Conservation of cofitness between CSW01_01015 and CSW01_09240 in Vibrio cholerae E7946 ATCC 55056

112 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01015 DNA helicase II 1.0 CSW01_09240 Holliday junction branch migration DNA helicase RuvB 0.80 8
Escherichia coli ECRC62 0.71 BNILDI_04995 uvrD DNA helicase II 0.79 BNILDI_15520 ruvB Holliday junction branch migration DNA helicase RuvB low > 75
Escherichia coli ECOR27 0.71 NOLOHH_06540 uvrD DNA helicase II 0.79 NOLOHH_16730 ruvB Holliday junction branch migration DNA helicase RuvB
Escherichia coli BW25113 0.71 b3813 uvrD DNA-dependent ATPase I and helicase II (NCBI) 0.79 b1860 ruvB Holliday junction DNA helicase B (NCBI) low > 76
Escherichia coli Nissle 1917 0.71 ECOLIN_RS21885 DNA helicase II 0.79 ECOLIN_RS10360 Holliday junction branch migration DNA helicase RuvB
Escherichia fergusonii Becca 0.71 EFB2_04824 DNA helicase II 0.79 EFB2_02082 Holliday junction ATP-dependent DNA helicase RuvB
Escherichia coli ECRC101 0.71 MCAODC_04915 uvrD DNA helicase II 0.79 MCAODC_19120 ruvB Holliday junction branch migration DNA helicase RuvB
Escherichia coli ECRC98 0.71 JDDGAC_18035 uvrD DNA helicase II 0.79 JDDGAC_00860 ruvB Holliday junction branch migration DNA helicase RuvB
Escherichia coli ECRC99 0.71 KEDOAH_13740 uvrD DNA helicase II 0.79 KEDOAH_01820 ruvB Holliday junction branch migration DNA helicase RuvB
Escherichia coli ECRC102 0.71 NIAGMN_12165 uvrD DNA helicase II 0.79 NIAGMN_01775 ruvB Holliday junction branch migration DNA helicase RuvB
Escherichia coli BL21 0.71 ECD_03689 DNA-dependent ATPase I and helicase II 0.79 ECD_01831 ATP-dependent DNA helicase, component of RuvABC resolvasome
Escherichia coli ECRC100 0.71 OKFHMN_14410 uvrD DNA helicase II 0.79 OKFHMN_26285 ruvB Holliday junction branch migration DNA helicase RuvB
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_04237 DNA helicase II 0.79 OHPLBJKB_01868 Holliday junction ATP-dependent DNA helicase RuvB
Klebsiella michiganensis M5al 0.71 BWI76_RS01220 DNA-dependent helicase II 0.80 BWI76_RS18145 Holliday junction branch migration DNA helicase RuvB
Serratia liquefaciens MT49 0.71 IAI46_00735 DNA helicase II 0.81 IAI46_14620 Holliday junction branch migration DNA helicase RuvB
Escherichia coli ECOR38 0.71 HEPCGN_13115 uvrD DNA helicase II 0.79 HEPCGN_04695 ruvB Holliday junction branch migration DNA helicase RuvB 0.76 11
Klebsiella pneumoniae MKP103 0.71 KDGMDA_09710 DNA helicase II 0.80 KDGMDA_25410 Holliday junction branch migration DNA helicase RuvB 0.63 17
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF241 ATP-dependent DNA helicase UvrD/PcrA 0.79 GFF1639 Holliday junction DNA helicase RuvB
Enterobacter sp. TBS_079 0.70 MPMX20_04463 DNA helicase II 0.80 MPMX20_02766 Holliday junction ATP-dependent DNA helicase RuvB low > 85
Enterobacter asburiae PDN3 0.70 EX28DRAFT_4482 ATP-dependent DNA helicase UvrD (EC 3.6.1.-) 0.79 EX28DRAFT_0696 Holliday junction DNA helicase subunit RuvB
Dickeya dadantii 3937 0.70 DDA3937_RS19880 DNA helicase II 0.81 DDA3937_RS10085 Holliday junction branch migration DNA helicase RuvB
Dickeya dianthicola ME23 0.70 DZA65_RS21080 DNA helicase II 0.81 DZA65_RS10530 Holliday junction branch migration DNA helicase RuvB
Dickeya dianthicola 67-19 0.70 HGI48_RS20035 DNA helicase II 0.81 HGI48_RS10115 Holliday junction branch migration DNA helicase RuvB
