Conservation of cofitness between PP_0293 and PP_1985 in Pseudomonas putida KT2440

101 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0293 Imidazole glycerol phosphate synthase subunit HisF 1.0 PP_1985 3-isopropylmalate dehydratase large subunit 0.80 15
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_3838 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.89 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_09795 imidazole glycerol phosphate synthase subunit HisF 0.89 AO356_21400 isopropylmalate isomerase 0.64 36
Pseudomonas sp. RS175 0.98 PFR28_04933 Imidazole glycerol phosphate synthase subunit HisF 0.89 PFR28_02824 3-isopropylmalate dehydratase large subunit 0.54 11
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_1623 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.90 Pf1N1B4_15 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Pseudomonas fluorescens SBW25 0.98 PFLU_RS01625 imidazole glycerol phosphate synthase subunit HisF 0.89 PFLU_RS20580 3-isopropylmalate dehydratase large subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS01625 imidazole glycerol phosphate synthase subunit HisF 0.89 PFLU_RS20580 3-isopropylmalate dehydratase large subunit 0.62 10
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_12090 imidazole glycerol phosphate synthase subunit HisF 0.89 AO353_20620 isopropylmalate isomerase 0.82 14
Pseudomonas simiae WCS417 0.97 PS417_01580 imidazole glycerol phosphate synthase 0.89 PS417_18600 isopropylmalate isomerase 0.75 17
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_358 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.90 PfGW456L13_3948 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.88 16
Pseudomonas syringae pv. syringae B728a ΔmexB 0.97 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF 0.87 Psyr_1983 3-isopropylmalate dehydratase, large subunit
Pseudomonas syringae pv. syringae B728a 0.97 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF 0.87 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.81 10
Pseudomonas stutzeri RCH2 0.92 Psest_0156 imidazoleglycerol phosphate synthase, cyclase subunit 0.88 Psest_2591 3-isopropylmalate dehydratase, large subunit
Pseudomonas sp. S08-1 0.92 OH686_14595 Imidazole glycerol phosphate synthase cyclase subunit 0.86 OH686_04480 3-isopropylmalate dehydratase large subunit 0.81 4
Marinobacter adhaerens HP15 0.82 HP15_3009 protein containing histidine biosynthesis, HisF domain 0.78 HP15_1834 protein containing 3-isopropylmalate dehydratase, large subunit region domain
Paraburkholderia bryophila 376MFSha3.1 0.77 H281DRAFT_05659 imidazole glycerol phosphate synthase subunit hisF 0.71 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit
Paraburkholderia graminis OAS925 0.77 ABIE53_003695 cyclase 0.71 ABIE53_004801 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
Burkholderia phytofirmans PsJN 0.77 BPHYT_RS17680 imidazole glycerol phosphate synthase subunit HisF 0.71 BPHYT_RS33915 isopropylmalate isomerase 0.86 19
Paraburkholderia sabiae LMG 24235 0.76 QEN71_RS27835 imidazole glycerol phosphate synthase subunit HisF 0.71 QEN71_RS17605 3-isopropylmalate dehydratase large subunit 0.83 44
Ralstonia solanacearum IBSBF1503 0.76 RALBFv3_RS06815 imidazole glycerol phosphate synthase subunit HisF 0.71 RALBFv3_RS02620 3-isopropylmalate dehydratase large subunit
Ralstonia solanacearum UW163 0.76 UW163_RS06800 imidazole glycerol phosphate synthase subunit HisF 0.71 UW163_RS11105 3-isopropylmalate dehydratase large subunit
Ralstonia solanacearum PSI07 0.76 RPSI07_RS10420 imidazole glycerol phosphate synthase subunit HisF 0.72 RPSI07_RS14695 3-isopropylmalate dehydratase large subunit
Ralstonia solanacearum GMI1000 0.76 RS_RS14760 imidazole glycerol phosphate synthase subunit HisF 0.72 RS_RS10000 3-isopropylmalate dehydratase large subunit
Cupriavidus basilensis FW507-4G11 0.75 RR42_RS18885 imidazole glycerol phosphate synthase 0.72 RR42_RS14400 isopropylmalate isomerase
Ralstonia sp. UNC404CL21Col 0.75 ABZR87_RS02470 imidazole glycerol phosphate synthase subunit HisF 0.72 ABZR87_RS14540 3-isopropylmalate dehydratase large subunit
Acinetobacter radioresistens SK82 0.75 MPMX26_02854 Imidazole glycerol phosphate synthase subunit HisF 0.72 MPMX26_00345 3-isopropylmalate dehydratase large subunit 0.90 20
