Conservation of cofitness between PP_4680 and PP_0966 in Pseudomonas putida KT2440

100 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4680 acetohydroxybutanoate synthase / acetolactate synthase 1.0 PP_0966 Histidinol dehydrogenase 0.94 4
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_0846 acetolactate synthase, large subunit 0.89 Psyr_4133 histidinol dehydrogenase 0.91 2
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_0846 acetolactate synthase, large subunit 0.89 Psyr_4133 histidinol dehydrogenase 0.94 6
Pseudomonas sp. RS175 0.90 PFR28_03699 Acetolactate synthase isozyme 3 large subunit 0.90 PFR28_00187 Histidinol dehydrogenase 0.72 8
Pseudomonas simiae WCS417 0.89 PS417_23810 acetolactate synthase 3 catalytic subunit 0.91 PS417_04420 histidinol dehydrogenase 0.92 8
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_16170 acetolactate synthase 3 catalytic subunit 0.90 AO356_06965 histidinol dehydrogenase 0.90 25
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_14495 acetolactate synthase 3 catalytic subunit 0.92 AO353_05110 histidinol dehydrogenase 0.82 27
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_5175 Acetolactate synthase large subunit (EC 2.2.1.6) 0.90 Pf6N2E2_3252 Histidinol dehydrogenase (EC 1.1.1.23) 0.78 32
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS25650 acetolactate synthase 3 large subunit 0.92 PFLU_RS04470 histidinol dehydrogenase — —
Pseudomonas fluorescens SBW25 0.89 PFLU_RS25650 acetolactate synthase 3 large subunit 0.92 PFLU_RS04470 histidinol dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_2878 Acetolactate synthase large subunit (EC 2.2.1.6) 0.92 Pf1N1B4_1066 Histidinol dehydrogenase (EC 1.1.1.23) — —
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_1538 Acetolactate synthase large subunit (EC 2.2.1.6) 0.91 PfGW456L13_5000 Histidinol dehydrogenase (EC 1.1.1.23) 0.92 23
Pseudomonas stutzeri RCH2 0.88 Psest_1036 acetolactate synthase, large subunit, biosynthetic type 0.85 Psest_3298 histidinol dehydrogenase — —
Pseudomonas sp. S08-1 0.88 OH686_08130 acetolactate synthase, large subunit, biosynthetic type 0.85 OH686_08470 Histidinol dehydrogenase 0.85 17
Marinobacter adhaerens HP15 0.75 HP15_531 acetolactate synthase, large subunit, biosynthetic type 0.70 HP15_2428 histidinol dehydrogenase 0.84 17
Acinetobacter radioresistens SK82 0.70 MPMX26_00472 Acetolactate synthase isozyme 3 large subunit 0.57 MPMX26_02587 Histidinol dehydrogenase 0.88 24
Shewanella amazonensis SB2B 0.70 Sama_2018 acetolactate synthase 3 catalytic subunit (RefSeq) 0.33 Sama_1942 hisD histidinol dehydrogenase (RefSeq) 0.64 51
Shewanella oneidensis MR-1 0.70 SO2279 ilvI acetolactate synthase III, large subunit (NCBI ptt file) 0.32 SO2073 hisD histidinol dehydrogenase (NCBI ptt file) 0.75 19
Shewanella sp. ANA-3 0.69 Shewana3_2269 acetolactate synthase 3 catalytic subunit (RefSeq) 0.33 Shewana3_1853 hisD histidinol dehydrogenase (RefSeq) 0.82 22
Pectobacterium carotovorum WPP14 0.69 HER17_RS03095 acetolactate synthase 3 large subunit 0.31 HER17_RS12230 histidinol dehydrogenase 0.82 33
Rahnella sp. WP5 0.69 EX31_RS03665 acetolactate synthase 3 large subunit 0.32 EX31_RS11440 histidinol dehydrogenase 0.65 50
Serratia liquefaciens MT49 0.69 IAI46_03375 acetolactate synthase 3 large subunit 0.30 IAI46_08210 histidinol dehydrogenase low > 86
Dickeya dadantii 3937 0.69 DDA3937_RS18105 acetolactate synthase 3 large subunit 0.33 DDA3937_RS09735 histidinol dehydrogenase low > 74
Erwinia tracheiphila SCR3 0.68 LU632_RS02885 ilvI acetolactate synthase 3 large subunit 0.31 LU632_RS08945 hisD histidinol dehydrogenase low > 74
Dickeya dianthicola ME23 0.68 DZA65_RS19185 acetolactate synthase 3 large subunit 0.32 DZA65_RS10055 histidinol dehydrogenase low > 75