Pectobacterium carotovorum WPP14 0.70 HER17_RS01360 DNA helicase II 0.81 HER17_RS11840 Holliday junction branch migration DNA helicase RuvB low > 75
Pantoea sp. MT58 0.69 IAI47_18390 DNA helicase II 0.80 IAI47_08450 Holliday junction branch migration DNA helicase RuvB 0.43 12
Pantoea agglomerans CFBP13505 P0401 0.68 PagCFBP13505_RS15370 DNA helicase II 0.81 PagCFBP13505_RS02330 Holliday junction branch migration DNA helicase RuvB
Erwinia tracheiphila SCR3 0.68 LU632_RS24125 uvrD DNA helicase II 0.81 LU632_RS13410 ruvB Holliday junction branch migration DNA helicase RuvB
Erwinia tracheiphila HP pepo 2.2 0.68 IJEDHG_08770 uvrD DNA helicase II 0.81 IJEDHG_22140 ruvB Holliday junction branch migration DNA helicase RuvB
Rahnella sp. WP5 0.68 EX31_RS15175 DNA helicase II 0.82 EX31_RS11670 Holliday junction branch migration DNA helicase RuvB
Erwinia amylovora T8 0.68 OLJFJH_06425 DNA helicase II 0.81 OLJFJH_12860 Holliday junction branch migration DNA helicase RuvB
Shewanella sp. ANA-3 0.67 Shewana3_0469 uvrD DNA-dependent helicase II (RefSeq) 0.77 Shewana3_1957 ruvB Holliday junction DNA helicase RuvB (RefSeq)
Shewanella oneidensis MR-1 0.67 SO0467 uvrD DNA helicase II (NCBI ptt file) 0.77 SO2429 ruvB Holliday junction DNA helicase RuvB (NCBI ptt file) 0.44 22
Shewanella loihica PV-4 0.66 Shew_3385 uvrD DNA-dependent helicase II (RefSeq) 0.75 Shew_2075 ruvB Holliday junction DNA helicase B (RefSeq) low > 60
Shewanella amazonensis SB2B 0.66 Sama_0419 uvrD DNA-dependent helicase II (RefSeq) 0.76 Sama_1839 ruvB Holliday junction DNA helicase RuvB (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.65 MIT1002_00153 DNA helicase II 0.81 MIT1002_01333 Holliday junction ATP-dependent DNA helicase RuvB
Pseudomonas aeruginosa PA14 0.60 IKLFDK_26200 DNA helicase II 0.75 IKLFDK_04375 Holliday junction branch migration DNA helicase RuvB
Pseudomonas aeruginosa PUPa3 0.60 DQ20_RS57955 uvrD;go_function=DNA DNA helicase II 0.75 DQ20_RS45195 ruvB;go_function=DNA Holliday junction branch migration DNA helicase RuvB 0.37 95
Pseudomonas aeruginosa MRSN321 0.60 DY961_RS25505 uvrD;go_function=DNA DNA helicase II 0.75 DY961_RS07595 ruvB;go_function=DNA Holliday junction branch migration DNA helicase RuvB low > 100
Pseudomonas putida KT2440 0.60 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex 0.73 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB 0.46 6
Pseudomonas sp. BP01 0.60 JOY50_RS08735 uvrD DNA helicase II 0.73 JOY50_RS01815 ruvB Holliday junction branch migration DNA helicase RuvB low > 84
Pseudomonas sp. SVBP6 0.60 COO64_RS01845 uvrD DNA helicase II 0.74 COO64_RS20100 ruvB Holliday junction branch migration DNA helicase RuvB low > 93
Pseudomonas fluorescens SBW25 0.59 PFLU_RS29900 DNA helicase II 0.75 PFLU_RS24085 Holliday junction branch migration DNA helicase RuvB low > 109
Pseudomonas orientalis W4I3 0.59 QF045_RS02600 DNA helicase II 0.75 QF045_RS24610 Holliday junction branch migration DNA helicase RuvB low > 93
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS29900 DNA helicase II 0.75 PFLU_RS24085 Holliday junction branch migration DNA helicase RuvB low > 109
Pseudomonas lactucae CFBP13502 0.59 GEMAOFIL_00116 DNA helicase II 0.75 GEMAOFIL_04641 Holliday junction ATP-dependent DNA helicase RuvB low > 96
Pseudomonas sp. DMC3 0.59 GFF512 DNA helicase II 0.75 GFF5184 Holliday junction ATP-dependent DNA helicase RuvB low > 89