Castellaniella sp019104865 MT123 0.73 ABCV34_RS11250 imidazole glycerol phosphate synthase subunit HisF 0.72 ABCV34_RS04290 3-isopropylmalate dehydratase large subunit low > 48
Dechlorosoma suillum PS 0.72 Dsui_1418 imidazoleglycerol phosphate synthase, cyclase subunit 0.66 Dsui_3201 3-isopropylmalate dehydratase, large subunit
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS20315 imidazole glycerol phosphate synthase 0.71 HSERO_RS16515 isopropylmalate isomerase 0.85 8
Hydrogenophaga sp. GW460-11-11-14-LB1 0.69 GFF1309 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.67 GFF3363 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Azospirillum brasilense Sp245 0.69 AZOBR_RS01685 imidazole glycerol phosphate synthase 0.66 AZOBR_RS03545 isopropylmalate isomerase 0.88 13
Variovorax sp. OAS795 0.69 ABID97_RS23105 imidazole glycerol phosphate synthase subunit HisF 0.69 ABID97_RS08465 3-isopropylmalate dehydratase large subunit
Azospirillum sp. SherDot2 0.68 MPMX19_02542 Imidazole glycerol phosphate synthase subunit HisF 0.66 MPMX19_01998 3-isopropylmalate dehydratase large subunit
Variovorax sp. SCN45 0.68 GFF5357 Imidazole glycerol phosphate synthase cyclase subunit 0.68 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Sinorhizobium meliloti 1021 0.67 SMc02569 imidazole glycerol phosphate synthase subunit HisF 0.65 SMc03823 isopropylmalate isomerase large subunit 0.88 25
Magnetospirillum magneticum AMB-1 0.66 AMB_RS22925 imidazole glycerol phosphate synthase cyclase subunit 0.63 AMB_RS20560 3-isopropylmalate dehydratase large subunit
Rhodospirillum rubrum S1H 0.65 Rru_A3594 Histidine biosynthesis protein HisF (NCBI) 0.66 Rru_A1189 3-isopropylmalate dehydratase large subunit region (NCBI) 0.83 11
Agrobacterium fabrum C58 0.64 Atu0039 imidazoleglycerol-phosphate synthase cyclase 0.64 Atu2709 3-isopropylmalate dehydratase, large subunit 0.77 21
Dinoroseobacter shibae DFL-12 0.64 Dshi_2576 imidazoleglycerol phosphate synthase, cyclase subunit (RefSeq) 0.59 Dshi_0085 3-isopropylmalate dehydratase, large subunit (RefSeq)
Acidovorax sp. GW101-3H11 0.63 Ac3H11_4733 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.67 Ac3H11_1525 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Rhizobium sp. OAE497 0.63 ABIE40_RS19440 imidazole glycerol phosphate synthase subunit HisF 0.63 ABIE40_RS18380 3-isopropylmalate dehydratase large subunit 0.94 19
Rhodopseudomonas palustris CGA009 0.62 TX73_001625 imidazole glycerol phosphate synthase subunit HisF 0.62 TX73_001245 3-isopropylmalate dehydratase large subunit
Bosea sp. OAE506 0.61 ABIE41_RS03810 imidazole glycerol phosphate synthase subunit HisF 0.63 ABIE41_RS11660 3-isopropylmalate dehydratase large subunit
Phaeobacter inhibens DSM 17395 0.61 PGA1_c09240 imidazole glycerol phosphate synthase subunit HisF 0.59 PGA1_c29780 3-isopropylmalate dehydratase large subunit
Sphingomonas koreensis DSMZ 15582 0.60 Ga0059261_1048 imidazoleglycerol phosphate synthase, cyclase subunit 0.58 Ga0059261_4223 3-isopropylmalate dehydratase, large subunit 0.98 17
Caulobacter crescentus NA1000 0.58 CCNA_03853 imidazole glycerol phosphate synthase, cyclase subunit 0.61 CCNA_00196 3-isopropylmalate dehydratase large subunit 0.96 14
Caulobacter crescentus NA1000 Δfur 0.58 CCNA_03853 imidazole glycerol phosphate synthase, cyclase subunit 0.61 CCNA_00196 3-isopropylmalate dehydratase large subunit low > 67
Methanococcus maripaludis JJ 0.57 MMJJ_RS05490 imidazole glycerol phosphate synthase subunit HisF 0.22 MMJJ_RS06750 homoaconitase large subunit low > 28
Methanococcus maripaludis S2 0.56 MMP_RS08865 imidazole glycerol phosphate synthase subunit HisF 0.22 MMP_RS07610 homoaconitase large subunit
Mycobacterium tuberculosis H37Rv 0.56 Rv1605 Probable cyclase HisF 0.56 Rv2988c Probable 3-isopropylmalate dehydratase (large subunit) LeuC (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI)
Desulfovibrio vulgaris Miyazaki F 0.55 DvMF_2304 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.20 DvMF_1792 3-isopropylmalate dehydratase large subunit (RefSeq) 0.95 10
Bifidobacterium breve UCC2003 0.55 BBR_RS16095 imidazole glycerol phosphate synthase subunit HisF 0.54 BBR_RS19630 3-isopropylmalate dehydratase large subunit low > 34