Dickeya dianthicola 67-19 0.68 HGI48_RS18040 acetolactate synthase 3 large subunit 0.32 HGI48_RS09745 histidinol dehydrogenase low > 71
Escherichia coli ECOR27 0.67 NOLOHH_03045 ilvI acetolactate synthase 3 large subunit 0.32 NOLOHH_15830 hisD Histidinol dehydrogenase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_03581 Acetolactate synthase isozyme 3 large subunit 0.32 OHPLBJKB_01680 Histidinol dehydrogenase low > 73
Pantoea sp. MT58 0.67 IAI47_15990 acetolactate synthase 3 large subunit 0.30 IAI47_07090 histidinol dehydrogenase 0.69 15
Escherichia coli BL21 0.67 ECD_00079 acetolactate synthase 3 large subunit 0.32 ECD_01922 bifunctional histidinal dehydrogenase/ histidinol dehydrogenase low > 60
Escherichia coli Nissle 1917 0.67 ECOLIN_RS00415 acetolactate synthase 3 large subunit 0.32 ECOLIN_RS11945 histidinol dehydrogenase — —
Escherichia coli ECRC62 0.67 BNILDI_08565 ilvI acetolactate synthase 3 large subunit 0.31 BNILDI_14740 hisD Histidinol dehydrogenase — —
Escherichia coli ECOR38 0.67 HEPCGN_08680 ilvI acetolactate synthase 3 large subunit 0.32 HEPCGN_03220 hisD Histidinol dehydrogenase low > 85
Escherichia fergusonii Becca 0.67 EFB2_03969 Acetolactate synthase isozyme 3 large subunit 0.32 EFB2_01836 Histidinol dehydrogenase low > 86
Escherichia coli BW25113 0.67 b0077 ilvI acetolactate synthase III large subunit (NCBI) 0.32 b2020 hisD histidinol dehydrogenase (NCBI) 0.78 3
Shewanella loihica PV-4 0.67 Shew_1776 acetolactate synthase 3 catalytic subunit (RefSeq) 0.33 Shew_2198 histidinol dehydrogenase (RefSeq) 0.67 44
Escherichia coli ECRC101 0.67 MCAODC_01215 ilvI acetolactate synthase 3 large subunit 0.32 MCAODC_20425 hisD Histidinol dehydrogenase — —
Escherichia coli ECRC101 0.67 OKFHMN_10700 ilvI acetolactate synthase 3 large subunit 0.32 OKFHMN_24515 hisD Histidinol dehydrogenase — —
Escherichia coli ECRC102 0.67 NIAGMN_08550 ilvI acetolactate synthase 3 large subunit 0.32 NIAGMN_22460 hisD Histidinol dehydrogenase — —
Escherichia coli ECRC98 0.67 JDDGAC_14295 ilvI acetolactate synthase 3 large subunit 0.32 JDDGAC_28625 hisD Histidinol dehydrogenase — —
Escherichia coli ECRC99 0.67 KEDOAH_17455 ilvI acetolactate synthase 3 large subunit 0.32 KEDOAH_03635 hisD Histidinol dehydrogenase — —
Enterobacter asburiae PDN3 0.66 EX28DRAFT_3673 acetolactate synthase, large subunit (EC 2.2.1.6) 0.31 EX28DRAFT_0539 histidinol dehydrogenase low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_00771 Acetolactate synthase isozyme 3 large subunit 0.31 MPMX20_03002 Histidinol dehydrogenase low > 85
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_12565 acetolactate synthase 3 large subunit 0.34 CSW01_05750 histidinol dehydrogenase low > 62
Alteromonas macleodii MIT1002 0.65 MIT1002_00503 Acetolactate synthase isozyme 3 large subunit 0.32 MIT1002_02633 Histidinol dehydrogenase 0.96 35
Klebsiella michiganensis M5al 0.65 BWI76_RS04695 acetolactate synthase 3 large subunit 0.31 BWI76_RS18925 histidinol dehydrogenase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF161 Acetolactate synthase large subunit (EC 2.2.1.6) 0.32 GFF3912 Histidinol dehydrogenase (EC 1.1.1.23) low > 78
Ralstonia solanacearum PSI07 0.62 RPSI07_RS14255 acetolactate synthase, large subunit, biosynthetic type 0.63 RPSI07_RS10390 histidinol dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS14955 acetolactate synthase 3 catalytic subunit 0.62 ABZR87_RS02500 histidinol dehydrogenase — —
Ralstonia solanacearum UW163 0.62 UW163_RS10675 acetolactate synthase 3 large subunit 0.62 UW163_RS06770 histidinol dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS03050 acetolactate synthase 3 large subunit 0.62 RALBFv3_RS06845 histidinol dehydrogenase — —
Ralstonia solanacearum GMI1000 0.62 RS_RS10420 acetolactate synthase 3 large subunit 0.62 RS_RS14790 histidinol dehydrogenase — —