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_10055 DNA helicase II 0.75 AO353_03580 ATP-dependent DNA helicase RuvB 0.35 55
Pseudomonas sp. S08-1 0.59 OH686_13045 ATP-dependent DNA helicase UvrD/PcrA 0.75 OH686_19135 Holliday junction DNA helicase RuvB low > 80
Pseudomonas stutzeri RCH2 0.59 Psest_4098 Superfamily I DNA and RNA helicases 0.74 Psest_1497 Holliday junction DNA helicase, RuvB subunit
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_724 ATP-dependent DNA helicase UvrD/PcrA 0.75 PfGW456L13_1853 Holliday junction DNA helicase RuvB low > 87
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_2005 ATP-dependent DNA helicase UvrD/PcrA 0.75 Pf1N1B4_637 Holliday junction DNA helicase RuvB
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_4273 ATP-dependent DNA helicase UvrD/PcrA 0.74 Pf6N2E2_5537 Holliday junction DNA helicase RuvB
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_11990 DNA helicase II 0.74 AO356_18025 ATP-dependent DNA helicase RuvB 0.32 75
Pseudomonas sp. RS175 0.59 PFR28_04523 DNA helicase II 0.75 PFR28_03412 Holliday junction ATP-dependent DNA helicase RuvB 0.28 19
Kangiella aquimarina DSM 16071 0.58 B158DRAFT_0238 Superfamily I DNA and RNA helicases 0.77 B158DRAFT_1136 Holliday junction DNA helicase subunit RuvB low > 40
Pseudomonas segetis P6 0.58 ACVTMO_RS00885 uvrD DNA helicase II 0.74 ACVTMO_RS08360 ruvB Holliday junction branch migration DNA helicase RuvB 0.57 41
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_5065 ATP-dependent DNA helicase UvrD 0.75 Psyr_1410 Holliday junction DNA helicase RuvB 0.63 4
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_5065 ATP-dependent DNA helicase UvrD 0.75 Psyr_1410 Holliday junction DNA helicase RuvB 0.58 18
Marinobacter adhaerens HP15 0.56 HP15_3403 UvrD/REP helicase 0.75 HP15_2040 Holliday junction ATP-dependent DNA helicase RuvB
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_16775 DNA helicase 0.66 OKGIIK_01850 ruvB Holliday junction branch migration DNA helicase RuvB
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS16965 DNA helicase II 0.67 ABZR86_RS10830 Holliday junction branch migration DNA helicase RuvB 0.60 45
Lysobacter sp. OAE881 0.55 ABIE51_RS01985 DNA helicase II 0.68 ABIE51_RS05055 Holliday junction branch migration DNA helicase RuvB
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.5114.1 ATP-dependent DNA helicase UvrD/PcrA 0.68 Xcc-8004.1439.1 Holliday junction DNA helicase RuvB
Rhodanobacter denitrificans MT42 0.54 LRK55_RS06595 DNA helicase II 0.67 LRK55_RS04680 Holliday junction branch migration DNA helicase RuvB
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS06850 DNA helicase II 0.67 LRK54_RS04900 Holliday junction branch migration DNA helicase RuvB
Rhodanobacter sp000427505 FW510-R12 0.53 LRK53_RS01560 UvrD-helicase domain-containing protein 0.67 LRK53_RS05130 Holliday junction branch migration DNA helicase RuvB
Methylophilus sp. DMC18 0.48 GFF1664 DNA helicase II 0.74 GFF2327 Holliday junction ATP-dependent DNA helicase RuvB low > 43
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS13840 DNA-dependent helicase 0.72 BPHYT_RS16620 holliday junction ATP-dependent DNA helicase RuvB
Dechlorosoma suillum PS 0.45 Dsui_1227 DNA/RNA helicase, superfamily I 0.74 Dsui_0484 Holliday junction DNA helicase, RuvB subunit
