODC_15595 trpB tryptophan synthase subunit beta 0.92 2
Escherichia coli ECRC98 0.28 JDDGAC_05220 trpA tryptophan synthase subunit alpha 0.54 JDDGAC_05215 trpB tryptophan synthase subunit beta 0.84 43
Erwinia tracheiphila SCR3 0.28 LU632_RS12775 trpA tryptophan synthase subunit alpha 0.54 LU632_RS12770 trpB tryptophan synthase subunit beta 0.69 2
Mucilaginibacter yixingensis YX-36 DSM 26809 0.28 ABZR88_RS10660 tryptophan synthase subunit alpha 0.56 ABZR88_RS10665 tryptophan synthase subunit beta
Rahnella sp. WP5 0.28 EX31_RS09980 tryptophan synthase subunit alpha 0.54 EX31_RS09975 tryptophan synthase subunit beta 0.98 2
Pedobacter sp. GW460-11-11-14-LB5 0.28 CA265_RS05025 tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data) 0.56 CA265_RS05020 tryptophan synthase subunit beta
Bacteroides thetaiotaomicron VPI-5482 0.28 BT0527 tryptophan synthase alpha chain (NCBI ptt file) 0.51 BT0533 tryptophan synthase beta chain (NCBI ptt file) 0.75 34
Echinicola vietnamensis KMM 6221, DSM 17526 0.28 Echvi_2511 tryptophan synthase, alpha subunit 0.55 Echvi_2510 tryptophan synthase, beta subunit
Alteromonas macleodii MIT1002 0.27 MIT1002_01425 Tryptophan synthase alpha chain 0.54 MIT1002_01426 Tryptophan synthase beta chain
Methanococcus maripaludis JJ 0.27 MMJJ_RS09195 tryptophan synthase subunit alpha 0.60 MMJJ_RS09190 tryptophan synthase subunit beta
Methanococcus maripaludis S2 0.27 MMP_RS05185 tryptophan synthase subunit alpha 0.60 MMP_RS05190 tryptophan synthase subunit beta
Bacteroides ovatus ATCC 8483 0.27 BACOVA_03785 tryptophan synthase, alpha subunit 0.50 BACOVA_03779 tryptophan synthase, beta subunit 0.96 12
Shewanella loihica PV-4 0.27 Shew_2256 trpA tryptophan synthase subunit alpha (RefSeq) 0.55 Shew_2255 tryptophan synthase subunit beta (RefSeq) 0.99 1
Parabacteroides merdae CL09T00C40 0.27 HMPREF1078_RS00120 tryptophan synthase subunit alpha 0.52 HMPREF1078_RS00150 tryptophan synthase subunit beta 0.98 4
Mycobacterium tuberculosis H37Rv 0.27 Rv1613 Probable tryptophan synthase, alpha subunit TrpA 0.62 Rv1612 Tryptophan synthase, beta subunit TrpB
Bacteroides stercoris CC31F 0.26 HMPREF1181_RS15350 tryptophan synthase subunit alpha 0.53 HMPREF1181_RS15320 tryptophan synthase subunit beta 0.95 4
Phocaeicola vulgatus CL09T03C04 0.26 HMPREF1058_RS07200 tryptophan synthase subunit alpha 0.51 HMPREF1058_RS07170 tryptophan synthase subunit beta 0.97 1
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS21075 tryptophan synthase subunit alpha 0.51 ABI39_RS21045 tryptophan synthase subunit beta 0.78 18
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_05085 tryptophan synthase subunit alpha 0.55 CA264_05080 tryptophan synthase subunit beta 0.93 1
Kangiella aquimarina DSM 16071 0.24 B158DRAFT_2430 tryptophan synthase, alpha chain (EC 4.2.1.20) 0.55 B158DRAFT_2429 tryptophan synthase, beta subunit 0.71 17

Not shown: 1 genomes with orthologs for QEN71_RS17655 only; 0 genomes with orthologs for QEN71_RS17645 only