Pontibacter actiniarum KMM 6156, DSM 19842 0.54 CA264_05110 imidazole glycerol phosphate synthase cyclase subunit 0.52 CA264_09435 3-isopropylmalate dehydratase large subunit low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.53 DVU0286 hisF imidazoleglycerol phosphate synthase, cyclase subunit (TIGR) 0.20 DVU2982 leuC 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) (from data) 0.87 17
Synechococcus elongatus PCC 7942 0.53 Synpcc7942_2087 hisF imidazole glycerol phosphate synthase subunit HisF 0.46 Synpcc7942_1898 leuC isopropylmalate isomerase large subunit
Bacteroides ovatus ATCC 8483 0.52 BACOVA_00219 imidazoleglycerol phosphate synthase, cyclase subunit 0.49 BACOVA_04603 3-isopropylmalate dehydratase, large subunit 0.95 14
Echinicola vietnamensis KMM 6221, DSM 17526 0.52 Echvi_2516 imidazoleglycerol phosphate synthase, cyclase subunit 0.49 Echvi_2059 3-isopropylmalate dehydratase, large subunit 0.70 47
Phocaeicola vulgatus CL09T03C04 0.52 HMPREF1058_RS06175 imidazole glycerol phosphate synthase subunit HisF 0.50 HMPREF1058_RS14550 3-isopropylmalate dehydratase large subunit 0.75 42
Phocaeicola dorei CL03T12C01 0.52 ABI39_RS19930 imidazole glycerol phosphate synthase subunit HisF 0.50 ABI39_RS10200 3-isopropylmalate dehydratase large subunit 0.80 20
Bacteroides thetaiotaomicron VPI-5482 0.51 BT1378 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) 0.49 BT1860 3-isopropylmalate dehydratase large subunit (NCBI ptt file) 0.83 25
Bacteroides stercoris CC31F 0.51 HMPREF1181_RS11070 imidazole glycerol phosphate synthase subunit HisF 0.50 HMPREF1181_RS14145 3-isopropylmalate dehydratase large subunit 0.93 26
Parabacteroides merdae CL09T00C40 0.49 HMPREF1078_RS13565 imidazole glycerol phosphate synthase subunit HisF 0.50 HMPREF1078_RS16660 3-isopropylmalate dehydratase large subunit 0.94 40
Mucilaginibacter yixingensis YX-36 DSM 26809 0.48 ABZR88_RS06855 imidazole glycerol phosphate synthase subunit HisF 0.52 ABZR88_RS11595 3-isopropylmalate dehydratase large subunit
Kangiella aquimarina DSM 16071 0.46 B158DRAFT_2291 imidazoleglycerol phosphate synthase, cyclase subunit 0.76 B158DRAFT_1319 3-isopropylmalate dehydratase, large subunit low > 40
Lysobacter sp. OAE881 0.43 ABIE51_RS13300 imidazole glycerol phosphate synthase subunit HisF 0.48 ABIE51_RS17575 3-isopropylmalate dehydratase large subunit 0.87 26
Pectobacterium carotovorum WPP14 0.43 HER17_RS12255 imidazole glycerol phosphate synthase subunit HisF 0.61 HER17_RS03075 3-isopropylmalate dehydratase large subunit 0.97 20
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.2943.1 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.84 Xcc-8004.1049.1 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.89 12
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_05775 imidazole glycerol phosphate synthase cyclase subunit 0.58 CSW01_12605 3-isopropylmalate dehydratase large subunit 0.78 1
Rahnella sp. WP5 0.42 EX31_RS11465 imidazole glycerol phosphate synthase subunit HisF 0.62 EX31_RS03690 3-isopropylmalate dehydratase large subunit 0.98 5
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_01675 Imidazole glycerol phosphate synthase subunit HisF 0.61 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit low > 73
Escherichia coli Nissle 1917 0.42 ECOLIN_RS11970 imidazole glycerol phosphate synthase subunit HisF 0.61 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit low > 52
Escherichia coli BW25113 0.42 b2025 hisF imidazole glycerol phosphate synthase subunit HisF (NCBI) 0.61 b0072 leuC isopropylmalate isomerase large subunit (NCBI) 0.95 10
Escherichia coli ECRC101 0.42 OKFHMN_24490 hisF Imidazole glycerol phosphate synthase subunit HisF 0.61 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC98 0.42 JDDGAC_28600 hisF Imidazole glycerol phosphate synthase subunit HisF 0.61 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC101 0.42 MCAODC_20450 hisF Imidazole glycerol phosphate synthase subunit HisF 0.61 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC99 0.42 KEDOAH_03660 hisF Imidazole glycerol phosphate synthase subunit HisF 0.61 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia fergusonii Becca 0.42 EFB2_01831 Imidazole glycerol phosphate synthase subunit HisF 0.60 EFB2_03973 3-isopropylmalate dehydratase large subunit low > 86