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS05435 acetolactate synthase 3 catalytic subunit 0.66 RR42_RS18915 histidinol dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF4276 Acetolactate synthase large subunit (EC 2.2.1.6) 0.62 GFF1314 Histidinol dehydrogenase (EC 1.1.1.23) — —
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_04551 acetolactate synthase, large subunit 0.62 H281DRAFT_05652 histidinol dehydrogenase — —
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS06545 acetolactate synthase 0.63 BPHYT_RS17710 histidinol dehydrogenase — —
Dechlorosoma suillum PS 0.60 Dsui_3529 acetolactate synthase, large subunit, biosynthetic type 0.63 Dsui_1411 histidinol dehydrogenase — —
Paraburkholderia graminis OAS925 0.59 ABIE53_001574 acetolactate synthase-1/2/3 large subunit 0.62 ABIE53_003701 histidinol dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS08650 acetolactate synthase 0.63 HSERO_RS20345 histidinol dehydrogenase 0.89 22
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS24225 acetolactate synthase 3 catalytic subunit 0.62 QEN71_RS27865 histidinol dehydrogenase 0.89 36
Variovorax sp. SCN45 0.59 GFF1158 Acetolactate synthase large subunit (EC 2.2.1.6) 0.64 GFF5345 Histidinol dehydrogenase (EC 1.1.1.23) — —
Acidovorax sp. GW101-3H11 0.59 Ac3H11_525 Acetolactate synthase large subunit (EC 2.2.1.6) 0.63 Ac3H11_4724 Histidinol dehydrogenase (EC 1.1.1.23) — —
Castellaniella sp019104865 MT123 0.59 ABCV34_RS01210 acetolactate synthase 3 catalytic subunit 0.56 ABCV34_RS11230 histidinol dehydrogenase 0.87 7
Variovorax sp. OAS795 0.59 ABID97_RS14885 acetolactate synthase 3 catalytic subunit 0.64 ABID97_RS23160 histidinol dehydrogenase — —
Caulobacter crescentus NA1000 0.52 CCNA_02185 acetolactate synthase large subunit 0.38 CCNA_02431 histidinol dehydrogenase 0.95 10
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_02185 acetolactate synthase large subunit 0.38 CCNA_02431 histidinol dehydrogenase low > 67
Bosea sp. OAE506 0.51 ABIE41_RS12890 acetolactate synthase 3 large subunit 0.45 ABIE41_RS24015 histidinol dehydrogenase — —
Azospirillum sp. SherDot2 0.51 MPMX19_01776 Acetolactate synthase isozyme 3 large subunit 0.44 MPMX19_05543 Histidinol dehydrogenase — —
Desulfovibrio vulgaris Miyazaki F 0.51 DvMF_0153 acetolactate synthase, large subunit, biosynthetic type (RefSeq) 0.39 DvMF_2814 hisD histidinol dehydrogenase (RefSeq) 0.87 24
Desulfovibrio vulgaris Hildenborough JW710 0.50 DVU1376 ilvB-2 acetolactate synthase, large subunit, biosynthetic type (TIGR) 0.41 DVU0796 hisD histidinol dehydrogenase (TIGR) 0.76 43
Rhodospirillum rubrum S1H 0.49 Rru_A0467 Acetolactate synthase, large subunit, biosynthetic type (NCBI) 0.47 Rru_A2771 Histidinol dehydrogenase (NCBI) 0.54 50
Rhizobium sp. OAE497 0.49 ABIE40_RS11495 acetolactate synthase 3 large subunit 0.45 ABIE40_RS02725 histidinol dehydrogenase 0.93 12
Agrobacterium fabrum C58 0.49 Atu2036 acetolactate synthase III, large subunit 0.44 Atu0537 histidinol dehydrogenase 0.93 2
Sinorhizobium meliloti 1021 0.49 SMc01431 acetolactate synthase 3 catalytic subunit 0.47 SMc02307 histidinol dehydrogenase 0.88 56
Dinoroseobacter shibae DFL-12 0.49 Dshi_1779 acetolactate synthase, large subunit, biosynthetic type (RefSeq) 0.45 Dshi_0979 Histidinol dehydrogenase (RefSeq) — —
Magnetospirillum magneticum AMB-1 0.48 AMB_RS17740 acetolactate synthase 3 large subunit 0.46 AMB_RS16905 histidinol dehydrogenase — —
Rhodopseudomonas palustris CGA009 0.48 TX73_010465 acetolactate synthase 3 large subunit 0.43 TX73_023540 histidinol dehydrogenase — —
Sphingomonas koreensis DSMZ 15582 0.48 Ga0059261_0068 acetolactate synthase, large subunit (EC 2.2.1.6) 0.44 Ga0059261_1281 histidinol dehydrogenase 0.98 22