Paraburkholderia graminis OAS925 0.45 ABIE53_002936 DNA helicase-2/ATP-dependent DNA helicase PcrA 0.72 ABIE53_003495 Holliday junction DNA helicase RuvB
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_04469 ATP-dependent DNA helicase UvrD 0.72 H281DRAFT_04255 Holliday junction DNA helicase subunit RuvB
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS05110 3'-5' exonuclease 0.73 QEN71_RS26800 Holliday junction branch migration DNA helicase RuvB
Acidovorax sp. GW101-3H11 0.44 Ac3H11_1660 ATP-dependent DNA helicase UvrD/PcrA 0.70 Ac3H11_4685 Holliday junction DNA helicase RuvB
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS15090 DNA helicase 0.73 RR42_RS02700 ATP-dependent DNA helicase RuvB
Variovorax sp. OAS795 0.44 ABID97_RS09150 UvrD-helicase domain-containing protein 0.69 ABID97_RS24875 Holliday junction branch migration DNA helicase RuvB
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS02160 DNA-dependent helicase 0.71 HSERO_RS02095 Holliday junction DNA helicase RuvB low > 78
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS15705 UvrD-helicase domain-containing protein 0.71 ABZR87_RS07620 Holliday junction branch migration DNA helicase RuvB 0.32 50
Variovorax sp. SCN45 0.43 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) 0.70 GFF2090 Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF5598 ATP-dependent DNA helicase UvrD/PcrA 0.70 GFF1665 Holliday junction DNA helicase RuvB
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS03775 DNA-dependent helicase 0.71 RALBFv3_RS11665 Holliday junction branch migration DNA helicase RuvB
Ralstonia solanacearum GMI1000 0.42 RS_RS11220 DNA-dependent helicase 0.71 RS_RS02485 Holliday junction branch migration DNA helicase RuvB
Ralstonia solanacearum UW163 0.42 UW163_RS09895 DNA-dependent helicase 0.71 UW163_RS01920 Holliday junction branch migration DNA helicase RuvB
Ralstonia solanacearum PSI07 0.42 RPSI07_RS13455 DNA-dependent helicase 0.71 RPSI07_RS21555 Holliday junction branch migration DNA helicase RuvB
Castellaniella sp019104865 MT123 0.42 ABCV34_RS05210 UvrD-helicase domain-containing protein 0.71 ABCV34_RS07990 Holliday junction branch migration DNA helicase RuvB
Sphingobium sp. HT1-2 0.36 GFF1640 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) 0.59 GFF1075 Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
Azospirillum brasilense Sp245 0.35 AZOBR_RS12445 DNA helicase II 0.59 AZOBR_RS09050 Holliday junction DNA helicase RuvB
Bosea sp. OAE506 0.35 ABIE41_RS12730 UvrD-helicase domain-containing protein 0.61 ABIE41_RS09480 Holliday junction branch migration DNA helicase RuvB
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_0249 Superfamily I DNA and RNA helicases 0.58 Ga0059261_0819 Holliday junction DNA helicase subunit RuvB
Phaeobacter inhibens DSM 17395 0.34 PGA1_c09450 DNA helicase II UvrD 0.58 PGA1_c05870 holliday junction ATP-dependent DNA helicase RuvB 0.35 19
Azospirillum sp. SherDot2 0.34 MPMX19_01610 ATP-dependent DNA helicase PcrA 0.60 MPMX19_00698 Holliday junction ATP-dependent DNA helicase RuvB
Magnetospirillum magneticum AMB-1 0.34 AMB_RS03725 DNA helicase II 0.59 AMB_RS16245 Holliday junction branch migration DNA helicase RuvB
Dinoroseobacter shibae DFL-12 0.33 Dshi_2483 UvrD/REP helicase (RefSeq) 0.57 Dshi_1105 Holliday junction DNA helicase RuvB (RefSeq)