Escherichia coli ECRC62 0.42 BNILDI_14715 hisF Imidazole glycerol phosphate synthase subunit HisF 0.61 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1
Pantoea sp. MT58 0.42 IAI47_07065 imidazole glycerol phosphate synthase subunit HisF 0.61 IAI47_16010 3-isopropylmalate dehydratase large subunit 0.98 13
Escherichia coli ECOR38 0.42 HEPCGN_03195 hisF Imidazole glycerol phosphate synthase subunit HisF 0.61 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 85
Escherichia coli ECOR27 0.42 NOLOHH_15805 hisF Imidazole glycerol phosphate synthase subunit HisF 0.61 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 57
Escherichia coli ECRC102 0.42 NIAGMN_22435 hisF Imidazole glycerol phosphate synthase subunit HisF 0.61 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1
Dickeya dadantii 3937 0.41 DDA3937_RS09710 imidazole glycerol phosphate synthase subunit HisF 0.60 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit low > 74
Enterobacter sp. TBS_079 0.41 MPMX20_03007 Imidazole glycerol phosphate synthase subunit HisF 0.61 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1 0.91 21
Escherichia coli BL21 0.41 ECD_01927 imidazole glycerol phosphate synthase, catalytic subunit with HisH 0.61 ECD_00074 3-isopropylmalate dehydratase large subunit
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF3907 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.61 GFF166 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 78
Serratia liquefaciens MT49 0.41 IAI46_08185 imidazole glycerol phosphate synthase subunit HisF 0.59 IAI46_03345 3-isopropylmalate dehydratase large subunit low > 86
Erwinia tracheiphila SCR3 0.41 LU632_RS08920 hisF imidazole glycerol phosphate synthase subunit HisF 0.56 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit 0.81 22
Dickeya dianthicola 67-19 0.41 HGI48_RS09720 imidazole glycerol phosphate synthase subunit HisF 0.60 HGI48_RS18065 3-isopropylmalate dehydratase large subunit
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0534 imidazoleglycerol phosphate synthase, cyclase subunit 0.61 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit 0.83 25
Dickeya dianthicola ME23 0.41 DZA65_RS10030 imidazole glycerol phosphate synthase subunit HisF 0.60 DZA65_RS19210 3-isopropylmalate dehydratase large subunit 0.76 31
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS10715 imidazole glycerol phosphate synthase subunit HisF 0.48 A4249_RS10005 3-isopropylmalate dehydratase large subunit 0.99 12
Klebsiella michiganensis M5al 0.40 BWI76_RS18950 imidazole glycerol phosphate synthase cyclase subunit 0.60 BWI76_RS04670 3-isopropylmalate dehydratase large subunit 0.85 22
Alteromonas macleodii MIT1002 0.40 MIT1002_02638 Imidazole glycerol phosphate synthase subunit HisF 0.58 MIT1002_00947 3-isopropylmalate dehydratase large subunit 0.94 32
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS06705 imidazole glycerol phosphate synthase subunit HisF 0.48 ABZR86_RS15960 3-isopropylmalate dehydratase large subunit 0.90 46
Shewanella sp. ANA-3 0.39 Shewana3_1848 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.59 Shewana3_3759 isopropylmalate isomerase large subunit (RefSeq) 0.95 6
Shewanella oneidensis MR-1 0.39 SO2068 hisF hisF protein (cyclase) (NCBI ptt file) 0.59 SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) 0.97 16
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS01580 imidazole glycerol phosphate synthase subunit HisF 0.60 LRK54_RS07375 3-isopropylmalate dehydratase large subunit low > 59
Shewanella amazonensis SB2B 0.38 Sama_1947 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.59 Sama_0337 isopropylmalate isomerase large subunit (RefSeq) 0.93 25
Rhodanobacter denitrificans MT42 0.38 LRK55_RS01360 imidazole glycerol phosphate synthase subunit HisF 0.60 LRK55_RS07105 3-isopropylmalate dehydratase large subunit low > 63
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_04975 hisF imidazole glycerol phosphate synthase subunit HisF 0.47 OKGIIK_13585 leuC 3-isopropylmalate dehydratase large subunit low > 52
Shewanella loihica PV-4 0.36 Shew_2203 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.59 Shew_3470 isopropylmalate isomerase large subunit (RefSeq) 0.98 2

Not shown: 0 genomes with orthologs for PP_0293 only; 1 genomes with orthologs for PP_1985 only