Phaeobacter inhibens DSM 17395 0.46 PGA1_c20210 acetolactate synthase isozyme 3 large subunit 0.46 PGA1_c31190 histidinol dehydrogenase HisD — —
Synechococcus elongatus PCC 7942 0.45 Synpcc7942_0139 ilvB acetolactate synthase 3 catalytic subunit 0.42 Synpcc7942_1519 hisD histidinol dehydrogenase — —
Mycobacterium tuberculosis H37Rv 0.44 Rv3003c Acetolactate synthase (large subunit) IlvB1 (acetohydroxy-acid synthase) 0.28 Rv1599 Probable histidinol dehydrogenase HisD (HDH) — —
Methanococcus maripaludis S2 0.39 MMP_RS03415 acetolactate synthase large subunit 0.35 MMP_RS05015 histidinol dehydrogenase — —
Methanococcus maripaludis JJ 0.39 MMJJ_RS01650 acetolactate synthase large subunit 0.35 MMJJ_RS00120 histidinol dehydrogenase — —
Bifidobacterium breve UCC2003 0.38 BBR_RS12350 acetolactate synthase large subunit 0.31 BBR_RS17055 histidinol dehydrogenase low > 34
Bacteroides stercoris CC31F 0.37 HMPREF1181_RS08330 biosynthetic-type acetolactate synthase large subunit 0.29 HMPREF1181_RS04860 histidinol dehydrogenase 0.84 40
Parabacteroides merdae CL09T00C40 0.37 HMPREF1078_RS16690 biosynthetic-type acetolactate synthase large subunit 0.31 HMPREF1078_RS02450 histidinol dehydrogenase low > 61
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS15805 acetolactate synthase, large subunit, biosynthetic type 0.33 CA265_RS03635 histidinol dehydrogenase 0.92 32
Pontibacter actiniarum KMM 6156, DSM 19842 0.37 CA264_06930 acetolactate synthase, large subunit, biosynthetic type 0.29 CA264_05030 histidinol dehydrogenase low > 74
Lysobacter sp. OAE881 0.37 ABIE51_RS17550 acetolactate synthase 2 catalytic subunit 0.32 ABIE51_RS13325 histidinol dehydrogenase 0.96 8
Bacteroides thetaiotaomicron VPI-5482 0.37 BT2077 acetolactate synthase large subunit (NCBI ptt file) 0.28 BT0201 histidinol dehydrogenase (NCBI ptt file) 0.93 13
Echinicola vietnamensis KMM 6221, DSM 17526 0.36 Echvi_2056 acetolactate synthase, large subunit, biosynthetic type 0.30 Echvi_2459 histidinol dehydrogenase 0.89 34
Bacteroides ovatus ATCC 8483 0.36 BACOVA_03303 acetolactate synthase, large subunit, biosynthetic type 0.28 BACOVA_01234 histidinol dehydrogenase 0.95 13
Mucilaginibacter yixingensis YX-36 DSM 26809 0.36 ABZR88_RS11580 biosynthetic-type acetolactate synthase large subunit 0.32 ABZR88_RS06880 histidinol dehydrogenase — —
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS16820 biosynthetic-type acetolactate synthase large subunit 0.29 HMPREF1058_RS15875 histidinol dehydrogenase 0.90 6
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS12720 biosynthetic-type acetolactate synthase large subunit 0.29 ABI39_RS11835 histidinol dehydrogenase 0.82 26
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS10020 acetolactate synthase 2 catalytic subunit 0.28 A4249_RS10695 histidinol dehydrogenase 0.99 5
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.1059.1 Acetolactate synthase large subunit (EC 2.2.1.6) 0.35 Xcc-8004.2948.1 Histidinol dehydrogenase (EC 1.1.1.23) 0.78 44
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS15935 biosynthetic-type acetolactate synthase large subunit 0.31 ABZR86_RS06730 histidinol dehydrogenase 0.98 5
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS10310 biosynthetic-type acetolactate synthase large subunit 0.31 LRK54_RS01605 histidinol dehydrogenase 0.72 31
Rhodanobacter denitrificans MT42 0.32 LRK55_RS09950 biosynthetic-type acetolactate synthase large subunit 0.31 LRK55_RS01385 histidinol dehydrogenase low > 63
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_13610 ilvB biosynthetic-type acetolactate synthase large subunit 0.32 OKGIIK_04950 hisD histidinol dehydrogenase low > 52

Not shown: 1 genomes with orthologs for PP_4680 only; 1 genomes with orthologs for PP_0966 only