Echinicola vietnamensis KMM 6221, DSM 17526 0.33 Echvi_0292 Superfamily I DNA and RNA helicases 0.57 Echvi_0825 Holliday junction DNA helicase, RuvB subunit
Mycobacterium tuberculosis H37Rv 0.33 Rv0949 Probable ATP-dependent DNA helicase II UvrD1 0.54 Rv2592c Probable holliday junction DNA helicase RuvB
Rhizobium sp. OAE497 0.33 ABIE40_RS11670 UvrD-helicase domain-containing protein 0.59 ABIE40_RS15760 Holliday junction branch migration DNA helicase RuvB 0.31 103
Brevundimonas sp. GW460-12-10-14-LB2 0.32 A4249_RS04960 UvrD-helicase domain-containing protein 0.58 A4249_RS15865 Holliday junction branch migration DNA helicase RuvB low > 48
Rhodospirillum rubrum S1H 0.32 Rru_A1536 UvrD/REP helicase (NCBI) 0.61 Rru_A1089 Holliday junction DNA helicase RuvB (NCBI)
Sinorhizobium meliloti 1021 0.31 SMc01461 DNA helicase II protein 0.61 SMc03965 Holliday junction DNA helicase RuvB
Bacteroides thetaiotaomicron VPI-5482 0.31 BT0657 ATP-dependent DNA helicase (NCBI ptt file) 0.57 BT3285 Holliday junction DNA helicase ruvB (NCBI ptt file)
Pedobacter sp. GW460-11-11-14-LB5 0.31 CA265_RS12980 ATP-dependent DNA helicase 0.57 CA265_RS07710 Holliday junction branch migration DNA helicase RuvB
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_07795 ATP-dependent DNA helicase 0.59 CA264_19800 Holliday junction branch migration DNA helicase RuvB
Bacteroides ovatus ATCC 8483 0.31 BACOVA_02365 UvrD/REP helicase 0.57 BACOVA_00895 Holliday junction DNA helicase RuvB
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS07840 ATP-dependent helicase 0.58 ABZR88_RS07990 Holliday junction branch migration DNA helicase RuvB
Parabacteroides merdae CL09T00C40 0.31 HMPREF1078_RS03560 3'-5' exonuclease 0.57 HMPREF1078_RS06175 Holliday junction branch migration DNA helicase RuvB 0.88 13
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS17735 UvrD-helicase domain-containing protein 0.57 ABI39_RS04970 Holliday junction branch migration DNA helicase RuvB
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS03305 UvrD-helicase domain-containing protein 0.57 HMPREF1058_RS11890 Holliday junction branch migration DNA helicase RuvB low > 67
Synechocystis sp000284455 PCC 6803 0.30 SGL_RS06660 DNA helicase PcrA 0.52 SGL_RS14255 Holliday junction branch migration DNA helicase RuvB
Cellulophaga baltica 18 0.30 M666_RS15390 3'-5' exonuclease 0.58 M666_RS07660 Holliday junction branch migration DNA helicase RuvB
Fusobacterium nucleatum SB010 0.29 HUW76_07175 UvrD-helicase domain-containing protein 0.59 HUW76_04170 Holliday junction branch migration DNA helicase RuvB low > 35
Bacteroides stercoris CC31F 0.29 HMPREF1181_RS16505 UvrD-helicase domain-containing protein 0.57 HMPREF1181_RS02130 Holliday junction branch migration DNA helicase RuvB low > 56
Synechococcus elongatus PCC 7942 0.29 Synpcc7942_2168 pcrA ATP-dependent DNA helicase, Rep family 0.56 Synpcc7942_0835 ruvB Holliday junction DNA helicase B
Desulfovibrio vulgaris Hildenborough JW710 0.19 DVU0156 pcrA ATP-dependent DNA helicase, UvrD/REP family (TIGR) 0.58 DVU2255 ruvB Holliday junction DNA helicase RuvB (TIGR) 0.34 18
Desulfovibrio vulgaris Miyazaki F 0.17 DvMF_1967 UvrD/REP helicase (RefSeq) 0.59 DvMF_3205 ruvB Holliday junction DNA helicase RuvB (RefSeq) 0.55 7

Not shown: 0 genomes with orthologs for CSW01_01015 only; 9 genomes with orthologs for CSW01_09240 only